RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
AC005840.4-201ENST00000541242 RPS29P62273 56 aaKnown RBP7.84□□□□□ -1.16
AC005840.4-201ENST00000541242 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
AC005840.4-201ENST00000541242 A0A0D9SG42 100 aa7.79□□□□□ -1.16
AC005840.4-201ENST00000541242 TPRXLQ17RH7 258 aa7.77□□□□□ -1.17
AC005840.4-201ENST00000541242 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
AC005840.4-201ENST00000541242 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
AC005840.4-201ENST00000541242 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
AC005840.4-201ENST00000541242 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
AC005840.4-201ENST00000541242 HSPG2P98160 4391 aa7.74□□□□□ -1.17
AC005840.4-201ENST00000541242 RPL37P61927 97 aaKnown RBP7.73□□□□□ -1.17
AC005840.4-201ENST00000541242 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
AC005840.4-201ENST00000541242 RYR1P21817 5038 aa7.72□□□□□ -1.17
AC005840.4-201ENST00000541242 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
AC005840.4-201ENST00000541242 TNXBP22105 4242 aa7.69□□□□□ -1.18
AC005840.4-201ENST00000541242 NDUFAF8A1L188 74 aa7.68□□□□□ -1.18
AC005840.4-201ENST00000541242 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
AC005840.4-201ENST00000541242 Q5VSD8 79 aa7.66□□□□□ -1.18
AC005840.4-201ENST00000541242 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
AC005840.4-201ENST00000541242 KRTAP17-1Q9BYP8 105 aa7.65□□□□□ -1.18
AC005840.4-201ENST00000541242 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
AC005840.4-201ENST00000541242 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
AC005840.4-201ENST00000541242 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
AC005840.4-201ENST00000541242 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
AC005840.4-201ENST00000541242 S4R3F8 94 aa7.53□□□□□ -1.2
AC005840.4-201ENST00000541242 BIRC6Q9NR09 4857 aa7.52□□□□□ -1.21
AC005840.4-201ENST00000541242 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
AC005840.4-201ENST00000541242 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
AC005840.4-201ENST00000541242 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
AC005840.4-201ENST00000541242 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
AC005840.4-201ENST00000541242 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
AC005840.4-201ENST00000541242 HERC2O95714 4834 aa7.39□□□□□ -1.23
AC005840.4-201ENST00000541242 XP32Q5T750 250 aa7.39□□□□□ -1.23
AC005840.4-201ENST00000541242 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
AC005840.4-201ENST00000541242 LPAP08519 4548 aa7.29□□□□□ -1.24
AC005840.4-201ENST00000541242 LRP2P98164 4655 aa7.26□□□□□ -1.25
AC005840.4-201ENST00000541242 J3QL48 77 aa7.23□□□□□ -1.25
AC005840.4-201ENST00000541242 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
AC005840.4-201ENST00000541242 M0QZ58 72 aa7.15□□□□□ -1.27
AC005840.4-201ENST00000541242 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
AC005840.4-201ENST00000541242 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
AC005840.4-201ENST00000541242 HERC1Q15751 4861 aa7.03□□□□□ -1.28
AC005840.4-201ENST00000541242 R4GN34 69 aa6.99□□□□□ -1.29
AC005840.4-201ENST00000541242 LORP23490 312 aaPredicted RBP6.95□□□□□ -1.3
AC005840.4-201ENST00000541242 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
AC005840.4-201ENST00000541242 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.31
AC005840.4-201ENST00000541242 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
AC005840.4-201ENST00000541242 HMCN2Q8NDA2 5059 aa6.85□□□□□ -1.31
AC005840.4-201ENST00000541242 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
AC005840.4-201ENST00000541242 MUC2Q02817 5179 aa6.71□□□□□ -1.34
AC005840.4-201ENST00000541242 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
AC005840.4-201ENST00000541242 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
AC005840.4-201ENST00000541242 UBR4Q5T4S7 5183 aa6.62□□□□□ -1.35
AC005840.4-201ENST00000541242 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
AC005840.4-201ENST00000541242 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
AC005840.4-201ENST00000541242 TNP1P09430 55 aa6.44□□□□□ -1.38
AC005840.4-201ENST00000541242 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
AC005840.4-201ENST00000541242 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
AC005840.4-201ENST00000541242 LCE2CQ5TA81 110 aa6.41□□□□□ -1.38
AC005840.4-201ENST00000541242 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.4
AC005840.4-201ENST00000541242 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
AC005840.4-201ENST00000541242 MT1HP80294 61 aa6.22□□□□□ -1.41
AC005840.4-201ENST00000541242 M0R2T5 61 aa6.19□□□□□ -1.42
AC005840.4-201ENST00000541242 LCE3AQ5TA76 89 aa6.15□□□□□ -1.43
AC005840.4-201ENST00000541242 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
AC005840.4-201ENST00000541242 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
AC005840.4-201ENST00000541242 MT1FP04733 61 aa6.08□□□□□ -1.44
AC005840.4-201ENST00000541242 MT2AP02795 61 aa6.08□□□□□ -1.44
AC005840.4-201ENST00000541242 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
AC005840.4-201ENST00000541242 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
AC005840.4-201ENST00000541242 INE1O15225 51 aa6.03□□□□□ -1.44
AC005840.4-201ENST00000541242 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
AC005840.4-201ENST00000541242 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
AC005840.4-201ENST00000541242 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
AC005840.4-201ENST00000541242 MT1BP07438 61 aa5.84□□□□□ -1.47
AC005840.4-201ENST00000541242 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
AC005840.4-201ENST00000541242 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
AC005840.4-201ENST00000541242 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
AC005840.4-201ENST00000541242 MT1XP80297 61 aa5.75□□□□□ -1.49
AC005840.4-201ENST00000541242 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
AC005840.4-201ENST00000541242 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
AC005840.4-201ENST00000541242 LCE2BO14633 110 aa5.63□□□□□ -1.51
AC005840.4-201ENST00000541242 USH2AO75445 5202 aa5.56□□□□□ -1.52
AC005840.4-201ENST00000541242 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
AC005840.4-201ENST00000541242 KMT2DO14686 5537 aa5.47□□□□□ -1.53
AC005840.4-201ENST00000541242 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
AC005840.4-201ENST00000541242 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
AC005840.4-201ENST00000541242 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
AC005840.4-201ENST00000541242 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.55
AC005840.4-201ENST00000541242 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
AC005840.4-201ENST00000541242 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
AC005840.4-201ENST00000541242 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
AC005840.4-201ENST00000541242 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
AC005840.4-201ENST00000541242 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
AC005840.4-201ENST00000541242 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
AC005840.4-201ENST00000541242 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
AC005840.4-201ENST00000541242 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
AC005840.4-201ENST00000541242 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
AC005840.4-201ENST00000541242 FCGBPQ9Y6R7 5405 aaPredicted RBP5.15□□□□□ -1.59
AC005840.4-201ENST00000541242 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms