RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 FAT1Q14517 4588 aa6.4□□□□□ -1.39
NEK6-212ENST00000539416 K7ERS5 55 aa6.39□□□□□ -1.39
NEK6-212ENST00000539416 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
NEK6-212ENST00000539416 COX6B2Q6YFQ2 88 aa6.39□□□□□ -1.39
NEK6-212ENST00000539416 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
NEK6-212ENST00000539416 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
NEK6-212ENST00000539416 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
NEK6-212ENST00000539416 BIRC6Q9NR09 4857 aa6.32□□□□□ -1.4
NEK6-212ENST00000539416 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
NEK6-212ENST00000539416 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
NEK6-212ENST00000539416 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
NEK6-212ENST00000539416 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
NEK6-212ENST00000539416 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
NEK6-212ENST00000539416 DMBT1Q9UGM3 2413 aaPredicted RBP6.28□□□□□ -1.4
NEK6-212ENST00000539416 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
NEK6-212ENST00000539416 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
NEK6-212ENST00000539416 A0A0D9SG42 100 aa6.25□□□□□ -1.41
NEK6-212ENST00000539416 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
NEK6-212ENST00000539416 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
NEK6-212ENST00000539416 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
NEK6-212ENST00000539416 HERC2O95714 4834 aa6.22□□□□□ -1.41
NEK6-212ENST00000539416 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.42
NEK6-212ENST00000539416 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
NEK6-212ENST00000539416 TNXBP22105 4242 aa6.18□□□□□ -1.42
NEK6-212ENST00000539416 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
NEK6-212ENST00000539416 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
NEK6-212ENST00000539416 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
NEK6-212ENST00000539416 J3QL48 77 aa6.09□□□□□ -1.43
NEK6-212ENST00000539416 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
NEK6-212ENST00000539416 S4R3F8 94 aa6.08□□□□□ -1.44
NEK6-212ENST00000539416 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
NEK6-212ENST00000539416 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
NEK6-212ENST00000539416 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
NEK6-212ENST00000539416 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
NEK6-212ENST00000539416 XP32Q5T750 250 aa5.97□□□□□ -1.45
NEK6-212ENST00000539416 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
NEK6-212ENST00000539416 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
NEK6-212ENST00000539416 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
NEK6-212ENST00000539416 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
NEK6-212ENST00000539416 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
NEK6-212ENST00000539416 M0QZ58 72 aa5.72□□□□□ -1.49
NEK6-212ENST00000539416 LPAP08519 4548 aa5.71□□□□□ -1.49
NEK6-212ENST00000539416 HERC1Q15751 4861 aa5.69□□□□□ -1.5
NEK6-212ENST00000539416 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
NEK6-212ENST00000539416 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
NEK6-212ENST00000539416 LRP2P98164 4655 aa5.65□□□□□ -1.51
NEK6-212ENST00000539416 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
NEK6-212ENST00000539416 R4GN34 69 aa5.54□□□□□ -1.52
NEK6-212ENST00000539416 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
NEK6-212ENST00000539416 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
NEK6-212ENST00000539416 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
NEK6-212ENST00000539416 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
NEK6-212ENST00000539416 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
NEK6-212ENST00000539416 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
NEK6-212ENST00000539416 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
NEK6-212ENST00000539416 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
NEK6-212ENST00000539416 MUC2Q02817 5179 aa5.27□□□□□ -1.57
NEK6-212ENST00000539416 MT1HP80294 61 aa5.25□□□□□ -1.57
NEK6-212ENST00000539416 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
NEK6-212ENST00000539416 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
NEK6-212ENST00000539416 M0R2T5 61 aa5.15□□□□□ -1.58
NEK6-212ENST00000539416 TNP1P09430 55 aa5.15□□□□□ -1.59
NEK6-212ENST00000539416 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
NEK6-212ENST00000539416 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
NEK6-212ENST00000539416 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.6
NEK6-212ENST00000539416 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
NEK6-212ENST00000539416 MT2AP02795 61 aa5.03□□□□□ -1.6
NEK6-212ENST00000539416 MT1FP04733 61 aa4.98□□□□□ -1.61
NEK6-212ENST00000539416 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
NEK6-212ENST00000539416 INE1O15225 51 aa4.95□□□□□ -1.62
NEK6-212ENST00000539416 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
NEK6-212ENST00000539416 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
NEK6-212ENST00000539416 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
NEK6-212ENST00000539416 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
NEK6-212ENST00000539416 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
NEK6-212ENST00000539416 LCE2BO14633 110 aa4.74□□□□□ -1.65
NEK6-212ENST00000539416 MT1BP07438 61 aa4.71□□□□□ -1.66
NEK6-212ENST00000539416 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
NEK6-212ENST00000539416 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
NEK6-212ENST00000539416 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
NEK6-212ENST00000539416 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
NEK6-212ENST00000539416 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
NEK6-212ENST00000539416 USH2AO75445 5202 aa4.54□□□□□ -1.68
NEK6-212ENST00000539416 MT1XP80297 61 aa4.53□□□□□ -1.68
NEK6-212ENST00000539416 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
NEK6-212ENST00000539416 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
NEK6-212ENST00000539416 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
NEK6-212ENST00000539416 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
NEK6-212ENST00000539416 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
NEK6-212ENST00000539416 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
NEK6-212ENST00000539416 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
NEK6-212ENST00000539416 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
NEK6-212ENST00000539416 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
NEK6-212ENST00000539416 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
NEK6-212ENST00000539416 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
NEK6-212ENST00000539416 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
NEK6-212ENST00000539416 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
NEK6-212ENST00000539416 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
NEK6-212ENST00000539416 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
NEK6-212ENST00000539416 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms