RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
C11orf54-214ENST00000540113 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
C11orf54-214ENST00000540113 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
C11orf54-214ENST00000540113 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
C11orf54-214ENST00000540113 UQCR11O14957 56 aa6.13□□□□□ -1.43
C11orf54-214ENST00000540113 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
C11orf54-214ENST00000540113 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
C11orf54-214ENST00000540113 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
C11orf54-214ENST00000540113 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
C11orf54-214ENST00000540113 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
C11orf54-214ENST00000540113 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
C11orf54-214ENST00000540113 MYCBP2O75592 4640 aa6.05□□□□□ -1.44
C11orf54-214ENST00000540113 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
C11orf54-214ENST00000540113 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
C11orf54-214ENST00000540113 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
C11orf54-214ENST00000540113 H0YAA0 97 aa5.99□□□□□ -1.45
C11orf54-214ENST00000540113 XP32Q5T750 250 aa5.98□□□□□ -1.45
C11orf54-214ENST00000540113 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
C11orf54-214ENST00000540113 A0A1B0GU33 70 aa5.95□□□□□ -1.46
C11orf54-214ENST00000540113 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
C11orf54-214ENST00000540113 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
C11orf54-214ENST00000540113 LPAP08519 4548 aa5.9□□□□□ -1.46
C11orf54-214ENST00000540113 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
C11orf54-214ENST00000540113 HERC2O95714 4834 aa5.84□□□□□ -1.47
C11orf54-214ENST00000540113 LRP2P98164 4655 aa5.84□□□□□ -1.47
C11orf54-214ENST00000540113 CSAG1Q6PB30 78 aa5.84□□□□□ -1.48
C11orf54-214ENST00000540113 S4R3F8 94 aa5.83□□□□□ -1.48
C11orf54-214ENST00000540113 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
C11orf54-214ENST00000540113 ABCA13Q86UQ4 5058 aa5.82□□□□□ -1.48
C11orf54-214ENST00000540113 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
C11orf54-214ENST00000540113 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
C11orf54-214ENST00000540113 A0A0D9SG42 100 aa5.78□□□□□ -1.48
C11orf54-214ENST00000540113 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
C11orf54-214ENST00000540113 P0C880 135 aa5.76□□□□□ -1.49
C11orf54-214ENST00000540113 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
C11orf54-214ENST00000540113 K7ERS5 55 aa5.68□□□□□ -1.5
C11orf54-214ENST00000540113 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
C11orf54-214ENST00000540113 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
C11orf54-214ENST00000540113 ROMO1P60602 79 aa5.58□□□□□ -1.52
C11orf54-214ENST00000540113 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
C11orf54-214ENST00000540113 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
C11orf54-214ENST00000540113 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
C11orf54-214ENST00000540113 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
C11orf54-214ENST00000540113 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
C11orf54-214ENST00000540113 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
C11orf54-214ENST00000540113 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
C11orf54-214ENST00000540113 M0QZ58 72 aa5.46□□□□□ -1.54
C11orf54-214ENST00000540113 MUC2Q02817 5179 aa5.46□□□□□ -1.54
C11orf54-214ENST00000540113 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
C11orf54-214ENST00000540113 HERC1Q15751 4861 aa5.42□□□□□ -1.54
C11orf54-214ENST00000540113 R4GN34 69 aa5.41□□□□□ -1.54
C11orf54-214ENST00000540113 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
C11orf54-214ENST00000540113 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
C11orf54-214ENST00000540113 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
C11orf54-214ENST00000540113 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
C11orf54-214ENST00000540113 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
C11orf54-214ENST00000540113 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
C11orf54-214ENST00000540113 MT1HP80294 61 aa5.04□□□□□ -1.6
C11orf54-214ENST00000540113 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
C11orf54-214ENST00000540113 M0R2T5 61 aa5.02□□□□□ -1.61
C11orf54-214ENST00000540113 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
C11orf54-214ENST00000540113 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
C11orf54-214ENST00000540113 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
C11orf54-214ENST00000540113 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
C11orf54-214ENST00000540113 MT2AP02795 61 aa4.93□□□□□ -1.62
C11orf54-214ENST00000540113 MT1FP04733 61 aa4.93□□□□□ -1.62
C11orf54-214ENST00000540113 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
C11orf54-214ENST00000540113 TNP1P09430 55 aa4.89□□□□□ -1.63
C11orf54-214ENST00000540113 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
C11orf54-214ENST00000540113 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
C11orf54-214ENST00000540113 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
C11orf54-214ENST00000540113 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
C11orf54-214ENST00000540113 MT1BP07438 61 aa4.74□□□□□ -1.65
C11orf54-214ENST00000540113 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
C11orf54-214ENST00000540113 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
C11orf54-214ENST00000540113 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
C11orf54-214ENST00000540113 MT1XP80297 61 aa4.66□□□□□ -1.66
C11orf54-214ENST00000540113 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
C11orf54-214ENST00000540113 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
C11orf54-214ENST00000540113 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
C11orf54-214ENST00000540113 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
C11orf54-214ENST00000540113 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
C11orf54-214ENST00000540113 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
C11orf54-214ENST00000540113 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
C11orf54-214ENST00000540113 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
C11orf54-214ENST00000540113 USH2AO75445 5202 aa4.53□□□□□ -1.68
C11orf54-214ENST00000540113 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
C11orf54-214ENST00000540113 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
C11orf54-214ENST00000540113 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
C11orf54-214ENST00000540113 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
C11orf54-214ENST00000540113 KMT2DO14686 5537 aa4.42□□□□□ -1.7
C11orf54-214ENST00000540113 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.72
C11orf54-214ENST00000540113 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
C11orf54-214ENST00000540113 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
C11orf54-214ENST00000540113 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
C11orf54-214ENST00000540113 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
C11orf54-214ENST00000540113 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
C11orf54-214ENST00000540113 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
C11orf54-214ENST00000540113 INE1O15225 51 aa4.21□□□□□ -1.74
C11orf54-214ENST00000540113 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms