RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 PCP4P48539 62 aa7.92□□□□□ -1.14
TRIM65-204ENST00000543309 MT1HP80294 61 aa7.88□□□□□ -1.15
TRIM65-204ENST00000543309 ACYP2P14621 99 aa7.87□□□□□ -1.15
TRIM65-204ENST00000543309 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
TRIM65-204ENST00000543309 ATP5EP56381 51 aaPredicted RBP7.84□□□□□ -1.15
TRIM65-204ENST00000543309 S4R3F8 94 aa7.84□□□□□ -1.15
TRIM65-204ENST00000543309 TMEM258P61165 79 aa7.83□□□□□ -1.16
TRIM65-204ENST00000543309 LCA10Q71F78 164 aa7.8□□□□□ -1.16
TRIM65-204ENST00000543309 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
TRIM65-204ENST00000543309 M0R2T5 61 aa7.76□□□□□ -1.17
TRIM65-204ENST00000543309 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
TRIM65-204ENST00000543309 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
TRIM65-204ENST00000543309 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
TRIM65-204ENST00000543309 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
TRIM65-204ENST00000543309 COA5Q86WW8 74 aa7.71□□□□□ -1.18
TRIM65-204ENST00000543309 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
TRIM65-204ENST00000543309 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
TRIM65-204ENST00000543309 H0YAA0 97 aa7.57□□□□□ -1.2
TRIM65-204ENST00000543309 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
TRIM65-204ENST00000543309 SSPOA2VEC9 5147 aa7.52□□□□□ -1.21
TRIM65-204ENST00000543309 USH2AO75445 5202 aa7.51□□□□□ -1.21
TRIM65-204ENST00000543309 MT2AP02795 61 aa7.49□□□□□ -1.21
TRIM65-204ENST00000543309 KRTAP9-7A8MTY7 169 aa7.46□□□□□ -1.22
TRIM65-204ENST00000543309 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
TRIM65-204ENST00000543309 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
TRIM65-204ENST00000543309 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
TRIM65-204ENST00000543309 MT1FP04733 61 aa7.43□□□□□ -1.22
TRIM65-204ENST00000543309 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
TRIM65-204ENST00000543309 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
TRIM65-204ENST00000543309 SEC61GP60059 68 aa7.37□□□□□ -1.23
TRIM65-204ENST00000543309 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
TRIM65-204ENST00000543309 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
TRIM65-204ENST00000543309 P0C880 135 aa7.34□□□□□ -1.23
TRIM65-204ENST00000543309 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
TRIM65-204ENST00000543309 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
TRIM65-204ENST00000543309 A0A1B0GU69 56 aa7.3□□□□□ -1.24
TRIM65-204ENST00000543309 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
TRIM65-204ENST00000543309 V9GYY9 64 aa7.3□□□□□ -1.24
TRIM65-204ENST00000543309 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
TRIM65-204ENST00000543309 Q1T7F1 81 aa7.27□□□□□ -1.25
TRIM65-204ENST00000543309 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
TRIM65-204ENST00000543309 R4GN34 69 aa7.22□□□□□ -1.25
TRIM65-204ENST00000543309 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
TRIM65-204ENST00000543309 M0QZ58 72 aa7.2□□□□□ -1.26
TRIM65-204ENST00000543309 LCE2BO14633 110 aa7.2□□□□□ -1.26
TRIM65-204ENST00000543309 A0A1B0GU33 70 aa7.18□□□□□ -1.26
TRIM65-204ENST00000543309 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
TRIM65-204ENST00000543309 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
TRIM65-204ENST00000543309 Q5VV11 94 aa7.12□□□□□ -1.27
TRIM65-204ENST00000543309 PSPHP1O15172 72 aa7.1□□□□□ -1.27
TRIM65-204ENST00000543309 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
TRIM65-204ENST00000543309 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
TRIM65-204ENST00000543309 UQCR11O14957 56 aa7.05□□□□□ -1.28
TRIM65-204ENST00000543309 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
TRIM65-204ENST00000543309 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
TRIM65-204ENST00000543309 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
TRIM65-204ENST00000543309 A6NN06 94 aa7□□□□□ -1.29
TRIM65-204ENST00000543309 MT1BP07438 61 aa6.98□□□□□ -1.29
TRIM65-204ENST00000543309 A0A0D9SG42 100 aa6.92□□□□□ -1.3
TRIM65-204ENST00000543309 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
TRIM65-204ENST00000543309 A6NED7 52 aa6.91□□□□□ -1.3
TRIM65-204ENST00000543309 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
TRIM65-204ENST00000543309 A8MU10 97 aa6.88□□□□□ -1.31
TRIM65-204ENST00000543309 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
TRIM65-204ENST00000543309 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
TRIM65-204ENST00000543309 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
TRIM65-204ENST00000543309 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
TRIM65-204ENST00000543309 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
TRIM65-204ENST00000543309 NEBP20929 6669 aa6.78□□□□□ -1.32
TRIM65-204ENST00000543309 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
TRIM65-204ENST00000543309 CAMK2N1Q7Z7J9 78 aa6.71□□□□□ -1.34
TRIM65-204ENST00000543309 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
TRIM65-204ENST00000543309 K7ERS5 55 aa6.7□□□□□ -1.34
TRIM65-204ENST00000543309 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
TRIM65-204ENST00000543309 MT1XP80297 61 aa6.69□□□□□ -1.34
TRIM65-204ENST00000543309 BRK1Q8WUW1 75 aa6.59□□□□□ -1.35
TRIM65-204ENST00000543309 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
TRIM65-204ENST00000543309 MDN1Q9NU22 5596 aa6.5□□□□□ -1.37
TRIM65-204ENST00000543309 KMT2DO14686 5537 aa6.48□□□□□ -1.37
TRIM65-204ENST00000543309 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
TRIM65-204ENST00000543309 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
TRIM65-204ENST00000543309 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
TRIM65-204ENST00000543309 KRTAP10-7P60409 375 aaPredicted RBP6.38□□□□□ -1.39
TRIM65-204ENST00000543309 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
TRIM65-204ENST00000543309 TNP1P09430 55 aa6.36□□□□□ -1.39
TRIM65-204ENST00000543309 ROMO1P60602 79 aa6.35□□□□□ -1.39
TRIM65-204ENST00000543309 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
TRIM65-204ENST00000543309 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
TRIM65-204ENST00000543309 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
TRIM65-204ENST00000543309 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
TRIM65-204ENST00000543309 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
TRIM65-204ENST00000543309 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
TRIM65-204ENST00000543309 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
TRIM65-204ENST00000543309 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
TRIM65-204ENST00000543309 SPRR2EP22531 72 aa6.15□□□□□ -1.42
TRIM65-204ENST00000543309 SPRR2BP35325 72 aa6.15□□□□□ -1.42
TRIM65-204ENST00000543309 SPRR2AP35326 72 aa6.15□□□□□ -1.42
TRIM65-204ENST00000543309 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
TRIM65-204ENST00000543309 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
TRIM65-204ENST00000543309 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms