RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
DDX55-207ENST00000540763 KRTAP9-7A8MTY7 169 aa9.18□□□□□ -0.94
DDX55-207ENST00000540763 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.18□□□□□ -0.94
DDX55-207ENST00000540763 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
DDX55-207ENST00000540763 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
DDX55-207ENST00000540763 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
DDX55-207ENST00000540763 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
DDX55-207ENST00000540763 NDUFC1O43677 76 aa9.07□□□□□ -0.96
DDX55-207ENST00000540763 SNURFQ9Y675 71 aa9.02□□□□□ -0.97
DDX55-207ENST00000540763 USH2AO75445 5202 aa9.02□□□□□ -0.97
DDX55-207ENST00000540763 C20orf197Q8N268 126 aa9.01□□□□□ -0.97
DDX55-207ENST00000540763 SSPOA2VEC9 5147 aa8.99□□□□□ -0.97
DDX55-207ENST00000540763 LCE2BO14633 110 aa8.96□□□□□ -0.98
DDX55-207ENST00000540763 COX7CP15954 63 aa8.96□□□□□ -0.98
DDX55-207ENST00000540763 H0YAA0 97 aa8.95□□□□□ -0.98
DDX55-207ENST00000540763 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
DDX55-207ENST00000540763 ACYP2P14621 99 aa8.94□□□□□ -0.98
DDX55-207ENST00000540763 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
DDX55-207ENST00000540763 FCGBPQ9Y6R7 5405 aaPredicted RBP8.9□□□□□ -0.98
DDX55-207ENST00000540763 CRIPTQ9P021 101 aa8.83□□□□□ -1
DDX55-207ENST00000540763 ANAPC13Q9BS18 74 aa8.82□□□□□ -1
DDX55-207ENST00000540763 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
DDX55-207ENST00000540763 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
DDX55-207ENST00000540763 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
DDX55-207ENST00000540763 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
DDX55-207ENST00000540763 H7BZZ5 65 aa8.74□□□□□ -1.01
DDX55-207ENST00000540763 MACF1Q9UPN3 7388 aaKnown RBP8.74□□□□□ -1.01
DDX55-207ENST00000540763 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
DDX55-207ENST00000540763 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
DDX55-207ENST00000540763 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
DDX55-207ENST00000540763 KRTAP19-6Q3LI70 58 aa8.66□□□□□ -1.02
DDX55-207ENST00000540763 Q5VV11 94 aa8.63□□□□□ -1.03
DDX55-207ENST00000540763 COA5Q86WW8 74 aa8.62□□□□□ -1.03
DDX55-207ENST00000540763 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
DDX55-207ENST00000540763 P0C880 135 aa8.61□□□□□ -1.03
DDX55-207ENST00000540763 CCDC179H3BU77 68 aa8.59□□□□□ -1.03
DDX55-207ENST00000540763 MT1BP07438 61 aa8.59□□□□□ -1.03
DDX55-207ENST00000540763 R4GN34 69 aa8.55□□□□□ -1.04
DDX55-207ENST00000540763 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
DDX55-207ENST00000540763 M0QZ58 72 aa8.48□□□□□ -1.05
DDX55-207ENST00000540763 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
DDX55-207ENST00000540763 TMEM258P61165 79 aa8.38□□□□□ -1.07
DDX55-207ENST00000540763 A6NN06 94 aa8.35□□□□□ -1.07
DDX55-207ENST00000540763 SEC61GP60059 68 aa8.35□□□□□ -1.07
DDX55-207ENST00000540763 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
DDX55-207ENST00000540763 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
DDX55-207ENST00000540763 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
DDX55-207ENST00000540763 LINC01554Q52M75 96 aa8.28□□□□□ -1.08
DDX55-207ENST00000540763 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
DDX55-207ENST00000540763 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
DDX55-207ENST00000540763 NEBP20929 6669 aa8.19□□□□□ -1.1
DDX55-207ENST00000540763 A0A1B0GU69 56 aa8.18□□□□□ -1.1
DDX55-207ENST00000540763 A0A1B0GU33 70 aa8.15□□□□□ -1.1
DDX55-207ENST00000540763 MT1XP80297 61 aa8.15□□□□□ -1.1
DDX55-207ENST00000540763 LINC01558Q9Y6Z2 57 aa8.08□□□□□ -1.12
DDX55-207ENST00000540763 PRR15LQ9BU68 103 aa8.07□□□□□ -1.12
DDX55-207ENST00000540763 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
DDX55-207ENST00000540763 KRTAP20-1Q3LI63 56 aa8.02□□□□□ -1.13
DDX55-207ENST00000540763 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
DDX55-207ENST00000540763 PCP4P48539 62 aa7.98□□□□□ -1.13
DDX55-207ENST00000540763 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
DDX55-207ENST00000540763 A0A0D9SG42 100 aa7.95□□□□□ -1.14
DDX55-207ENST00000540763 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
DDX55-207ENST00000540763 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
DDX55-207ENST00000540763 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
DDX55-207ENST00000540763 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
DDX55-207ENST00000540763 V9GYY9 64 aa7.87□□□□□ -1.15
DDX55-207ENST00000540763 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
DDX55-207ENST00000540763 UQCR11O14957 56 aa7.81□□□□□ -1.16
DDX55-207ENST00000540763 Q1T7F1 81 aa7.81□□□□□ -1.16
DDX55-207ENST00000540763 KMT2DO14686 5537 aa7.81□□□□□ -1.16
DDX55-207ENST00000540763 A8MU10 97 aa7.8□□□□□ -1.16
DDX55-207ENST00000540763 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
DDX55-207ENST00000540763 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
DDX55-207ENST00000540763 MDN1Q9NU22 5596 aa7.75□□□□□ -1.17
DDX55-207ENST00000540763 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
DDX55-207ENST00000540763 KRTAP2-3P0C7H8 128 aa7.71□□□□□ -1.18
DDX55-207ENST00000540763 KRTAP2-4Q9BYR9 128 aa7.71□□□□□ -1.18
DDX55-207ENST00000540763 PSPHP1O15172 72 aa7.67□□□□□ -1.18
DDX55-207ENST00000540763 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
DDX55-207ENST00000540763 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
DDX55-207ENST00000540763 SPRR2FQ96RM1 72 aa7.63□□□□□ -1.19
DDX55-207ENST00000540763 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
DDX55-207ENST00000540763 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
DDX55-207ENST00000540763 SPRR2EP22531 72 aa7.6□□□□□ -1.19
DDX55-207ENST00000540763 SPRR2BP35325 72 aa7.6□□□□□ -1.19
DDX55-207ENST00000540763 SPRR2AP35326 72 aa7.6□□□□□ -1.19
DDX55-207ENST00000540763 A6NED7 52 aa7.46□□□□□ -1.22
DDX55-207ENST00000540763 K7ERS5 55 aa7.46□□□□□ -1.22
DDX55-207ENST00000540763 C10orf95Q9H7T3 257 aa7.46□□□□□ -1.22
DDX55-207ENST00000540763 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
DDX55-207ENST00000540763 KRTAP2-2Q9BYT5 123 aa7.44□□□□□ -1.22
DDX55-207ENST00000540763 KRTAP2-1Q9BYU5 128 aa7.44□□□□□ -1.22
DDX55-207ENST00000540763 TNP1P09430 55 aa7.42□□□□□ -1.22
DDX55-207ENST00000540763 SPRR2DP22532 72 aa7.36□□□□□ -1.23
DDX55-207ENST00000540763 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
DDX55-207ENST00000540763 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
DDX55-207ENST00000540763 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
DDX55-207ENST00000540763 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
DDX55-207ENST00000540763 MT1EP04732 61 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms