RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 H3BPC8 53 aa6.72□□□□□ -1.33
LTBR-209ENST00000541102 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
LTBR-209ENST00000541102 LCA10Q71F78 164 aa6.7□□□□□ -1.34
LTBR-209ENST00000541102 SMIM20Q8N5G0 67 aa6.7□□□□□ -1.34
LTBR-209ENST00000541102 S4R3F8 94 aa6.69□□□□□ -1.34
LTBR-209ENST00000541102 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
LTBR-209ENST00000541102 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
LTBR-209ENST00000541102 SNURFQ9Y675 71 aa6.64□□□□□ -1.35
LTBR-209ENST00000541102 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
LTBR-209ENST00000541102 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
LTBR-209ENST00000541102 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
LTBR-209ENST00000541102 A8MUN3 132 aa6.58□□□□□ -1.36
LTBR-209ENST00000541102 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
LTBR-209ENST00000541102 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
LTBR-209ENST00000541102 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
LTBR-209ENST00000541102 COX7CP15954 63 aa6.52□□□□□ -1.37
LTBR-209ENST00000541102 NDUFC1O43677 76 aa6.5□□□□□ -1.37
LTBR-209ENST00000541102 CYSTM1Q9H1C7 97 aa6.5□□□□□ -1.37
LTBR-209ENST00000541102 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
LTBR-209ENST00000541102 ACYP2P14621 99 aa6.42□□□□□ -1.38
LTBR-209ENST00000541102 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
LTBR-209ENST00000541102 MACF1Q9UPN3 7388 aaKnown RBP6.41□□□□□ -1.38
LTBR-209ENST00000541102 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
LTBR-209ENST00000541102 H7BZZ5 65 aa6.38□□□□□ -1.39
LTBR-209ENST00000541102 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
LTBR-209ENST00000541102 H0YAA0 97 aa6.36□□□□□ -1.39
LTBR-209ENST00000541102 Q5VV11 94 aa6.36□□□□□ -1.39
LTBR-209ENST00000541102 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
LTBR-209ENST00000541102 MT1BP07438 61 aa6.35□□□□□ -1.39
LTBR-209ENST00000541102 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
LTBR-209ENST00000541102 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
LTBR-209ENST00000541102 P0C880 135 aa6.31□□□□□ -1.4
LTBR-209ENST00000541102 A6NN06 94 aa6.3□□□□□ -1.4
LTBR-209ENST00000541102 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
LTBR-209ENST00000541102 COA5Q86WW8 74 aa6.28□□□□□ -1.4
LTBR-209ENST00000541102 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
LTBR-209ENST00000541102 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
LTBR-209ENST00000541102 SPTSSBQ8NFR3 76 aa6.23□□□□□ -1.41
LTBR-209ENST00000541102 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
LTBR-209ENST00000541102 M0QZ58 72 aa6.12□□□□□ -1.43
LTBR-209ENST00000541102 R4GN34 69 aa6.12□□□□□ -1.43
LTBR-209ENST00000541102 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
LTBR-209ENST00000541102 TMEM258P61165 79 aa6.06□□□□□ -1.44
LTBR-209ENST00000541102 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
LTBR-209ENST00000541102 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
LTBR-209ENST00000541102 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
LTBR-209ENST00000541102 NEBP20929 6669 aa6□□□□□ -1.45
LTBR-209ENST00000541102 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
LTBR-209ENST00000541102 MT1XP80297 61 aa5.95□□□□□ -1.46
LTBR-209ENST00000541102 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
LTBR-209ENST00000541102 SEC61GP60059 68 aa5.94□□□□□ -1.46
LTBR-209ENST00000541102 KRTAP5-9P26371 169 aa5.93□□□□□ -1.46
LTBR-209ENST00000541102 PCP4P48539 62 aa5.93□□□□□ -1.46
LTBR-209ENST00000541102 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
LTBR-209ENST00000541102 A0A1B0GU69 56 aa5.9□□□□□ -1.46
LTBR-209ENST00000541102 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
LTBR-209ENST00000541102 A0A1B0GU33 70 aa5.89□□□□□ -1.47
LTBR-209ENST00000541102 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
LTBR-209ENST00000541102 KMT2DO14686 5537 aa5.84□□□□□ -1.47
LTBR-209ENST00000541102 A0A0D9SG42 100 aa5.84□□□□□ -1.47
LTBR-209ENST00000541102 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
LTBR-209ENST00000541102 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
LTBR-209ENST00000541102 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
LTBR-209ENST00000541102 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
LTBR-209ENST00000541102 A8MU10 97 aa5.77□□□□□ -1.49
LTBR-209ENST00000541102 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
LTBR-209ENST00000541102 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
LTBR-209ENST00000541102 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
LTBR-209ENST00000541102 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
LTBR-209ENST00000541102 SPRR2EP22531 72 aa5.73□□□□□ -1.49
LTBR-209ENST00000541102 SPRR2BP35325 72 aa5.73□□□□□ -1.49
LTBR-209ENST00000541102 SPRR2AP35326 72 aa5.73□□□□□ -1.49
LTBR-209ENST00000541102 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
LTBR-209ENST00000541102 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
LTBR-209ENST00000541102 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
LTBR-209ENST00000541102 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
LTBR-209ENST00000541102 Q1T7F1 81 aa5.67□□□□□ -1.5
LTBR-209ENST00000541102 PSPHP1O15172 72 aa5.66□□□□□ -1.5
LTBR-209ENST00000541102 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
LTBR-209ENST00000541102 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
LTBR-209ENST00000541102 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
LTBR-209ENST00000541102 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
LTBR-209ENST00000541102 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
LTBR-209ENST00000541102 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
LTBR-209ENST00000541102 UQCR11O14957 56 aa5.61□□□□□ -1.51
LTBR-209ENST00000541102 V9GYY9 64 aa5.61□□□□□ -1.51
LTBR-209ENST00000541102 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
LTBR-209ENST00000541102 SPRR2DP22532 72 aa5.53□□□□□ -1.52
LTBR-209ENST00000541102 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
LTBR-209ENST00000541102 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
LTBR-209ENST00000541102 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
LTBR-209ENST00000541102 A6NED7 52 aa5.43□□□□□ -1.54
LTBR-209ENST00000541102 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
LTBR-209ENST00000541102 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
LTBR-209ENST00000541102 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
LTBR-209ENST00000541102 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
LTBR-209ENST00000541102 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
LTBR-209ENST00000541102 TNP1P09430 55 aa5.3□□□□□ -1.56
LTBR-209ENST00000541102 K7ERS5 55 aa5.28□□□□□ -1.56
LTBR-209ENST00000541102 MT1EP04732 61 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms