RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
PTCD2-212ENST00000543322 LRP1Q07954 4544 aaKnown RBP6.65□□□□□ -1.34
PTCD2-212ENST00000543322 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-212ENST00000543322 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-212ENST00000543322 XP32Q5T750 250 aa6.6□□□□□ -1.35
PTCD2-212ENST00000543322 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
PTCD2-212ENST00000543322 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.36
PTCD2-212ENST00000543322 S4R3F8 94 aa6.58□□□□□ -1.36
PTCD2-212ENST00000543322 Q5VSD8 79 aa6.55□□□□□ -1.36
PTCD2-212ENST00000543322 ROMO1P60602 79 aa6.55□□□□□ -1.36
PTCD2-212ENST00000543322 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
PTCD2-212ENST00000543322 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
PTCD2-212ENST00000543322 A0A0D9SG42 100 aa6.49□□□□□ -1.37
PTCD2-212ENST00000543322 DMBT1Q9UGM3 2413 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-212ENST00000543322 P0C880 135 aa6.47□□□□□ -1.37
PTCD2-212ENST00000543322 RYR1P21817 5038 aa6.46□□□□□ -1.38
PTCD2-212ENST00000543322 MYCBP2O75592 4640 aa6.46□□□□□ -1.38
PTCD2-212ENST00000543322 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
PTCD2-212ENST00000543322 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
PTCD2-212ENST00000543322 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
PTCD2-212ENST00000543322 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
PTCD2-212ENST00000543322 H3BS24 57 aa6.36□□□□□ -1.39
PTCD2-212ENST00000543322 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
PTCD2-212ENST00000543322 RYR3Q15413 4870 aa6.31□□□□□ -1.4
PTCD2-212ENST00000543322 LPAP08519 4548 aa6.29□□□□□ -1.4
PTCD2-212ENST00000543322 M0QZ58 72 aa6.29□□□□□ -1.4
PTCD2-212ENST00000543322 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
PTCD2-212ENST00000543322 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
PTCD2-212ENST00000543322 LRP2P98164 4655 aa6.26□□□□□ -1.41
PTCD2-212ENST00000543322 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
PTCD2-212ENST00000543322 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
PTCD2-212ENST00000543322 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
PTCD2-212ENST00000543322 R4GN34 69 aa6.08□□□□□ -1.44
PTCD2-212ENST00000543322 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
PTCD2-212ENST00000543322 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
PTCD2-212ENST00000543322 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
PTCD2-212ENST00000543322 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
PTCD2-212ENST00000543322 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
PTCD2-212ENST00000543322 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
PTCD2-212ENST00000543322 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
PTCD2-212ENST00000543322 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
PTCD2-212ENST00000543322 J3QL48 77 aa5.83□□□□□ -1.48
PTCD2-212ENST00000543322 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
PTCD2-212ENST00000543322 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
PTCD2-212ENST00000543322 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
PTCD2-212ENST00000543322 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
PTCD2-212ENST00000543322 HERC2O95714 4834 aa5.76□□□□□ -1.49
PTCD2-212ENST00000543322 HERC1Q15751 4861 aa5.75□□□□□ -1.49
PTCD2-212ENST00000543322 BIRC6Q9NR09 4857 aa5.75□□□□□ -1.49
PTCD2-212ENST00000543322 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
PTCD2-212ENST00000543322 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
PTCD2-212ENST00000543322 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
PTCD2-212ENST00000543322 TNP1P09430 55 aa5.59□□□□□ -1.51
PTCD2-212ENST00000543322 MUC2Q02817 5179 aa5.58□□□□□ -1.52
PTCD2-212ENST00000543322 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
PTCD2-212ENST00000543322 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
PTCD2-212ENST00000543322 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
PTCD2-212ENST00000543322 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
PTCD2-212ENST00000543322 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
PTCD2-212ENST00000543322 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
PTCD2-212ENST00000543322 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
PTCD2-212ENST00000543322 MT1HP80294 61 aa5.36□□□□□ -1.55
PTCD2-212ENST00000543322 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.55
PTCD2-212ENST00000543322 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
PTCD2-212ENST00000543322 M0R2T5 61 aa5.31□□□□□ -1.56
PTCD2-212ENST00000543322 MT2AP02795 61 aa5.31□□□□□ -1.56
PTCD2-212ENST00000543322 MT1FP04733 61 aa5.31□□□□□ -1.56
PTCD2-212ENST00000543322 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
PTCD2-212ENST00000543322 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
PTCD2-212ENST00000543322 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
PTCD2-212ENST00000543322 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
PTCD2-212ENST00000543322 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
PTCD2-212ENST00000543322 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
PTCD2-212ENST00000543322 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
PTCD2-212ENST00000543322 MT1BP07438 61 aa5.17□□□□□ -1.58
PTCD2-212ENST00000543322 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
PTCD2-212ENST00000543322 MT1XP80297 61 aa5.16□□□□□ -1.58
PTCD2-212ENST00000543322 LCE2BO14633 110 aa5.14□□□□□ -1.59
PTCD2-212ENST00000543322 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
PTCD2-212ENST00000543322 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
PTCD2-212ENST00000543322 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
PTCD2-212ENST00000543322 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
PTCD2-212ENST00000543322 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
PTCD2-212ENST00000543322 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
PTCD2-212ENST00000543322 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
PTCD2-212ENST00000543322 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
PTCD2-212ENST00000543322 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
PTCD2-212ENST00000543322 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
PTCD2-212ENST00000543322 INE1O15225 51 aa4.85□□□□□ -1.63
PTCD2-212ENST00000543322 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
PTCD2-212ENST00000543322 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
PTCD2-212ENST00000543322 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
PTCD2-212ENST00000543322 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
PTCD2-212ENST00000543322 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
PTCD2-212ENST00000543322 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
PTCD2-212ENST00000543322 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
PTCD2-212ENST00000543322 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
PTCD2-212ENST00000543322 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
PTCD2-212ENST00000543322 KMT2DO14686 5537 aa4.57□□□□□ -1.68
PTCD2-212ENST00000543322 USH2AO75445 5202 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms