RNA–Protein interactions for RNA: ENST00000541213.5

POLE-216, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 1,675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-216ENST00000541213 SERP1Q9Y6X1 66 aa10.98□□□□□ -0.65
POLE-216ENST00000541213 LCA10Q71F78 164 aa10.95□□□□□ -0.66
POLE-216ENST00000541213 SPTSSBQ8NFR3 76 aa10.89□□□□□ -0.67
POLE-216ENST00000541213 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
POLE-216ENST00000541213 RPS28P62857 69 aaKnown RBP10.86□□□□□ -0.67
POLE-216ENST00000541213 CSAG1Q6PB30 78 aa10.83□□□□□ -0.68
POLE-216ENST00000541213 MT1HP80294 61 aa10.82□□□□□ -0.68
POLE-216ENST00000541213 FAT4Q6V0I7 4981 aa10.78□□□□□ -0.68
POLE-216ENST00000541213 FLGP20930 4061 aaPredicted RBP10.77□□□□□ -0.69
POLE-216ENST00000541213 M0R2T5 61 aa10.75□□□□□ -0.69
POLE-216ENST00000541213 SMIM26A0A096LP01 95 aa10.66□□□□□ -0.7
POLE-216ENST00000541213 LCE2AQ5TA79 106 aaPredicted RBP10.57□□□□□ -0.72
POLE-216ENST00000541213 H0YAA0 97 aa10.57□□□□□ -0.72
POLE-216ENST00000541213 V9GYY9 64 aa10.55□□□□□ -0.72
POLE-216ENST00000541213 SEC61GP60059 68 aa10.54□□□□□ -0.72
POLE-216ENST00000541213 LINC01558Q9Y6Z2 57 aa10.54□□□□□ -0.72
POLE-216ENST00000541213 Q1T7F1 81 aa10.52□□□□□ -0.73
POLE-216ENST00000541213 A0A1B0GU69 56 aa10.48□□□□□ -0.73
POLE-216ENST00000541213 ADM2Q7Z4H4 148 aa10.48□□□□□ -0.73
POLE-216ENST00000541213 KRTAP10-6P60371 365 aaPredicted RBP10.46□□□□□ -0.74
POLE-216ENST00000541213 PRR15LQ9BU68 103 aa10.44□□□□□ -0.74
POLE-216ENST00000541213 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
POLE-216ENST00000541213 LORP23490 312 aaPredicted RBP10.41□□□□□ -0.74
POLE-216ENST00000541213 KRTAP9-8Q9BYQ0 159 aa10.38□□□□□ -0.75
POLE-216ENST00000541213 P0C880 135 aa10.35□□□□□ -0.75
POLE-216ENST00000541213 PSPHP1O15172 72 aa10.32□□□□□ -0.76
POLE-216ENST00000541213 MT2AP02795 61 aa10.31□□□□□ -0.76
POLE-216ENST00000541213 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
POLE-216ENST00000541213 A0A1B0GU33 70 aa10.25□□□□□ -0.77
POLE-216ENST00000541213 MT1FP04733 61 aa10.24□□□□□ -0.77
POLE-216ENST00000541213 CRIPTQ9P021 101 aa10.22□□□□□ -0.77
POLE-216ENST00000541213 Q5VV11 94 aa10.22□□□□□ -0.77
POLE-216ENST00000541213 R4GN34 69 aa10.17□□□□□ -0.78
POLE-216ENST00000541213 M0QZ58 72 aa10.15□□□□□ -0.79
POLE-216ENST00000541213 UQCR11O14957 56 aa10.12□□□□□ -0.79
POLE-216ENST00000541213 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
POLE-216ENST00000541213 A6NED7 52 aa10.03□□□□□ -0.8
POLE-216ENST00000541213 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
POLE-216ENST00000541213 KRTAP9-3Q9BYQ3 159 aa10.02□□□□□ -0.81
POLE-216ENST00000541213 SPRR2GQ9BYE4 73 aa10.01□□□□□ -0.81
POLE-216ENST00000541213 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
POLE-216ENST00000541213 KRTAP19-1Q8IUB9 90 aa9.97□□□□□ -0.81
POLE-216ENST00000541213 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
POLE-216ENST00000541213 A0A0D9SG42 100 aa9.87□□□□□ -0.83
POLE-216ENST00000541213 A8MU10 97 aa9.84□□□□□ -0.83
POLE-216ENST00000541213 CDC42SE1Q9NRR8 79 aa9.81□□□□□ -0.84
POLE-216ENST00000541213 A6NN06 94 aa9.78□□□□□ -0.84
POLE-216ENST00000541213 KRTAP19-8Q3LI54 63 aa9.78□□□□□ -0.84
POLE-216ENST00000541213 LCE2BO14633 110 aa9.76□□□□□ -0.85
POLE-216ENST00000541213 LCE2DQ5TA82 110 aaPredicted RBP9.74□□□□□ -0.85
POLE-216ENST00000541213 BRK1Q8WUW1 75 aa9.71□□□□□ -0.85
POLE-216ENST00000541213 SPINT4Q6UDR6 99 aa9.68□□□□□ -0.86
POLE-216ENST00000541213 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
POLE-216ENST00000541213 PLAC4Q8WY50 150 aa9.67□□□□□ -0.86
POLE-216ENST00000541213 MT1BP07438 61 aa9.64□□□□□ -0.87
POLE-216ENST00000541213 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
POLE-216ENST00000541213 K7ERS5 55 aa9.62□□□□□ -0.87
POLE-216ENST00000541213 CAMK2N1Q7Z7J9 78 aa9.48□□□□□ -0.89
POLE-216ENST00000541213 USH2AO75445 5202 aa9.47□□□□□ -0.89
POLE-216ENST00000541213 KRTAP9-2Q9BYQ4 174 aa9.46□□□□□ -0.89
POLE-216ENST00000541213 PRO0628Q9UI54 55 aa9.37□□□□□ -0.91
POLE-216ENST00000541213 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
POLE-216ENST00000541213 FSIP2Q5CZC0 6907 aa9.3□□□□□ -0.92
POLE-216ENST00000541213 MT1XP80297 61 aa9.27□□□□□ -0.93
POLE-216ENST00000541213 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
POLE-216ENST00000541213 KRTAP10-5P60370 271 aa9.26□□□□□ -0.93
POLE-216ENST00000541213 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
POLE-216ENST00000541213 SSPOA2VEC9 5147 aa9.17□□□□□ -0.94
POLE-216ENST00000541213 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
POLE-216ENST00000541213 ROMO1P60602 79 aa9.13□□□□□ -0.95
POLE-216ENST00000541213 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
POLE-216ENST00000541213 TNP1P09430 55 aa8.99□□□□□ -0.97
POLE-216ENST00000541213 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
POLE-216ENST00000541213 KRTAP10-7P60409 375 aaPredicted RBP8.88□□□□□ -0.99
POLE-216ENST00000541213 FCGBPQ9Y6R7 5405 aaPredicted RBP8.87□□□□□ -0.99
POLE-216ENST00000541213 KRTAP9-6A0A140TA67 174 aa8.83□□□□□ -1
POLE-216ENST00000541213 KRTAP10-12P60413 245 aa8.81□□□□□ -1
POLE-216ENST00000541213 KTN1-AS1Q86SY8 53 aa8.71□□□□□ -1.02
POLE-216ENST00000541213 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.02
POLE-216ENST00000541213 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
POLE-216ENST00000541213 KRTAP4-8A0A0G2JLE6 195 aa8.59□□□□□ -1.03
POLE-216ENST00000541213 LCE3AQ5TA76 89 aa8.59□□□□□ -1.03
POLE-216ENST00000541213 KRTAP4-8Q9BYQ9 185 aa8.59□□□□□ -1.03
POLE-216ENST00000541213 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
POLE-216ENST00000541213 KMT2DO14686 5537 aa8.49□□□□□ -1.05
POLE-216ENST00000541213 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
POLE-216ENST00000541213 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
POLE-216ENST00000541213 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.42□□□□□ -1.06
POLE-216ENST00000541213 KRTAP19-5Q3LI72 72 aa8.32□□□□□ -1.08
POLE-216ENST00000541213 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
POLE-216ENST00000541213 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
POLE-216ENST00000541213 KRTAP19-7Q3SYF9 63 aa8.27□□□□□ -1.08
POLE-216ENST00000541213 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
POLE-216ENST00000541213 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
POLE-216ENST00000541213 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
POLE-216ENST00000541213 KRTAP6-3Q3LI67 103 aa8.18□□□□□ -1.1
POLE-216ENST00000541213 MT1EP04732 61 aa8.15□□□□□ -1.1
POLE-216ENST00000541213 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
POLE-216ENST00000541213 KRTAP9-7A8MTY7 169 aa8.05□□□□□ -1.12
POLE-216ENST00000541213 MT1LQ93083 61 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms