RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 P0C880 135 aa6.1□□□□□ -1.43
LGR5-203ENST00000540815 Q5VSD8 79 aa6.1□□□□□ -1.43
LGR5-203ENST00000540815 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
LGR5-203ENST00000540815 RYR1P21817 5038 aa6.07□□□□□ -1.44
LGR5-203ENST00000540815 FAT3Q8TDW7 4589 aa6.07□□□□□ -1.44
LGR5-203ENST00000540815 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
LGR5-203ENST00000540815 A0A1B0GU33 70 aa6□□□□□ -1.45
LGR5-203ENST00000540815 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
LGR5-203ENST00000540815 MYCBP2O75592 4640 aa5.94□□□□□ -1.46
LGR5-203ENST00000540815 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
LGR5-203ENST00000540815 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
LGR5-203ENST00000540815 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
LGR5-203ENST00000540815 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
LGR5-203ENST00000540815 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
LGR5-203ENST00000540815 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
LGR5-203ENST00000540815 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
LGR5-203ENST00000540815 A0A0D9SG42 100 aa5.91□□□□□ -1.46
LGR5-203ENST00000540815 XP32Q5T750 250 aa5.91□□□□□ -1.46
LGR5-203ENST00000540815 NDUFAF8A1L188 74 aa5.89□□□□□ -1.47
LGR5-203ENST00000540815 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
LGR5-203ENST00000540815 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
LGR5-203ENST00000540815 K7ERS5 55 aa5.8□□□□□ -1.48
LGR5-203ENST00000540815 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
LGR5-203ENST00000540815 BIRC6Q9NR09 4857 aa5.78□□□□□ -1.48
LGR5-203ENST00000540815 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
LGR5-203ENST00000540815 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
LGR5-203ENST00000540815 LRP2P98164 4655 aa5.72□□□□□ -1.49
LGR5-203ENST00000540815 S4R3F8 94 aa5.72□□□□□ -1.49
LGR5-203ENST00000540815 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
LGR5-203ENST00000540815 LPAP08519 4548 aa5.7□□□□□ -1.5
LGR5-203ENST00000540815 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
LGR5-203ENST00000540815 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
LGR5-203ENST00000540815 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
LGR5-203ENST00000540815 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
LGR5-203ENST00000540815 HERC2O95714 4834 aa5.61□□□□□ -1.51
LGR5-203ENST00000540815 J3QL48 77 aa5.56□□□□□ -1.52
LGR5-203ENST00000540815 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
LGR5-203ENST00000540815 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
LGR5-203ENST00000540815 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
LGR5-203ENST00000540815 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
LGR5-203ENST00000540815 M0QZ58 72 aa5.4□□□□□ -1.54
LGR5-203ENST00000540815 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.55
LGR5-203ENST00000540815 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
LGR5-203ENST00000540815 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
LGR5-203ENST00000540815 HERC1Q15751 4861 aa5.31□□□□□ -1.56
LGR5-203ENST00000540815 PLAC4Q8WY50 150 aa5.29□□□□□ -1.56
LGR5-203ENST00000540815 MUC2Q02817 5179 aa5.28□□□□□ -1.56
LGR5-203ENST00000540815 R4GN34 69 aa5.28□□□□□ -1.56
LGR5-203ENST00000540815 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
LGR5-203ENST00000540815 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
LGR5-203ENST00000540815 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
LGR5-203ENST00000540815 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
LGR5-203ENST00000540815 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
LGR5-203ENST00000540815 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
LGR5-203ENST00000540815 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
LGR5-203ENST00000540815 CAMK2N1Q7Z7J9 78 aa4.98□□□□□ -1.61
LGR5-203ENST00000540815 MT1HP80294 61 aa4.97□□□□□ -1.61
LGR5-203ENST00000540815 M0R2T5 61 aa4.93□□□□□ -1.62
LGR5-203ENST00000540815 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
LGR5-203ENST00000540815 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
LGR5-203ENST00000540815 MT2AP02795 61 aa4.86□□□□□ -1.63
LGR5-203ENST00000540815 MT1FP04733 61 aa4.86□□□□□ -1.63
LGR5-203ENST00000540815 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
LGR5-203ENST00000540815 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
LGR5-203ENST00000540815 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
LGR5-203ENST00000540815 TNP1P09430 55 aa4.8□□□□□ -1.64
LGR5-203ENST00000540815 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
LGR5-203ENST00000540815 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
LGR5-203ENST00000540815 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
LGR5-203ENST00000540815 MT1BP07438 61 aa4.66□□□□□ -1.66
LGR5-203ENST00000540815 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
LGR5-203ENST00000540815 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
LGR5-203ENST00000540815 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
LGR5-203ENST00000540815 MT1XP80297 61 aa4.58□□□□□ -1.68
LGR5-203ENST00000540815 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
LGR5-203ENST00000540815 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
LGR5-203ENST00000540815 LCE2BO14633 110 aa4.5□□□□□ -1.69
LGR5-203ENST00000540815 LCE2DQ5TA82 110 aaPredicted RBP4.46□□□□□ -1.69
LGR5-203ENST00000540815 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.69
LGR5-203ENST00000540815 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
LGR5-203ENST00000540815 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
LGR5-203ENST00000540815 USH2AO75445 5202 aa4.36□□□□□ -1.71
LGR5-203ENST00000540815 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
LGR5-203ENST00000540815 KMT2DO14686 5537 aa4.36□□□□□ -1.71
LGR5-203ENST00000540815 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
LGR5-203ENST00000540815 INE1O15225 51 aa4.35□□□□□ -1.71
LGR5-203ENST00000540815 KRTAP9-6A0A140TA67 174 aa4.22□□□□□ -1.73
LGR5-203ENST00000540815 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
LGR5-203ENST00000540815 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
LGR5-203ENST00000540815 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
LGR5-203ENST00000540815 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
LGR5-203ENST00000540815 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
LGR5-203ENST00000540815 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
LGR5-203ENST00000540815 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
LGR5-203ENST00000540815 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
LGR5-203ENST00000540815 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
LGR5-203ENST00000540815 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
LGR5-203ENST00000540815 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
LGR5-203ENST00000540815 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
LGR5-203ENST00000540815 MT1EP04732 61 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms