RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
NELFA-216ENST00000542778 K7ERS5 55 aa9.16□□□□□ -0.94
NELFA-216ENST00000542778 MYCBP2O75592 4640 aa9.16□□□□□ -0.94
NELFA-216ENST00000542778 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
NELFA-216ENST00000542778 TNXBP22105 4242 aa9.15□□□□□ -0.94
NELFA-216ENST00000542778 Q5VSD8 79 aa9.13□□□□□ -0.95
NELFA-216ENST00000542778 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
NELFA-216ENST00000542778 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
NELFA-216ENST00000542778 DMBT1Q9UGM3 2413 aaPredicted RBP9□□□□□ -0.97
NELFA-216ENST00000542778 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
NELFA-216ENST00000542778 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
NELFA-216ENST00000542778 C9orf92A6NGG3 77 aa8.96□□□□□ -0.98
NELFA-216ENST00000542778 C20orf166-AS1Q96NR2 134 aa8.95□□□□□ -0.98
NELFA-216ENST00000542778 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
NELFA-216ENST00000542778 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
NELFA-216ENST00000542778 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
NELFA-216ENST00000542778 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
NELFA-216ENST00000542778 KRTAP15-1Q3LI76 137 aa8.87□□□□□ -0.99
NELFA-216ENST00000542778 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
NELFA-216ENST00000542778 NDUFAF8A1L188 74 aa8.86□□□□□ -0.99
NELFA-216ENST00000542778 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
NELFA-216ENST00000542778 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
NELFA-216ENST00000542778 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
NELFA-216ENST00000542778 MT1HL1P0DM35 61 aa8.83□□□□□ -1
NELFA-216ENST00000542778 A0A0D9SG42 100 aa8.82□□□□□ -1
NELFA-216ENST00000542778 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
NELFA-216ENST00000542778 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
NELFA-216ENST00000542778 LPAP08519 4548 aa8.7□□□□□ -1.02
NELFA-216ENST00000542778 HERC2O95714 4834 aa8.69□□□□□ -1.02
NELFA-216ENST00000542778 BIRC6Q9NR09 4857 aa8.67□□□□□ -1.02
NELFA-216ENST00000542778 S4R3F8 94 aa8.65□□□□□ -1.02
NELFA-216ENST00000542778 LRP2P98164 4655 aa8.64□□□□□ -1.03
NELFA-216ENST00000542778 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
NELFA-216ENST00000542778 XP32Q5T750 250 aa8.58□□□□□ -1.04
NELFA-216ENST00000542778 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
NELFA-216ENST00000542778 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
NELFA-216ENST00000542778 HERC1Q15751 4861 aa8.4□□□□□ -1.06
NELFA-216ENST00000542778 J3QL48 77 aa8.4□□□□□ -1.07
NELFA-216ENST00000542778 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
NELFA-216ENST00000542778 MUC2Q02817 5179 aa8.28□□□□□ -1.08
NELFA-216ENST00000542778 M0QZ58 72 aa8.26□□□□□ -1.09
NELFA-216ENST00000542778 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
NELFA-216ENST00000542778 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
NELFA-216ENST00000542778 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
NELFA-216ENST00000542778 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
NELFA-216ENST00000542778 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
NELFA-216ENST00000542778 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
NELFA-216ENST00000542778 UBR4Q5T4S7 5183 aa7.98□□□□□ -1.13
NELFA-216ENST00000542778 RNF213Q63HN8 5207 aa7.95□□□□□ -1.14
NELFA-216ENST00000542778 R4GN34 69 aa7.94□□□□□ -1.14
NELFA-216ENST00000542778 KRTAP19-2Q3LHN2 52 aa7.89□□□□□ -1.15
NELFA-216ENST00000542778 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
NELFA-216ENST00000542778 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
NELFA-216ENST00000542778 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
NELFA-216ENST00000542778 FLGP20930 4061 aaPredicted RBP7.77□□□□□ -1.17
NELFA-216ENST00000542778 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
NELFA-216ENST00000542778 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
NELFA-216ENST00000542778 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
NELFA-216ENST00000542778 MT1HP80294 61 aa7.43□□□□□ -1.22
NELFA-216ENST00000542778 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
NELFA-216ENST00000542778 TNP1P09430 55 aa7.39□□□□□ -1.23
NELFA-216ENST00000542778 M0R2T5 61 aa7.37□□□□□ -1.23
NELFA-216ENST00000542778 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
NELFA-216ENST00000542778 MT1FP04733 61 aa7.2□□□□□ -1.26
NELFA-216ENST00000542778 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
NELFA-216ENST00000542778 MT2AP02795 61 aa7.19□□□□□ -1.26
NELFA-216ENST00000542778 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
NELFA-216ENST00000542778 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
NELFA-216ENST00000542778 INE1O15225 51 aa7.07□□□□□ -1.28
NELFA-216ENST00000542778 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
NELFA-216ENST00000542778 LCE3AQ5TA76 89 aa6.96□□□□□ -1.29
NELFA-216ENST00000542778 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
NELFA-216ENST00000542778 USH2AO75445 5202 aa6.91□□□□□ -1.3
NELFA-216ENST00000542778 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
NELFA-216ENST00000542778 MT1BP07438 61 aa6.83□□□□□ -1.32
NELFA-216ENST00000542778 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
NELFA-216ENST00000542778 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
NELFA-216ENST00000542778 LCE2BO14633 110 aa6.76□□□□□ -1.33
NELFA-216ENST00000542778 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
NELFA-216ENST00000542778 MT1XP80297 61 aa6.66□□□□□ -1.34
NELFA-216ENST00000542778 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
NELFA-216ENST00000542778 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
NELFA-216ENST00000542778 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
NELFA-216ENST00000542778 KMT2DO14686 5537 aa6.52□□□□□ -1.37
NELFA-216ENST00000542778 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
NELFA-216ENST00000542778 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
NELFA-216ENST00000542778 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
NELFA-216ENST00000542778 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
NELFA-216ENST00000542778 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
NELFA-216ENST00000542778 LCE3CQ5T5A8 94 aa6.24□□□□□ -1.41
NELFA-216ENST00000542778 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
NELFA-216ENST00000542778 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.43
NELFA-216ENST00000542778 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
NELFA-216ENST00000542778 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
NELFA-216ENST00000542778 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
NELFA-216ENST00000542778 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
NELFA-216ENST00000542778 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
NELFA-216ENST00000542778 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
NELFA-216ENST00000542778 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
NELFA-216ENST00000542778 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms