RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KRTAP10-6P60371 365 aaPredicted RBP11.33□□□□□ -0.6
TMEM260-202ENST00000538838 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
TMEM260-202ENST00000538838 LORP23490 312 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-202ENST00000538838 ACYP2P14621 99 aa11.27□□□□□ -0.6
TMEM260-202ENST00000538838 CSAG1Q6PB30 78 aa11.21□□□□□ -0.61
TMEM260-202ENST00000538838 KRTAP9-8Q9BYQ0 159 aa11.16□□□□□ -0.62
TMEM260-202ENST00000538838 CHKB-CPT1BH3BT56 60 aa11.11□□□□□ -0.63
TMEM260-202ENST00000538838 MT2AP02795 61 aa11.09□□□□□ -0.63
TMEM260-202ENST00000538838 COA5Q86WW8 74 aa11.08□□□□□ -0.64
TMEM260-202ENST00000538838 TMEM258P61165 79 aa11.06□□□□□ -0.64
TMEM260-202ENST00000538838 ATP5EP56381 51 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-202ENST00000538838 MT1FP04733 61 aa11.02□□□□□ -0.65
TMEM260-202ENST00000538838 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
TMEM260-202ENST00000538838 KRTAP10-10P60014 251 aa10.96□□□□□ -0.65
TMEM260-202ENST00000538838 H0YAA0 97 aa10.89□□□□□ -0.67
TMEM260-202ENST00000538838 ADM2Q7Z4H4 148 aa10.85□□□□□ -0.67
TMEM260-202ENST00000538838 KRTAP9-3Q9BYQ3 159 aa10.76□□□□□ -0.69
TMEM260-202ENST00000538838 KRTAP3-2Q9BYR7 98 aa10.75□□□□□ -0.69
TMEM260-202ENST00000538838 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-202ENST00000538838 P0C880 135 aa10.73□□□□□ -0.69
TMEM260-202ENST00000538838 SERP1Q9Y6X1 66 aa10.71□□□□□ -0.69
TMEM260-202ENST00000538838 KRTAP9-2Q9BYQ4 174 aa10.65□□□□□ -0.7
TMEM260-202ENST00000538838 CRIPTQ9P021 101 aa10.61□□□□□ -0.71
TMEM260-202ENST00000538838 KRTAP19-1Q8IUB9 90 aa10.6□□□□□ -0.71
TMEM260-202ENST00000538838 LCE2BO14633 110 aa10.58□□□□□ -0.72
TMEM260-202ENST00000538838 RPS28P62857 69 aaKnown RBP10.58□□□□□ -0.72
TMEM260-202ENST00000538838 SPRR2GQ9BYE4 73 aa10.55□□□□□ -0.72
TMEM260-202ENST00000538838 SEC61GP60059 68 aa10.55□□□□□ -0.72
TMEM260-202ENST00000538838 R4GN34 69 aa10.5□□□□□ -0.73
TMEM260-202ENST00000538838 A0A1B0GU69 56 aa10.47□□□□□ -0.73
TMEM260-202ENST00000538838 M0QZ58 72 aa10.47□□□□□ -0.73
TMEM260-202ENST00000538838 USH2AO75445 5202 aa10.45□□□□□ -0.74
TMEM260-202ENST00000538838 LINC01558Q9Y6Z2 57 aa10.44□□□□□ -0.74
TMEM260-202ENST00000538838 KRTAP19-8Q3LI54 63 aa10.37□□□□□ -0.75
TMEM260-202ENST00000538838 FSIP2Q5CZC0 6907 aa10.37□□□□□ -0.75
TMEM260-202ENST00000538838 PRR15LQ9BU68 103 aa10.35□□□□□ -0.75
TMEM260-202ENST00000538838 KRTAP13-4Q3LI77 160 aa10.34□□□□□ -0.75
TMEM260-202ENST00000538838 SMIM26A0A096LP01 95 aa10.33□□□□□ -0.76
TMEM260-202ENST00000538838 A0A1B0GU33 70 aa10.33□□□□□ -0.76
TMEM260-202ENST00000538838 Q5VV11 94 aa10.31□□□□□ -0.76
TMEM260-202ENST00000538838 MT1BP07438 61 aa10.3□□□□□ -0.76
TMEM260-202ENST00000538838 LINC01554Q52M75 96 aa10.3□□□□□ -0.76
TMEM260-202ENST00000538838 Q1T7F1 81 aa10.27□□□□□ -0.77
TMEM260-202ENST00000538838 V9GYY9 64 aa10.26□□□□□ -0.77
TMEM260-202ENST00000538838 SPATA8Q6RVD6 105 aa10.22□□□□□ -0.77
TMEM260-202ENST00000538838 SSPOA2VEC9 5147 aa10.21□□□□□ -0.77
TMEM260-202ENST00000538838 PSPHP1O15172 72 aa10.17□□□□□ -0.78
TMEM260-202ENST00000538838 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
TMEM260-202ENST00000538838 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
TMEM260-202ENST00000538838 A0A0D9SG42 100 aa10.09□□□□□ -0.79
TMEM260-202ENST00000538838 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
TMEM260-202ENST00000538838 A6NN06 94 aa10.04□□□□□ -0.8
TMEM260-202ENST00000538838 KRTAP19-6Q3LI70 58 aa10.04□□□□□ -0.8
TMEM260-202ENST00000538838 UQCR11O14957 56 aa10.04□□□□□ -0.8
TMEM260-202ENST00000538838 KRTAP9-6A0A140TA67 174 aa10.03□□□□□ -0.8
TMEM260-202ENST00000538838 A8MU10 97 aa10.01□□□□□ -0.81
TMEM260-202ENST00000538838 KRTAP12-1P59990 96 aa9.89□□□□□ -0.83
TMEM260-202ENST00000538838 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
TMEM260-202ENST00000538838 KRTAP10-5P60370 271 aa9.89□□□□□ -0.83
TMEM260-202ENST00000538838 SPINT4Q6UDR6 99 aa9.89□□□□□ -0.83
TMEM260-202ENST00000538838 FCGBPQ9Y6R7 5405 aaPredicted RBP9.85□□□□□ -0.83
TMEM260-202ENST00000538838 A6NED7 52 aa9.85□□□□□ -0.83
TMEM260-202ENST00000538838 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
TMEM260-202ENST00000538838 MT1XP80297 61 aa9.84□□□□□ -0.83
TMEM260-202ENST00000538838 CAMK2N1Q7Z7J9 78 aa9.77□□□□□ -0.85
TMEM260-202ENST00000538838 PRO2289Q9P1D8 64 aa9.77□□□□□ -0.85
TMEM260-202ENST00000538838 PRO0628Q9UI54 55 aa9.7□□□□□ -0.86
TMEM260-202ENST00000538838 BRK1Q8WUW1 75 aa9.6□□□□□ -0.87
TMEM260-202ENST00000538838 CDC42SE1Q9NRR8 79 aa9.57□□□□□ -0.88
TMEM260-202ENST00000538838 K7ERS5 55 aa9.52□□□□□ -0.89
TMEM260-202ENST00000538838 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-202ENST00000538838 MACF1Q9UPN3 7388 aaKnown RBP9.44□□□□□ -0.9
TMEM260-202ENST00000538838 KRTAP10-7P60409 375 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-202ENST00000538838 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
TMEM260-202ENST00000538838 KRTAP10-12P60413 245 aa9.33□□□□□ -0.92
TMEM260-202ENST00000538838 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
TMEM260-202ENST00000538838 KMT2DO14686 5537 aa9.22□□□□□ -0.93
TMEM260-202ENST00000538838 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
TMEM260-202ENST00000538838 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
TMEM260-202ENST00000538838 TNP1P09430 55 aa9.18□□□□□ -0.94
TMEM260-202ENST00000538838 KRTAP9-7A8MTY7 169 aa9.11□□□□□ -0.95
TMEM260-202ENST00000538838 KRTAP8-1Q8IUC2 63 aa9.09□□□□□ -0.95
TMEM260-202ENST00000538838 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
TMEM260-202ENST00000538838 ROMO1P60602 79 aa9.05□□□□□ -0.96
TMEM260-202ENST00000538838 KRTAP6-3Q3LI67 103 aa9.04□□□□□ -0.96
TMEM260-202ENST00000538838 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.96
TMEM260-202ENST00000538838 KRTAP5-9P26371 169 aa8.95□□□□□ -0.98
TMEM260-202ENST00000538838 LCE3AQ5TA76 89 aa8.94□□□□□ -0.98
TMEM260-202ENST00000538838 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
TMEM260-202ENST00000538838 SPRR2FQ96RM1 72 aa8.9□□□□□ -0.99
TMEM260-202ENST00000538838 KRTAP19-7Q3SYF9 63 aa8.79□□□□□ -1
TMEM260-202ENST00000538838 KRTAP19-5Q3LI72 72 aa8.76□□□□□ -1.01
TMEM260-202ENST00000538838 MUC12Q9UKN1 5478 aa8.73□□□□□ -1.01
TMEM260-202ENST00000538838 KRTAP23-1A1A580 65 aa8.69□□□□□ -1.02
TMEM260-202ENST00000538838 MT1EP04732 61 aa8.66□□□□□ -1.02
TMEM260-202ENST00000538838 MDN1Q9NU22 5596 aa8.63□□□□□ -1.03
TMEM260-202ENST00000538838 SPRR2EP22531 72 aa8.59□□□□□ -1.03
TMEM260-202ENST00000538838 SPRR2BP35325 72 aa8.59□□□□□ -1.03
TMEM260-202ENST00000538838 SPRR2AP35326 72 aa8.59□□□□□ -1.03
TMEM260-202ENST00000538838 KRTAP12-3P60328 96 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms