RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 A6NED7 52 aa13.24□□□□□ -0.29
KLHL42-202ENST00000539176 COX6B2Q6YFQ2 88 aa13.24□□□□□ -0.29
KLHL42-202ENST00000539176 KRTAP3-1Q9BYR8 98 aa13.22□□□□□ -0.29
KLHL42-202ENST00000539176 A0A1B0GU69 56 aa13.21□□□□□ -0.3
KLHL42-202ENST00000539176 CDC42SE1Q9NRR8 79 aa13.11□□□□□ -0.31
KLHL42-202ENST00000539176 SEC61BP60468 96 aaKnown RBP13.1□□□□□ -0.31
KLHL42-202ENST00000539176 LCA10Q71F78 164 aa13.05□□□□□ -0.32
KLHL42-202ENST00000539176 SEC61GP60059 68 aa13.02□□□□□ -0.32
KLHL42-202ENST00000539176 MUC17Q685J3 4493 aa13.01□□□□□ -0.33
KLHL42-202ENST00000539176 KRTAP4-1Q9BYQ7 146 aa12.99□□□□□ -0.33
KLHL42-202ENST00000539176 A8MU10 97 aa12.97□□□□□ -0.33
KLHL42-202ENST00000539176 UQCR11O14957 56 aa12.93□□□□□ -0.34
KLHL42-202ENST00000539176 SPATA8Q6RVD6 105 aa12.84□□□□□ -0.35
KLHL42-202ENST00000539176 MIR22HGQ0VDD5 57 aa12.8□□□□□ -0.36
KLHL42-202ENST00000539176 S4R3F8 94 aa12.79□□□□□ -0.36
KLHL42-202ENST00000539176 H1FX-AS1Q4G0G2 97 aa12.76□□□□□ -0.37
KLHL42-202ENST00000539176 PMAIP1Q13794 54 aa12.75□□□□□ -0.37
KLHL42-202ENST00000539176 RBM12B-AS1Q9P1G2 102 aa12.75□□□□□ -0.37
KLHL42-202ENST00000539176 KRTAP3-3Q9BYR6 98 aa12.73□□□□□ -0.37
KLHL42-202ENST00000539176 UBR4Q5T4S7 5183 aa12.72□□□□□ -0.37
KLHL42-202ENST00000539176 MUC2Q02817 5179 aa12.69□□□□□ -0.38
KLHL42-202ENST00000539176 A0A1B0GU33 70 aa12.64□□□□□ -0.39
KLHL42-202ENST00000539176 RNF213Q63HN8 5207 aa12.63□□□□□ -0.39
KLHL42-202ENST00000539176 A6NN06 94 aa12.61□□□□□ -0.39
KLHL42-202ENST00000539176 KRTAP19-2Q3LHN2 52 aa12.56□□□□□ -0.4
KLHL42-202ENST00000539176 H0YAA0 97 aa12.53□□□□□ -0.4
KLHL42-202ENST00000539176 KRTAP10-6P60371 365 aaPredicted RBP12.45□□□□□ -0.42
KLHL42-202ENST00000539176 CSAG1Q6PB30 78 aa12.44□□□□□ -0.42
KLHL42-202ENST00000539176 KTN1-AS1Q86SY8 53 aa12.42□□□□□ -0.42
KLHL42-202ENST00000539176 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
KLHL42-202ENST00000539176 LCE2CQ5TA81 110 aa12.33□□□□□ -0.44
KLHL42-202ENST00000539176 ADM2Q7Z4H4 148 aa12.26□□□□□ -0.45
KLHL42-202ENST00000539176 FLGP20930 4061 aaPredicted RBP12.25□□□□□ -0.45
KLHL42-202ENST00000539176 P0C880 135 aa12.25□□□□□ -0.45
KLHL42-202ENST00000539176 K7ERS5 55 aa12.19□□□□□ -0.46
KLHL42-202ENST00000539176 FAT4Q6V0I7 4981 aa12.17□□□□□ -0.46
KLHL42-202ENST00000539176 KRTAP13-4Q3LI77 160 aa12.16□□□□□ -0.46
KLHL42-202ENST00000539176 MT1HP80294 61 aa12.08□□□□□ -0.48
KLHL42-202ENST00000539176 M0QZ58 72 aa12.07□□□□□ -0.48
KLHL42-202ENST00000539176 A0A0D9SG42 100 aa11.99□□□□□ -0.49
KLHL42-202ENST00000539176 M0R2T5 61 aa11.95□□□□□ -0.5
KLHL42-202ENST00000539176 PRAC1Q96KF2 57 aa11.83□□□□□ -0.52
KLHL42-202ENST00000539176 R4GN34 69 aa11.82□□□□□ -0.52
KLHL42-202ENST00000539176 KRTAP12-1P59990 96 aa11.76□□□□□ -0.53
KLHL42-202ENST00000539176 KRTAP12-2P59991 146 aa11.74□□□□□ -0.53
KLHL42-202ENST00000539176 ROMO1P60602 79 aa11.72□□□□□ -0.53
KLHL42-202ENST00000539176 LORP23490 312 aaPredicted RBP11.68□□□□□ -0.54
KLHL42-202ENST00000539176 SPINT4Q6UDR6 99 aa11.68□□□□□ -0.54
KLHL42-202ENST00000539176 LCE2AQ5TA79 106 aaPredicted RBP11.66□□□□□ -0.54
KLHL42-202ENST00000539176 KRTAP9-8Q9BYQ0 159 aa11.61□□□□□ -0.55
KLHL42-202ENST00000539176 MT2AP02795 61 aa11.58□□□□□ -0.56
KLHL42-202ENST00000539176 LINC01554Q52M75 96 aa11.58□□□□□ -0.56
KLHL42-202ENST00000539176 CRIPTQ9P021 101 aa11.57□□□□□ -0.56
KLHL42-202ENST00000539176 MT1FP04733 61 aa11.53□□□□□ -0.56
KLHL42-202ENST00000539176 KRTAP25-1Q3LHN0 102 aa11.51□□□□□ -0.57
KLHL42-202ENST00000539176 KRTAP10-10P60014 251 aa11.48□□□□□ -0.57
KLHL42-202ENST00000539176 KRTAP19-1Q8IUB9 90 aa11.26□□□□□ -0.61
KLHL42-202ENST00000539176 SPRR2GQ9BYE4 73 aa11.21□□□□□ -0.61
KLHL42-202ENST00000539176 KRTAP9-3Q9BYQ3 159 aa11.19□□□□□ -0.62
KLHL42-202ENST00000539176 CAMK2N1Q7Z7J9 78 aa11.13□□□□□ -0.63
KLHL42-202ENST00000539176 C10orf95Q9H7T3 257 aa11.07□□□□□ -0.64
KLHL42-202ENST00000539176 LCE2BO14633 110 aa10.94□□□□□ -0.66
KLHL42-202ENST00000539176 KRTAP19-8Q3LI54 63 aa10.94□□□□□ -0.66
KLHL42-202ENST00000539176 PLAC4Q8WY50 150 aa10.89□□□□□ -0.67
KLHL42-202ENST00000539176 MT1BP07438 61 aa10.87□□□□□ -0.67
KLHL42-202ENST00000539176 PP632Q6XCG6 107 aa10.74□□□□□ -0.69
KLHL42-202ENST00000539176 USH2AO75445 5202 aa10.7□□□□□ -0.7
KLHL42-202ENST00000539176 TNP1P09430 55 aa10.7□□□□□ -0.7
KLHL42-202ENST00000539176 KRTAP23-1A1A580 65 aa10.59□□□□□ -0.71
KLHL42-202ENST00000539176 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
KLHL42-202ENST00000539176 MT1XP80297 61 aa10.49□□□□□ -0.73
KLHL42-202ENST00000539176 KRTAP10-5P60370 271 aa10.47□□□□□ -0.73
KLHL42-202ENST00000539176 SSPOA2VEC9 5147 aa10.37□□□□□ -0.75
KLHL42-202ENST00000539176 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
KLHL42-202ENST00000539176 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
KLHL42-202ENST00000539176 KRTAP15-1Q3LI76 137 aa10.3□□□□□ -0.76
KLHL42-202ENST00000539176 PRO2289Q9P1D8 64 aa10.28□□□□□ -0.76
KLHL42-202ENST00000539176 KRTAP19-6Q3LI70 58 aa10.22□□□□□ -0.77
KLHL42-202ENST00000539176 KRTAP10-7P60409 375 aaPredicted RBP10.1□□□□□ -0.79
KLHL42-202ENST00000539176 LCE3AQ5TA76 89 aa10.1□□□□□ -0.79
KLHL42-202ENST00000539176 KRTAP10-12P60413 245 aa10□□□□□ -0.81
KLHL42-202ENST00000539176 KRTAP8-1Q8IUC2 63 aa9.97□□□□□ -0.81
KLHL42-202ENST00000539176 FCGBPQ9Y6R7 5405 aaPredicted RBP9.96□□□□□ -0.82
KLHL42-202ENST00000539176 CRCT1Q9UGL9 99 aa9.91□□□□□ -0.82
KLHL42-202ENST00000539176 KMT2DO14686 5537 aa9.79□□□□□ -0.84
KLHL42-202ENST00000539176 KRTAP4-8A0A0G2JLE6 195 aa9.76□□□□□ -0.85
KLHL42-202ENST00000539176 KRTAP4-8Q9BYQ9 185 aa9.76□□□□□ -0.85
KLHL42-202ENST00000539176 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
KLHL42-202ENST00000539176 KRTAP12-3P60328 96 aa9.71□□□□□ -0.85
KLHL42-202ENST00000539176 SPRR5A0A1B0GTR4 108 aa9.69□□□□□ -0.86
KLHL42-202ENST00000539176 LUZP6Q538Z0 58 aa9.64□□□□□ -0.87
KLHL42-202ENST00000539176 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
KLHL42-202ENST00000539176 KRTAP19-5Q3LI72 72 aa9.47□□□□□ -0.89
KLHL42-202ENST00000539176 MACF1Q9UPN3 7388 aaKnown RBP9.42□□□□□ -0.9
KLHL42-202ENST00000539176 H3BS24 57 aa9.38□□□□□ -0.91
KLHL42-202ENST00000539176 KRTAP19-7Q3SYF9 63 aa9.36□□□□□ -0.91
KLHL42-202ENST00000539176 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
KLHL42-202ENST00000539176 MT1EP04732 61 aa9.19□□□□□ -0.94
KLHL42-202ENST00000539176 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
KLHL42-202ENST00000539176 KRTAP19-4Q3LI73 84 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 534.4 ms