RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KRTAP13-1Q8IUC0 172 aa7.29□□□□□ -1.24
DDX55-206ENST00000539934 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
DDX55-206ENST00000539934 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
DDX55-206ENST00000539934 Q96NJ1 140 aa7.28□□□□□ -1.24
DDX55-206ENST00000539934 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
DDX55-206ENST00000539934 SPRR1BP22528 89 aa7.27□□□□□ -1.25
DDX55-206ENST00000539934 LRP2P98164 4655 aa7.26□□□□□ -1.25
DDX55-206ENST00000539934 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
DDX55-206ENST00000539934 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
DDX55-206ENST00000539934 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
DDX55-206ENST00000539934 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
DDX55-206ENST00000539934 Q6ZSA8 131 aa7.19□□□□□ -1.26
DDX55-206ENST00000539934 SSBP3-AS1Q7Z2R9 100 aa7.17□□□□□ -1.26
DDX55-206ENST00000539934 ANAPC11Q9NYG5 84 aa7.13□□□□□ -1.27
DDX55-206ENST00000539934 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
DDX55-206ENST00000539934 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.27
DDX55-206ENST00000539934 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
DDX55-206ENST00000539934 H0YAA0 97 aa7.04□□□□□ -1.28
DDX55-206ENST00000539934 TNXBP22105 4242 aa7.03□□□□□ -1.28
DDX55-206ENST00000539934 MT1HL1P0DM35 61 aa7□□□□□ -1.29
DDX55-206ENST00000539934 MUC2Q02817 5179 aa7□□□□□ -1.29
DDX55-206ENST00000539934 LPAP08519 4548 aa6.99□□□□□ -1.29
DDX55-206ENST00000539934 A0A1B0GU33 70 aa6.98□□□□□ -1.29
DDX55-206ENST00000539934 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
DDX55-206ENST00000539934 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
DDX55-206ENST00000539934 MRPL34Q9BQ48 92 aaKnown RBP6.96□□□□□ -1.3
DDX55-206ENST00000539934 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
DDX55-206ENST00000539934 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
DDX55-206ENST00000539934 SPINK6Q6UWN8 80 aa6.93□□□□□ -1.3
DDX55-206ENST00000539934 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
DDX55-206ENST00000539934 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
DDX55-206ENST00000539934 SPINK1P00995 79 aa6.8□□□□□ -1.32
DDX55-206ENST00000539934 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
DDX55-206ENST00000539934 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
DDX55-206ENST00000539934 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
DDX55-206ENST00000539934 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
DDX55-206ENST00000539934 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
DDX55-206ENST00000539934 FSIP2Q5CZC0 6907 aa6.72□□□□□ -1.33
DDX55-206ENST00000539934 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
DDX55-206ENST00000539934 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
DDX55-206ENST00000539934 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
DDX55-206ENST00000539934 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
DDX55-206ENST00000539934 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
DDX55-206ENST00000539934 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
DDX55-206ENST00000539934 RPL37P61927 97 aaKnown RBP6.6□□□□□ -1.35
DDX55-206ENST00000539934 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
DDX55-206ENST00000539934 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
DDX55-206ENST00000539934 LCE2AQ5TA79 106 aaPredicted RBP6.54□□□□□ -1.36
DDX55-206ENST00000539934 R4GN34 69 aa6.52□□□□□ -1.37
DDX55-206ENST00000539934 XP32Q5T750 250 aa6.41□□□□□ -1.38
DDX55-206ENST00000539934 LCE2BO14633 110 aa6.35□□□□□ -1.39
DDX55-206ENST00000539934 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
DDX55-206ENST00000539934 INE1O15225 51 aa6.35□□□□□ -1.39
DDX55-206ENST00000539934 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
DDX55-206ENST00000539934 S4R3F8 94 aa6.24□□□□□ -1.41
DDX55-206ENST00000539934 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
DDX55-206ENST00000539934 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
DDX55-206ENST00000539934 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
DDX55-206ENST00000539934 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.43
DDX55-206ENST00000539934 A0A0D9SG42 100 aa6.12□□□□□ -1.43
DDX55-206ENST00000539934 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
DDX55-206ENST00000539934 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
DDX55-206ENST00000539934 MT1HP80294 61 aa6.01□□□□□ -1.45
DDX55-206ENST00000539934 USH2AO75445 5202 aa6□□□□□ -1.45
DDX55-206ENST00000539934 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
DDX55-206ENST00000539934 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
DDX55-206ENST00000539934 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
DDX55-206ENST00000539934 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
DDX55-206ENST00000539934 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
DDX55-206ENST00000539934 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
DDX55-206ENST00000539934 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
DDX55-206ENST00000539934 M0R2T5 61 aa5.91□□□□□ -1.46
DDX55-206ENST00000539934 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
DDX55-206ENST00000539934 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
DDX55-206ENST00000539934 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
DDX55-206ENST00000539934 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
DDX55-206ENST00000539934 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
DDX55-206ENST00000539934 M0QZ58 72 aa5.68□□□□□ -1.5
DDX55-206ENST00000539934 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
DDX55-206ENST00000539934 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
DDX55-206ENST00000539934 MT2AP02795 61 aa5.49□□□□□ -1.53
DDX55-206ENST00000539934 MT1FP04733 61 aa5.48□□□□□ -1.53
DDX55-206ENST00000539934 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
DDX55-206ENST00000539934 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
DDX55-206ENST00000539934 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
DDX55-206ENST00000539934 NEBP20929 6669 aa5.38□□□□□ -1.55
DDX55-206ENST00000539934 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
DDX55-206ENST00000539934 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
DDX55-206ENST00000539934 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
DDX55-206ENST00000539934 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
DDX55-206ENST00000539934 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
DDX55-206ENST00000539934 KMT2DO14686 5537 aa5.15□□□□□ -1.58
DDX55-206ENST00000539934 TNP1P09430 55 aa5.06□□□□□ -1.6
DDX55-206ENST00000539934 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
DDX55-206ENST00000539934 MT1BP07438 61 aa4.97□□□□□ -1.61
DDX55-206ENST00000539934 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
DDX55-206ENST00000539934 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
DDX55-206ENST00000539934 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
DDX55-206ENST00000539934 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
DDX55-206ENST00000539934 MT1XP80297 61 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms