RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 TP53AIP1Q9HCN2 124 aa5.25□□□□□ -1.57
SNHG1-216ENST00000541416 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SNHG1-216ENST00000541416 UBL5Q9BZL1 73 aa5.22□□□□□ -1.57
SNHG1-216ENST00000541416 A8MUN3 132 aa5.17□□□□□ -1.58
SNHG1-216ENST00000541416 H0YAA0 97 aa5.17□□□□□ -1.58
SNHG1-216ENST00000541416 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
SNHG1-216ENST00000541416 NDUFC1O43677 76 aa5.16□□□□□ -1.58
SNHG1-216ENST00000541416 SPRR2DP22532 72 aa5.16□□□□□ -1.58
SNHG1-216ENST00000541416 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
SNHG1-216ENST00000541416 BATFQ16520 125 aa5.15□□□□□ -1.59
SNHG1-216ENST00000541416 CYP4F30PQ9H0H9 118 aa5.15□□□□□ -1.59
SNHG1-216ENST00000541416 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
SNHG1-216ENST00000541416 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
SNHG1-216ENST00000541416 A0A1W2PPM0 123 aa5.13□□□□□ -1.59
SNHG1-216ENST00000541416 MT1XP80297 61 aa5.12□□□□□ -1.59
SNHG1-216ENST00000541416 A0A087WVE0 104 aa5.11□□□□□ -1.59
SNHG1-216ENST00000541416 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
SNHG1-216ENST00000541416 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SNHG1-216ENST00000541416 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
SNHG1-216ENST00000541416 TRAV22A0A0B4J277 110 aa5.07□□□□□ -1.6
SNHG1-216ENST00000541416 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
SNHG1-216ENST00000541416 PCP4L1A6NKN8 68 aa5.05□□□□□ -1.6
SNHG1-216ENST00000541416 TAX1BP3O14907 124 aa5.05□□□□□ -1.6
SNHG1-216ENST00000541416 SPCS1Q9Y6A9 102 aa5.05□□□□□ -1.6
SNHG1-216ENST00000541416 ACYP1P07311 99 aa5.04□□□□□ -1.6
SNHG1-216ENST00000541416 R4GN34 69 aa5.04□□□□□ -1.6
SNHG1-216ENST00000541416 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
SNHG1-216ENST00000541416 K7EP34 96 aa5.02□□□□□ -1.61
SNHG1-216ENST00000541416 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
SNHG1-216ENST00000541416 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
SNHG1-216ENST00000541416 H3BS24 57 aa4.99□□□□□ -1.61
SNHG1-216ENST00000541416 ATOX1O00244 68 aa4.99□□□□□ -1.61
SNHG1-216ENST00000541416 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
SNHG1-216ENST00000541416 M0QZ58 72 aa4.95□□□□□ -1.62
SNHG1-216ENST00000541416 H0Y9P7 68 aa4.94□□□□□ -1.62
SNHG1-216ENST00000541416 UQCRQO14949 82 aa4.94□□□□□ -1.62
SNHG1-216ENST00000541416 PRO0461Q9UI25 63 aa4.92□□□□□ -1.62
SNHG1-216ENST00000541416 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
SNHG1-216ENST00000541416 P0C880 135 aa4.88□□□□□ -1.63
SNHG1-216ENST00000541416 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
SNHG1-216ENST00000541416 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
SNHG1-216ENST00000541416 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
SNHG1-216ENST00000541416 HIST1H4AP62805 103 aaKnown RBP4.84□□□□□ -1.63
SNHG1-216ENST00000541416 COL5A1-AS1Q5SY13 56 aa4.84□□□□□ -1.63
SNHG1-216ENST00000541416 A0A1B0GV90 55 aa4.83□□□□□ -1.64
SNHG1-216ENST00000541416 ATP5EP2Q5VTU8 51 aa4.83□□□□□ -1.64
SNHG1-216ENST00000541416 LINC00208Q96KT6 92 aa4.83□□□□□ -1.64
SNHG1-216ENST00000541416 F8W1H4 67 aa4.82□□□□□ -1.64
SNHG1-216ENST00000541416 GTF2H5Q6ZYL4 71 aa4.82□□□□□ -1.64
SNHG1-216ENST00000541416 MP68P56378 58 aa4.81□□□□□ -1.64
SNHG1-216ENST00000541416 ETDBQ3ZM63 59 aa4.81□□□□□ -1.64
SNHG1-216ENST00000541416 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
SNHG1-216ENST00000541416 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
SNHG1-216ENST00000541416 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
SNHG1-216ENST00000541416 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
SNHG1-216ENST00000541416 FAM240AA0A1B0GVK7 77 aa4.71□□□□□ -1.66
SNHG1-216ENST00000541416 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
SNHG1-216ENST00000541416 H3BPC8 53 aa4.68□□□□□ -1.66
SNHG1-216ENST00000541416 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
SNHG1-216ENST00000541416 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
SNHG1-216ENST00000541416 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
SNHG1-216ENST00000541416 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
SNHG1-216ENST00000541416 SPTSSBQ8NFR3 76 aa4.65□□□□□ -1.67
SNHG1-216ENST00000541416 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SNHG1-216ENST00000541416 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
SNHG1-216ENST00000541416 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
SNHG1-216ENST00000541416 CAMK2N1Q7Z7J9 78 aa4.6□□□□□ -1.67
SNHG1-216ENST00000541416 ACYP2P14621 99 aa4.59□□□□□ -1.67
SNHG1-216ENST00000541416 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
SNHG1-216ENST00000541416 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
SNHG1-216ENST00000541416 MT1EP04732 61 aa4.57□□□□□ -1.68
SNHG1-216ENST00000541416 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
SNHG1-216ENST00000541416 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
SNHG1-216ENST00000541416 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
SNHG1-216ENST00000541416 SCGB1A1P11684 91 aa4.53□□□□□ -1.68
SNHG1-216ENST00000541416 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
SNHG1-216ENST00000541416 CHKB-CPT1BH3BT56 60 aa4.52□□□□□ -1.69
SNHG1-216ENST00000541416 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SNHG1-216ENST00000541416 MT4P47944 62 aa4.51□□□□□ -1.69
SNHG1-216ENST00000541416 MT1GP13640 62 aa4.5□□□□□ -1.69
SNHG1-216ENST00000541416 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
SNHG1-216ENST00000541416 A0A0D9SG42 100 aa4.42□□□□□ -1.7
SNHG1-216ENST00000541416 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
SNHG1-216ENST00000541416 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
SNHG1-216ENST00000541416 K7ERU9 68 aa4.39□□□□□ -1.71
SNHG1-216ENST00000541416 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
SNHG1-216ENST00000541416 MT1MQ8N339 61 aa4.38□□□□□ -1.71
SNHG1-216ENST00000541416 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
SNHG1-216ENST00000541416 J3QR89 54 aa4.33□□□□□ -1.72
SNHG1-216ENST00000541416 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
SNHG1-216ENST00000541416 MT1LQ93083 61 aa4.31□□□□□ -1.72
SNHG1-216ENST00000541416 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
SNHG1-216ENST00000541416 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
SNHG1-216ENST00000541416 SEC61GP60059 68 aa4.29□□□□□ -1.72
SNHG1-216ENST00000541416 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
SNHG1-216ENST00000541416 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SNHG1-216ENST00000541416 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
SNHG1-216ENST00000541416 SPANXA2-OT1Q8N9U9 137 aa4.25□□□□□ -1.73
SNHG1-216ENST00000541416 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
SNHG1-216ENST00000541416 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms