RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 S4R3F8 94 aa8□□□□□ -1.13
CACNA2D4-211ENST00000540728 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
CACNA2D4-211ENST00000540728 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
CACNA2D4-211ENST00000540728 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
CACNA2D4-211ENST00000540728 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
CACNA2D4-211ENST00000540728 SMIM20Q8N5G0 67 aa7.96□□□□□ -1.14
CACNA2D4-211ENST00000540728 SYNE2Q8WXH0 6885 aaKnown RBP7.94□□□□□ -1.14
CACNA2D4-211ENST00000540728 H3BPC8 53 aa7.93□□□□□ -1.14
CACNA2D4-211ENST00000540728 TRAV7A0A075B6U4 112 aa7.91□□□□□ -1.14
CACNA2D4-211ENST00000540728 LCA10Q71F78 164 aa7.91□□□□□ -1.14
CACNA2D4-211ENST00000540728 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
CACNA2D4-211ENST00000540728 A8MUN3 132 aa7.78□□□□□ -1.16
CACNA2D4-211ENST00000540728 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
CACNA2D4-211ENST00000540728 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
CACNA2D4-211ENST00000540728 SNURFQ9Y675 71 aa7.74□□□□□ -1.17
CACNA2D4-211ENST00000540728 Q5VV11 94 aa7.73□□□□□ -1.17
CACNA2D4-211ENST00000540728 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
CACNA2D4-211ENST00000540728 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
CACNA2D4-211ENST00000540728 NDUFC1O43677 76 aa7.7□□□□□ -1.18
CACNA2D4-211ENST00000540728 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
CACNA2D4-211ENST00000540728 MT1BP07438 61 aa7.66□□□□□ -1.18
CACNA2D4-211ENST00000540728 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
CACNA2D4-211ENST00000540728 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
CACNA2D4-211ENST00000540728 A6NN06 94 aa7.65□□□□□ -1.18
CACNA2D4-211ENST00000540728 COX7CP15954 63 aa7.64□□□□□ -1.19
CACNA2D4-211ENST00000540728 KRTAP6-3Q3LI67 103 aa7.64□□□□□ -1.19
CACNA2D4-211ENST00000540728 ANAPC13Q9BS18 74 aa7.61□□□□□ -1.19
CACNA2D4-211ENST00000540728 H0YAA0 97 aa7.6□□□□□ -1.19
CACNA2D4-211ENST00000540728 ACYP2P14621 99 aa7.59□□□□□ -1.19
CACNA2D4-211ENST00000540728 SPANXA2-OT1Q8N9U9 137 aa7.54□□□□□ -1.2
CACNA2D4-211ENST00000540728 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
CACNA2D4-211ENST00000540728 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
CACNA2D4-211ENST00000540728 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
CACNA2D4-211ENST00000540728 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
CACNA2D4-211ENST00000540728 NEBP20929 6669 aa7.47□□□□□ -1.21
CACNA2D4-211ENST00000540728 H7BZZ5 65 aa7.41□□□□□ -1.22
CACNA2D4-211ENST00000540728 CYSTM1Q9H1C7 97 aa7.4□□□□□ -1.22
CACNA2D4-211ENST00000540728 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
CACNA2D4-211ENST00000540728 R4GN34 69 aa7.35□□□□□ -1.23
CACNA2D4-211ENST00000540728 COA5Q86WW8 74 aa7.34□□□□□ -1.23
CACNA2D4-211ENST00000540728 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.24
CACNA2D4-211ENST00000540728 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
CACNA2D4-211ENST00000540728 P0C880 135 aa7.31□□□□□ -1.24
CACNA2D4-211ENST00000540728 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
CACNA2D4-211ENST00000540728 M0QZ58 72 aa7.28□□□□□ -1.24
CACNA2D4-211ENST00000540728 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
CACNA2D4-211ENST00000540728 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
CACNA2D4-211ENST00000540728 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
CACNA2D4-211ENST00000540728 KMT2DO14686 5537 aa7.21□□□□□ -1.25
CACNA2D4-211ENST00000540728 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
CACNA2D4-211ENST00000540728 MT1XP80297 61 aa7.18□□□□□ -1.26
CACNA2D4-211ENST00000540728 KRTAP20-1Q3LI63 56 aa7.18□□□□□ -1.26
CACNA2D4-211ENST00000540728 SEC61GP60059 68 aa7.16□□□□□ -1.26
CACNA2D4-211ENST00000540728 TMEM258P61165 79 aa7.16□□□□□ -1.26
CACNA2D4-211ENST00000540728 MDN1Q9NU22 5596 aa7.14□□□□□ -1.27
CACNA2D4-211ENST00000540728 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
CACNA2D4-211ENST00000540728 SPRR2FQ96RM1 72 aa7.09□□□□□ -1.27
CACNA2D4-211ENST00000540728 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CACNA2D4-211ENST00000540728 KRTAP8-1Q8IUC2 63 aa7.03□□□□□ -1.28
CACNA2D4-211ENST00000540728 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CACNA2D4-211ENST00000540728 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CACNA2D4-211ENST00000540728 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CACNA2D4-211ENST00000540728 A0A1B0GU69 56 aa7□□□□□ -1.29
CACNA2D4-211ENST00000540728 PCP4P48539 62 aa6.95□□□□□ -1.3
CACNA2D4-211ENST00000540728 A0A1B0GU33 70 aa6.93□□□□□ -1.3
CACNA2D4-211ENST00000540728 PRR15LQ9BU68 103 aa6.93□□□□□ -1.3
CACNA2D4-211ENST00000540728 KRTAP2-3P0C7H8 128 aa6.92□□□□□ -1.3
CACNA2D4-211ENST00000540728 KRTAP2-4Q9BYR9 128 aa6.92□□□□□ -1.3
CACNA2D4-211ENST00000540728 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
CACNA2D4-211ENST00000540728 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
CACNA2D4-211ENST00000540728 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
CACNA2D4-211ENST00000540728 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
CACNA2D4-211ENST00000540728 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
CACNA2D4-211ENST00000540728 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
CACNA2D4-211ENST00000540728 A0A0D9SG42 100 aa6.84□□□□□ -1.31
CACNA2D4-211ENST00000540728 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
CACNA2D4-211ENST00000540728 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CACNA2D4-211ENST00000540728 SPRR2DP22532 72 aa6.78□□□□□ -1.32
CACNA2D4-211ENST00000540728 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
CACNA2D4-211ENST00000540728 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
CACNA2D4-211ENST00000540728 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
CACNA2D4-211ENST00000540728 V9GYY9 64 aa6.73□□□□□ -1.33
CACNA2D4-211ENST00000540728 KRTAP2-2Q9BYT5 123 aa6.69□□□□□ -1.34
CACNA2D4-211ENST00000540728 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
CACNA2D4-211ENST00000540728 A8MU10 97 aa6.66□□□□□ -1.34
CACNA2D4-211ENST00000540728 UQCR11O14957 56 aa6.66□□□□□ -1.34
CACNA2D4-211ENST00000540728 Q1T7F1 81 aa6.64□□□□□ -1.35
CACNA2D4-211ENST00000540728 PSPHP1O15172 72 aa6.63□□□□□ -1.35
CACNA2D4-211ENST00000540728 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
CACNA2D4-211ENST00000540728 RPS28P62857 69 aaKnown RBP6.61□□□□□ -1.35
CACNA2D4-211ENST00000540728 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
CACNA2D4-211ENST00000540728 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
CACNA2D4-211ENST00000540728 A6NED7 52 aa6.46□□□□□ -1.38
CACNA2D4-211ENST00000540728 K7ERS5 55 aa6.43□□□□□ -1.38
CACNA2D4-211ENST00000540728 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
CACNA2D4-211ENST00000540728 MT1EP04732 61 aa6.38□□□□□ -1.39
CACNA2D4-211ENST00000540728 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
CACNA2D4-211ENST00000540728 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
CACNA2D4-211ENST00000540728 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
CACNA2D4-211ENST00000540728 TNP1P09430 55 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms