RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
AC005840.3-201ENST00000541888 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
AC005840.3-201ENST00000541888 LCA10Q71F78 164 aa4.42□□□□□ -1.7
AC005840.3-201ENST00000541888 SSBP3-AS1Q7Z2R9 100 aa4.42□□□□□ -1.7
AC005840.3-201ENST00000541888 HERC2O95714 4834 aa4.41□□□□□ -1.7
AC005840.3-201ENST00000541888 A8MWP4 228 aa4.41□□□□□ -1.7
AC005840.3-201ENST00000541888 LINC00304Q8N9R0 145 aa4.41□□□□□ -1.7
AC005840.3-201ENST00000541888 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
AC005840.3-201ENST00000541888 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
AC005840.3-201ENST00000541888 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.7
AC005840.3-201ENST00000541888 A8MU10 97 aa4.39□□□□□ -1.71
AC005840.3-201ENST00000541888 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
AC005840.3-201ENST00000541888 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
AC005840.3-201ENST00000541888 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
AC005840.3-201ENST00000541888 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
AC005840.3-201ENST00000541888 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
AC005840.3-201ENST00000541888 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
AC005840.3-201ENST00000541888 ASB16-AS1Q495Z4 193 aa4.36□□□□□ -1.71
AC005840.3-201ENST00000541888 SPINK1P00995 79 aa4.35□□□□□ -1.71
AC005840.3-201ENST00000541888 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
AC005840.3-201ENST00000541888 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
AC005840.3-201ENST00000541888 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
AC005840.3-201ENST00000541888 LPAP08519 4548 aa4.3□□□□□ -1.72
AC005840.3-201ENST00000541888 SPAG11AQ6PDA7 123 aa4.3□□□□□ -1.72
AC005840.3-201ENST00000541888 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
AC005840.3-201ENST00000541888 SPINK7P58062 85 aa4.29□□□□□ -1.72
AC005840.3-201ENST00000541888 HRES1P13985 223 aa4.28□□□□□ -1.72
AC005840.3-201ENST00000541888 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
AC005840.3-201ENST00000541888 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
AC005840.3-201ENST00000541888 HERC1Q15751 4861 aa4.28□□□□□ -1.72
AC005840.3-201ENST00000541888 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
AC005840.3-201ENST00000541888 LINC00313P59037 77 aa4.25□□□□□ -1.73
AC005840.3-201ENST00000541888 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
AC005840.3-201ENST00000541888 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
AC005840.3-201ENST00000541888 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
AC005840.3-201ENST00000541888 ACYP2P14621 99 aa4.23□□□□□ -1.73
AC005840.3-201ENST00000541888 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
AC005840.3-201ENST00000541888 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
AC005840.3-201ENST00000541888 LRP2P98164 4655 aa4.21□□□□□ -1.74
AC005840.3-201ENST00000541888 Q5W150 140 aa4.2□□□□□ -1.74
AC005840.3-201ENST00000541888 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
AC005840.3-201ENST00000541888 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
AC005840.3-201ENST00000541888 A0A1B0GU69 56 aa4.17□□□□□ -1.74
AC005840.3-201ENST00000541888 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
AC005840.3-201ENST00000541888 UQCR11O14957 56 aa4.15□□□□□ -1.75
AC005840.3-201ENST00000541888 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
AC005840.3-201ENST00000541888 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
AC005840.3-201ENST00000541888 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 MUC2Q02817 5179 aa4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 A8MUU9 505 aa4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
AC005840.3-201ENST00000541888 TPRXLQ17RH7 258 aa4.09□□□□□ -1.76
AC005840.3-201ENST00000541888 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
AC005840.3-201ENST00000541888 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
AC005840.3-201ENST00000541888 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
AC005840.3-201ENST00000541888 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
AC005840.3-201ENST00000541888 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
AC005840.3-201ENST00000541888 MT3P25713 68 aa4.01□□□□□ -1.77
AC005840.3-201ENST00000541888 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
AC005840.3-201ENST00000541888 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
AC005840.3-201ENST00000541888 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
AC005840.3-201ENST00000541888 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
AC005840.3-201ENST00000541888 ROMO1P60602 79 aa3.94□□□□□ -1.78
AC005840.3-201ENST00000541888 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
AC005840.3-201ENST00000541888 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
AC005840.3-201ENST00000541888 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
AC005840.3-201ENST00000541888 H0YAA0 97 aa3.91□□□□□ -1.78
AC005840.3-201ENST00000541888 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
AC005840.3-201ENST00000541888 K7ERS5 55 aa3.88□□□□□ -1.79
AC005840.3-201ENST00000541888 H1FX-AS1Q4G0G2 97 aa3.88□□□□□ -1.79
AC005840.3-201ENST00000541888 A0A1B0GU33 70 aa3.87□□□□□ -1.79
AC005840.3-201ENST00000541888 COX6B2Q6YFQ2 88 aa3.86□□□□□ -1.79
AC005840.3-201ENST00000541888 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
AC005840.3-201ENST00000541888 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
AC005840.3-201ENST00000541888 S4R3F8 94 aa3.78□□□□□ -1.8
AC005840.3-201ENST00000541888 P0C880 135 aa3.77□□□□□ -1.81
AC005840.3-201ENST00000541888 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
AC005840.3-201ENST00000541888 MT1HP80294 61 aa3.7□□□□□ -1.82
AC005840.3-201ENST00000541888 M0R2T5 61 aa3.68□□□□□ -1.82
AC005840.3-201ENST00000541888 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
AC005840.3-201ENST00000541888 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
AC005840.3-201ENST00000541888 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
AC005840.3-201ENST00000541888 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
AC005840.3-201ENST00000541888 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
AC005840.3-201ENST00000541888 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
AC005840.3-201ENST00000541888 A0A0D9SG42 100 aa3.56□□□□□ -1.84
AC005840.3-201ENST00000541888 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
AC005840.3-201ENST00000541888 MT2AP02795 61 aa3.54□□□□□ -1.84
AC005840.3-201ENST00000541888 MT1FP04733 61 aa3.54□□□□□ -1.84
AC005840.3-201ENST00000541888 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
AC005840.3-201ENST00000541888 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
AC005840.3-201ENST00000541888 M0QZ58 72 aa3.51□□□□□ -1.85
AC005840.3-201ENST00000541888 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
AC005840.3-201ENST00000541888 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
AC005840.3-201ENST00000541888 R4GN34 69 aa3.49□□□□□ -1.85
AC005840.3-201ENST00000541888 USH2AO75445 5202 aa3.45□□□□□ -1.86
AC005840.3-201ENST00000541888 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
AC005840.3-201ENST00000541888 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms