RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
CLPB-212ENST00000543042 LCA10Q71F78 164 aa9.12□□□□□ -0.95
CLPB-212ENST00000543042 HERC1Q15751 4861 aa9.11□□□□□ -0.95
CLPB-212ENST00000543042 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
CLPB-212ENST00000543042 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
CLPB-212ENST00000543042 KRTAP4-1Q9BYQ7 146 aa9.01□□□□□ -0.97
CLPB-212ENST00000543042 MUC17Q685J3 4493 aa9□□□□□ -0.97
CLPB-212ENST00000543042 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
CLPB-212ENST00000543042 S4R3F8 94 aa8.98□□□□□ -0.97
CLPB-212ENST00000543042 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
CLPB-212ENST00000543042 SEC61GP60059 68 aa8.97□□□□□ -0.97
CLPB-212ENST00000543042 MUC2Q02817 5179 aa8.97□□□□□ -0.97
CLPB-212ENST00000543042 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
CLPB-212ENST00000543042 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
CLPB-212ENST00000543042 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
CLPB-212ENST00000543042 UQCR11O14957 56 aa8.9□□□□□ -0.98
CLPB-212ENST00000543042 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
CLPB-212ENST00000543042 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
CLPB-212ENST00000543042 A0A1B0GU33 70 aa8.82□□□□□ -1
CLPB-212ENST00000543042 KRTAP10-6P60371 365 aaPredicted RBP8.81□□□□□ -1
CLPB-212ENST00000543042 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
CLPB-212ENST00000543042 H0YAA0 97 aa8.79□□□□□ -1
CLPB-212ENST00000543042 PMAIP1Q13794 54 aa8.79□□□□□ -1
CLPB-212ENST00000543042 P0C880 135 aa8.74□□□□□ -1.01
CLPB-212ENST00000543042 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
CLPB-212ENST00000543042 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
CLPB-212ENST00000543042 A6NN06 94 aa8.69□□□□□ -1.02
CLPB-212ENST00000543042 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
CLPB-212ENST00000543042 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
CLPB-212ENST00000543042 UBR4Q5T4S7 5183 aa8.64□□□□□ -1.03
CLPB-212ENST00000543042 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
CLPB-212ENST00000543042 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
CLPB-212ENST00000543042 A0A0D9SG42 100 aa8.54□□□□□ -1.04
CLPB-212ENST00000543042 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
CLPB-212ENST00000543042 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
CLPB-212ENST00000543042 KTN1-AS1Q86SY8 53 aa8.44□□□□□ -1.06
CLPB-212ENST00000543042 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
CLPB-212ENST00000543042 M0QZ58 72 aa8.34□□□□□ -1.07
CLPB-212ENST00000543042 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
CLPB-212ENST00000543042 PRAC1Q96KF2 57 aa8.32□□□□□ -1.08
CLPB-212ENST00000543042 R4GN34 69 aa8.31□□□□□ -1.08
CLPB-212ENST00000543042 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
CLPB-212ENST00000543042 K7ERS5 55 aa8.3□□□□□ -1.08
CLPB-212ENST00000543042 KRTAP12-1P59990 96 aa8.27□□□□□ -1.09
CLPB-212ENST00000543042 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
CLPB-212ENST00000543042 MT1HP80294 61 aa8.21□□□□□ -1.09
CLPB-212ENST00000543042 M0R2T5 61 aa8.17□□□□□ -1.1
CLPB-212ENST00000543042 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
CLPB-212ENST00000543042 ROMO1P60602 79 aa8.09□□□□□ -1.11
CLPB-212ENST00000543042 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
CLPB-212ENST00000543042 MT2AP02795 61 aa7.96□□□□□ -1.13
CLPB-212ENST00000543042 MT1FP04733 61 aa7.96□□□□□ -1.14
CLPB-212ENST00000543042 KRTAP10-10P60014 251 aa7.91□□□□□ -1.14
CLPB-212ENST00000543042 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
CLPB-212ENST00000543042 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
CLPB-212ENST00000543042 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
CLPB-212ENST00000543042 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
CLPB-212ENST00000543042 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
CLPB-212ENST00000543042 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
CLPB-212ENST00000543042 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
CLPB-212ENST00000543042 KRTAP9-3Q9BYQ3 159 aa7.65□□□□□ -1.18
CLPB-212ENST00000543042 KRTAP19-8Q3LI54 63 aa7.6□□□□□ -1.19
CLPB-212ENST00000543042 MT1BP07438 61 aa7.57□□□□□ -1.2
CLPB-212ENST00000543042 LCE2BO14633 110 aa7.45□□□□□ -1.22
CLPB-212ENST00000543042 USH2AO75445 5202 aa7.45□□□□□ -1.22
CLPB-212ENST00000543042 TNP1P09430 55 aa7.43□□□□□ -1.22
CLPB-212ENST00000543042 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
CLPB-212ENST00000543042 MT1XP80297 61 aa7.39□□□□□ -1.23
CLPB-212ENST00000543042 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
CLPB-212ENST00000543042 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
CLPB-212ENST00000543042 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
CLPB-212ENST00000543042 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
CLPB-212ENST00000543042 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
CLPB-212ENST00000543042 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
CLPB-212ENST00000543042 FSIP2Q5CZC0 6907 aa7.1□□□□□ -1.27
CLPB-212ENST00000543042 KRTAP10-12P60413 245 aa7.04□□□□□ -1.28
CLPB-212ENST00000543042 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
CLPB-212ENST00000543042 KMT2DO14686 5537 aa7.03□□□□□ -1.28
CLPB-212ENST00000543042 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
CLPB-212ENST00000543042 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
CLPB-212ENST00000543042 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
CLPB-212ENST00000543042 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
CLPB-212ENST00000543042 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
CLPB-212ENST00000543042 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
CLPB-212ENST00000543042 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
CLPB-212ENST00000543042 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
CLPB-212ENST00000543042 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.34
CLPB-212ENST00000543042 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
CLPB-212ENST00000543042 H3BS24 57 aa6.63□□□□□ -1.35
CLPB-212ENST00000543042 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
CLPB-212ENST00000543042 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
CLPB-212ENST00000543042 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
CLPB-212ENST00000543042 MT1EP04732 61 aa6.43□□□□□ -1.38
CLPB-212ENST00000543042 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
CLPB-212ENST00000543042 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
CLPB-212ENST00000543042 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
CLPB-212ENST00000543042 MT1LQ93083 61 aa6.35□□□□□ -1.39
CLPB-212ENST00000543042 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
CLPB-212ENST00000543042 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
CLPB-212ENST00000543042 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms