RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 PMAIP1Q13794 54 aa9.84□□□□□ -0.83
COPS7A-210ENST00000539735 LPAP08519 4548 aa9.83□□□□□ -0.84
COPS7A-210ENST00000539735 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
COPS7A-210ENST00000539735 A6NN06 94 aa9.72□□□□□ -0.85
COPS7A-210ENST00000539735 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
COPS7A-210ENST00000539735 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
COPS7A-210ENST00000539735 UQCR11O14957 56 aa9.66□□□□□ -0.86
COPS7A-210ENST00000539735 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
COPS7A-210ENST00000539735 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
COPS7A-210ENST00000539735 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
COPS7A-210ENST00000539735 SEC61GP60059 68 aa9.61□□□□□ -0.87
COPS7A-210ENST00000539735 MIR22HGQ0VDD5 57 aa9.61□□□□□ -0.87
COPS7A-210ENST00000539735 XP32Q5T750 250 aa9.59□□□□□ -0.87
COPS7A-210ENST00000539735 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
COPS7A-210ENST00000539735 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
COPS7A-210ENST00000539735 MUC2Q02817 5179 aa9.51□□□□□ -0.89
COPS7A-210ENST00000539735 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
COPS7A-210ENST00000539735 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
COPS7A-210ENST00000539735 A0A1B0GU33 70 aa9.35□□□□□ -0.91
COPS7A-210ENST00000539735 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
COPS7A-210ENST00000539735 H0YAA0 97 aa9.33□□□□□ -0.92
COPS7A-210ENST00000539735 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
COPS7A-210ENST00000539735 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
COPS7A-210ENST00000539735 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
COPS7A-210ENST00000539735 S4R3F8 94 aa9.21□□□□□ -0.93
COPS7A-210ENST00000539735 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
COPS7A-210ENST00000539735 ADM2Q7Z4H4 148 aa9.15□□□□□ -0.94
COPS7A-210ENST00000539735 FAT4Q6V0I7 4981 aa9.15□□□□□ -0.94
COPS7A-210ENST00000539735 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
COPS7A-210ENST00000539735 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
COPS7A-210ENST00000539735 K7ERS5 55 aa9.05□□□□□ -0.96
COPS7A-210ENST00000539735 KRTAP13-4Q3LI77 160 aa8.96□□□□□ -0.98
COPS7A-210ENST00000539735 CSAG1Q6PB30 78 aa8.96□□□□□ -0.98
COPS7A-210ENST00000539735 P0C880 135 aa8.93□□□□□ -0.98
COPS7A-210ENST00000539735 KRTAP19-2Q3LHN2 52 aa8.92□□□□□ -0.98
COPS7A-210ENST00000539735 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
COPS7A-210ENST00000539735 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
COPS7A-210ENST00000539735 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
COPS7A-210ENST00000539735 A0A0D9SG42 100 aa8.84□□□□□ -0.99
COPS7A-210ENST00000539735 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
COPS7A-210ENST00000539735 ROMO1P60602 79 aa8.79□□□□□ -1
COPS7A-210ENST00000539735 MT1HP80294 61 aa8.78□□□□□ -1
COPS7A-210ENST00000539735 M0QZ58 72 aa8.75□□□□□ -1.01
COPS7A-210ENST00000539735 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
COPS7A-210ENST00000539735 M0R2T5 61 aa8.73□□□□□ -1.01
COPS7A-210ENST00000539735 KRTAP12-2P59991 146 aa8.67□□□□□ -1.02
COPS7A-210ENST00000539735 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
COPS7A-210ENST00000539735 SPINT4Q6UDR6 99 aa8.58□□□□□ -1.04
COPS7A-210ENST00000539735 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
COPS7A-210ENST00000539735 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
COPS7A-210ENST00000539735 R4GN34 69 aa8.52□□□□□ -1.04
COPS7A-210ENST00000539735 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
COPS7A-210ENST00000539735 KRTAP9-8Q9BYQ0 159 aa8.36□□□□□ -1.07
COPS7A-210ENST00000539735 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
COPS7A-210ENST00000539735 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
COPS7A-210ENST00000539735 MT2AP02795 61 aa8.28□□□□□ -1.08
COPS7A-210ENST00000539735 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
COPS7A-210ENST00000539735 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
COPS7A-210ENST00000539735 MT1FP04733 61 aa8.22□□□□□ -1.09
COPS7A-210ENST00000539735 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
COPS7A-210ENST00000539735 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
COPS7A-210ENST00000539735 USH2AO75445 5202 aa8.03□□□□□ -1.12
COPS7A-210ENST00000539735 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
COPS7A-210ENST00000539735 LCE2BO14633 110 aa7.97□□□□□ -1.13
COPS7A-210ENST00000539735 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
COPS7A-210ENST00000539735 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.13
COPS7A-210ENST00000539735 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
COPS7A-210ENST00000539735 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
COPS7A-210ENST00000539735 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
COPS7A-210ENST00000539735 SSPOA2VEC9 5147 aa7.9□□□□□ -1.15
COPS7A-210ENST00000539735 TNP1P09430 55 aa7.78□□□□□ -1.16
COPS7A-210ENST00000539735 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
COPS7A-210ENST00000539735 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
COPS7A-210ENST00000539735 H3BS24 57 aa7.75□□□□□ -1.17
COPS7A-210ENST00000539735 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
COPS7A-210ENST00000539735 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
COPS7A-210ENST00000539735 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
COPS7A-210ENST00000539735 KRTAP19-6Q3LI70 58 aa7.62□□□□□ -1.19
COPS7A-210ENST00000539735 MT1BP07438 61 aa7.62□□□□□ -1.19
COPS7A-210ENST00000539735 MT1XP80297 61 aa7.41□□□□□ -1.22
COPS7A-210ENST00000539735 KRTAP10-5P60370 271 aa7.4□□□□□ -1.23
COPS7A-210ENST00000539735 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
COPS7A-210ENST00000539735 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
COPS7A-210ENST00000539735 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
COPS7A-210ENST00000539735 LCE3AQ5TA76 89 aa7.34□□□□□ -1.24
COPS7A-210ENST00000539735 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
COPS7A-210ENST00000539735 SYNE2Q8WXH0 6885 aaKnown RBP7.28□□□□□ -1.24
COPS7A-210ENST00000539735 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
COPS7A-210ENST00000539735 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
COPS7A-210ENST00000539735 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
COPS7A-210ENST00000539735 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
COPS7A-210ENST00000539735 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
COPS7A-210ENST00000539735 KMT2DO14686 5537 aa7.03□□□□□ -1.28
COPS7A-210ENST00000539735 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
COPS7A-210ENST00000539735 KRTAP6-3Q3LI67 103 aa7.01□□□□□ -1.29
COPS7A-210ENST00000539735 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
COPS7A-210ENST00000539735 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
COPS7A-210ENST00000539735 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
COPS7A-210ENST00000539735 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
COPS7A-210ENST00000539735 KRTAP5-9P26371 169 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms