RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 DEFB105AQ8NG35 78 aa1.21□□□□□ -2.22
LDHB-209ENST00000542765 SPRR4Q96PI1 79 aa1.21□□□□□ -2.22
LDHB-209ENST00000542765 DSCR8Q96T75 97 aa1.21□□□□□ -2.22
LDHB-209ENST00000542765 LAMTOR3Q9UHA4 124 aa1.21□□□□□ -2.22
LDHB-209ENST00000542765 LRP1Q07954 4544 aaKnown RBP1.2□□□□□ -2.22
LDHB-209ENST00000542765 A0A087WVE0 104 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 BCE1O60756 84 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 CRYGAP11844 174 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 PDE6GP18545 87 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 UBE2BP63146 152 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 LINC01554Q52M75 96 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 C1orf137Q5JT78 98 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 LINC00474Q9P2X8 69 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 SNURFQ9Y675 71 aa1.2□□□□□ -2.22
LDHB-209ENST00000542765 FAM236AA0A1B0GUQ0 79 aa1.19□□□□□ -2.22
LDHB-209ENST00000542765 FAM236BA0A1B0GV22 79 aa1.19□□□□□ -2.22
LDHB-209ENST00000542765 RYR1P21817 5038 aa1.19□□□□□ -2.22
LDHB-209ENST00000542765 UBL5Q9BZL1 73 aa1.19□□□□□ -2.22
LDHB-209ENST00000542765 EPPK1P58107 5090 aaKnown RBP1.18□□□□□ -2.22
LDHB-209ENST00000542765 LCE6AA0A183 80 aa1.18□□□□□ -2.22
LDHB-209ENST00000542765 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
LDHB-209ENST00000542765 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
LDHB-209ENST00000542765 HAMPP81172 84 aa1.18□□□□□ -2.22
LDHB-209ENST00000542765 ATP5EP2Q5VTU8 51 aa1.18□□□□□ -2.22
LDHB-209ENST00000542765 Q96NJ1 140 aa1.18□□□□□ -2.22
LDHB-209ENST00000542765 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 A0A087WSZ3 146 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 ATOX1O00244 68 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 COX7CP15954 63 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 RPL37AP61513 92 aaKnown RBP1.17□□□□□ -2.22
LDHB-209ENST00000542765 NREPQ16612 68 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 CYSTM1Q9H1C7 97 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
LDHB-209ENST00000542765 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 F8WEM9 126 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 K7EQZ3 153 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 UQCRQO14949 82 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 ASB16-AS1Q495Z4 193 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 SERP2Q8N6R1 65 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 DPH3Q96FX2 82 aa1.16□□□□□ -2.22
LDHB-209ENST00000542765 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
LDHB-209ENST00000542765 C9orf153Q5TBE3 101 aa1.15□□□□□ -2.23
LDHB-209ENST00000542765 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
LDHB-209ENST00000542765 PRR15Q8IV56 129 aa1.15□□□□□ -2.23
LDHB-209ENST00000542765 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
LDHB-209ENST00000542765 HCG22E2RYF7 251 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 SMR3BP02814 79 aaPredicted RBP1.14□□□□□ -2.23
LDHB-209ENST00000542765 KLKP1Q107X0 134 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 Q5XG85 94 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 SPINK6Q6UWN8 80 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 HRCT1Q6UXD1 115 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 LPAP08519 4548 aa1.14□□□□□ -2.23
LDHB-209ENST00000542765 H7BZZ5 65 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 J3KT08 172 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 WFDC13Q8IUB5 93 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 C20orf197Q8N268 126 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 SMIM20Q8N5G0 67 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 SS18L2Q9UHA2 77 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 ABCA13Q86UQ4 5058 aa1.13□□□□□ -2.23
LDHB-209ENST00000542765 KIAA1109Q2LD37 5005 aa1.12□□□□□ -2.23
LDHB-209ENST00000542765 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
LDHB-209ENST00000542765 CASC2Q6XLA1 102 aa1.12□□□□□ -2.23
LDHB-209ENST00000542765 MRPL34Q9BQ48 92 aaKnown RBP1.12□□□□□ -2.23
LDHB-209ENST00000542765 HERC2O95714 4834 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 BIRC6Q9NR09 4857 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 hDV103S1A0JD37 113 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 NDUFB1O75438 58 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 SPINK1P00995 79 aa1.11□□□□□ -2.23
LDHB-209ENST00000542765 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
LDHB-209ENST00000542765 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 H0Y9P7 68 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 NDUFC1O43677 76 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 MT1HL1P0DM35 61 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 RPS28P62857 69 aaKnown RBP1.1□□□□□ -2.23
LDHB-209ENST00000542765 Q5VSD8 79 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 LIMD2Q9BT23 127 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 TP53AIP1Q9HCN2 124 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 LRP2P98164 4655 aa1.1□□□□□ -2.23
LDHB-209ENST00000542765 SPAG11AQ6PDA7 123 aa1.09□□□□□ -2.23
LDHB-209ENST00000542765 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
LDHB-209ENST00000542765 CYP4F30PQ9H0H9 118 aa1.09□□□□□ -2.23
LDHB-209ENST00000542765 ATP5EP56381 51 aaPredicted RBP1.08□□□□□ -2.24
LDHB-209ENST00000542765 RETNLBQ9BQ08 111 aa1.08□□□□□ -2.24
LDHB-209ENST00000542765 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
LDHB-209ENST00000542765 FLGP20930 4061 aaPredicted RBP1.08□□□□□ -2.24
LDHB-209ENST00000542765 LOC101927531A0A1B0GV80 90 aa1.06□□□□□ -2.24
LDHB-209ENST00000542765 C9orf92A6NGG3 77 aa1.06□□□□□ -2.24
LDHB-209ENST00000542765 CDC42SE1Q9NRR8 79 aa1.06□□□□□ -2.24
LDHB-209ENST00000542765 DMAC1Q96GE9 116 aa1.05□□□□□ -2.24
LDHB-209ENST00000542765 ROMO1P60602 79 aa1.04□□□□□ -2.24
LDHB-209ENST00000542765 RPL37P61927 97 aaKnown RBP1.04□□□□□ -2.24
LDHB-209ENST00000542765 HERC1Q15751 4861 aa1.04□□□□□ -2.24
LDHB-209ENST00000542765 HMCN2Q8NDA2 5059 aa1.04□□□□□ -2.24
LDHB-209ENST00000542765 ACYP2P14621 99 aa1.03□□□□□ -2.24
LDHB-209ENST00000542765 SPINK7P58062 85 aa1.03□□□□□ -2.24
LDHB-209ENST00000542765 DMBT1Q9UGM3 2413 aaPredicted RBP1.03□□□□□ -2.25
LDHB-209ENST00000542765 INE1O15225 51 aa1.02□□□□□ -2.25
LDHB-209ENST00000542765 Q5VV11 94 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms