RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SPINK7P58062 85 aa5.57□□□□□ -1.52
LEMD3-202ENST00000539442 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
LEMD3-202ENST00000539442 CYP4F30PQ9H0H9 118 aa5.56□□□□□ -1.52
LEMD3-202ENST00000539442 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
LEMD3-202ENST00000539442 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
LEMD3-202ENST00000539442 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
LEMD3-202ENST00000539442 PCP4P48539 62 aa5.53□□□□□ -1.52
LEMD3-202ENST00000539442 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
LEMD3-202ENST00000539442 NDUFC1O43677 76 aa5.51□□□□□ -1.53
LEMD3-202ENST00000539442 HRES1P13985 223 aa5.48□□□□□ -1.53
LEMD3-202ENST00000539442 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
LEMD3-202ENST00000539442 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
LEMD3-202ENST00000539442 CYSTM1Q9H1C7 97 aa5.47□□□□□ -1.53
LEMD3-202ENST00000539442 H7BZZ5 65 aa5.46□□□□□ -1.54
LEMD3-202ENST00000539442 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
LEMD3-202ENST00000539442 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
LEMD3-202ENST00000539442 C4orf26Q17RF5 130 aa5.43□□□□□ -1.54
LEMD3-202ENST00000539442 RBM12B-AS1Q9P1G2 102 aa5.43□□□□□ -1.54
LEMD3-202ENST00000539442 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
LEMD3-202ENST00000539442 A8MUN3 132 aa5.39□□□□□ -1.55
LEMD3-202ENST00000539442 TMEM258P61165 79 aa5.39□□□□□ -1.55
LEMD3-202ENST00000539442 DMAC1Q96GE9 116 aa5.38□□□□□ -1.55
LEMD3-202ENST00000539442 MUC2Q02817 5179 aa5.38□□□□□ -1.55
LEMD3-202ENST00000539442 ATP5EP56381 51 aaPredicted RBP5.37□□□□□ -1.55
LEMD3-202ENST00000539442 FAM236DA0A1B0GTK5 79 aa5.36□□□□□ -1.55
LEMD3-202ENST00000539442 FAM236CP0DP71 79 aa5.36□□□□□ -1.55
LEMD3-202ENST00000539442 ACYP2P14621 99 aa5.33□□□□□ -1.56
LEMD3-202ENST00000539442 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
LEMD3-202ENST00000539442 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
LEMD3-202ENST00000539442 COA5Q86WW8 74 aa5.25□□□□□ -1.57
LEMD3-202ENST00000539442 S4R3F8 94 aa5.25□□□□□ -1.57
LEMD3-202ENST00000539442 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
LEMD3-202ENST00000539442 CHKB-CPT1BH3BT56 60 aa5.23□□□□□ -1.57
LEMD3-202ENST00000539442 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
LEMD3-202ENST00000539442 KRTAP5-11Q6L8G4 156 aa5.22□□□□□ -1.57
LEMD3-202ENST00000539442 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
LEMD3-202ENST00000539442 LCA10Q71F78 164 aa5.21□□□□□ -1.58
LEMD3-202ENST00000539442 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
LEMD3-202ENST00000539442 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
LEMD3-202ENST00000539442 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
LEMD3-202ENST00000539442 MT1HP80294 61 aa5.18□□□□□ -1.58
LEMD3-202ENST00000539442 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
LEMD3-202ENST00000539442 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
LEMD3-202ENST00000539442 M0R2T5 61 aa5.12□□□□□ -1.59
LEMD3-202ENST00000539442 SMIM26A0A096LP01 95 aa5.06□□□□□ -1.6
LEMD3-202ENST00000539442 H0YAA0 97 aa5.06□□□□□ -1.6
LEMD3-202ENST00000539442 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
LEMD3-202ENST00000539442 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
LEMD3-202ENST00000539442 V9GYY9 64 aa5.01□□□□□ -1.61
LEMD3-202ENST00000539442 SEC61GP60059 68 aa5□□□□□ -1.61
LEMD3-202ENST00000539442 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
LEMD3-202ENST00000539442 Q1T7F1 81 aa4.99□□□□□ -1.61
LEMD3-202ENST00000539442 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
LEMD3-202ENST00000539442 A0A1B0GU69 56 aa4.98□□□□□ -1.61
LEMD3-202ENST00000539442 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
LEMD3-202ENST00000539442 MT2AP02795 61 aa4.94□□□□□ -1.62
LEMD3-202ENST00000539442 P0C880 135 aa4.92□□□□□ -1.62
LEMD3-202ENST00000539442 MT1FP04733 61 aa4.9□□□□□ -1.63
LEMD3-202ENST00000539442 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
LEMD3-202ENST00000539442 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
LEMD3-202ENST00000539442 PSPHP1O15172 72 aa4.87□□□□□ -1.63
LEMD3-202ENST00000539442 A0A1B0GU33 70 aa4.86□□□□□ -1.63
LEMD3-202ENST00000539442 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
LEMD3-202ENST00000539442 Q5VV11 94 aa4.85□□□□□ -1.63
LEMD3-202ENST00000539442 M0QZ58 72 aa4.84□□□□□ -1.63
LEMD3-202ENST00000539442 R4GN34 69 aa4.84□□□□□ -1.63
LEMD3-202ENST00000539442 UQCR11O14957 56 aa4.81□□□□□ -1.64
LEMD3-202ENST00000539442 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
LEMD3-202ENST00000539442 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
LEMD3-202ENST00000539442 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
LEMD3-202ENST00000539442 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
LEMD3-202ENST00000539442 A6NED7 52 aa4.75□□□□□ -1.65
LEMD3-202ENST00000539442 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
LEMD3-202ENST00000539442 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
LEMD3-202ENST00000539442 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
LEMD3-202ENST00000539442 LINC01554Q52M75 96 aa4.7□□□□□ -1.66
LEMD3-202ENST00000539442 A6NN06 94 aa4.69□□□□□ -1.66
LEMD3-202ENST00000539442 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
LEMD3-202ENST00000539442 A0A0D9SG42 100 aa4.67□□□□□ -1.66
LEMD3-202ENST00000539442 KRTAP4-4Q9BYR3 166 aa4.67□□□□□ -1.66
LEMD3-202ENST00000539442 A8MU10 97 aa4.66□□□□□ -1.66
LEMD3-202ENST00000539442 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
LEMD3-202ENST00000539442 USH2AO75445 5202 aa4.62□□□□□ -1.67
LEMD3-202ENST00000539442 MT1BP07438 61 aa4.62□□□□□ -1.67
LEMD3-202ENST00000539442 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
LEMD3-202ENST00000539442 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
LEMD3-202ENST00000539442 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
LEMD3-202ENST00000539442 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
LEMD3-202ENST00000539442 K7ERS5 55 aa4.57□□□□□ -1.68
LEMD3-202ENST00000539442 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
LEMD3-202ENST00000539442 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
LEMD3-202ENST00000539442 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
LEMD3-202ENST00000539442 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
LEMD3-202ENST00000539442 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
LEMD3-202ENST00000539442 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
LEMD3-202ENST00000539442 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
LEMD3-202ENST00000539442 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
LEMD3-202ENST00000539442 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
LEMD3-202ENST00000539442 MT1XP80297 61 aa4.43□□□□□ -1.7
LEMD3-202ENST00000539442 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms