RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 VPS13CQ709C8 3753 aa5.69□□□□□ -1.5
KDM2B-209ENST00000538503 TRRAPQ9Y4A5 3859 aa5.69□□□□□ -1.5
KDM2B-209ENST00000538503 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
KDM2B-209ENST00000538503 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
KDM2B-209ENST00000538503 SPRR2DP22532 72 aa5.61□□□□□ -1.51
KDM2B-209ENST00000538503 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
KDM2B-209ENST00000538503 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
KDM2B-209ENST00000538503 CSMD3Q7Z407 3707 aa5.59□□□□□ -1.52
KDM2B-209ENST00000538503 SRRM2Q9UQ35 2752 aaKnown RBP5.54□□□□□ -1.52
KDM2B-209ENST00000538503 MEGF8Q7Z7M0 2845 aa5.52□□□□□ -1.53
KDM2B-209ENST00000538503 DNAH1Q9P2D7 4330 aa5.51□□□□□ -1.53
KDM2B-209ENST00000538503 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
KDM2B-209ENST00000538503 MT2AP02795 61 aa5.45□□□□□ -1.54
KDM2B-209ENST00000538503 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
KDM2B-209ENST00000538503 AKAP9Q99996 3911 aa5.4□□□□□ -1.54
KDM2B-209ENST00000538503 LCE2BO14633 110 aa5.39□□□□□ -1.55
KDM2B-209ENST00000538503 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
KDM2B-209ENST00000538503 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
KDM2B-209ENST00000538503 DNAH9Q9NYC9 4486 aa5.32□□□□□ -1.56
KDM2B-209ENST00000538503 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
KDM2B-209ENST00000538503 MT1FP04733 61 aa5.29□□□□□ -1.56
KDM2B-209ENST00000538503 ZNF469Q96JG9 3925 aaPredicted RBP5.26□□□□□ -1.57
KDM2B-209ENST00000538503 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
KDM2B-209ENST00000538503 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
KDM2B-209ENST00000538503 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
KDM2B-209ENST00000538503 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
KDM2B-209ENST00000538503 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
KDM2B-209ENST00000538503 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
KDM2B-209ENST00000538503 DNAH11Q96DT5 4516 aa5.12□□□□□ -1.59
KDM2B-209ENST00000538503 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
KDM2B-209ENST00000538503 DNAH2Q9P225 4427 aa5.12□□□□□ -1.59
KDM2B-209ENST00000538503 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
KDM2B-209ENST00000538503 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
KDM2B-209ENST00000538503 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
KDM2B-209ENST00000538503 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
KDM2B-209ENST00000538503 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
KDM2B-209ENST00000538503 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
KDM2B-209ENST00000538503 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
KDM2B-209ENST00000538503 VPS13DQ5THJ4 4388 aa4.98□□□□□ -1.61
KDM2B-209ENST00000538503 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
KDM2B-209ENST00000538503 FRAS1Q86XX4 4008 aa4.98□□□□□ -1.61
KDM2B-209ENST00000538503 MT4P47944 62 aa4.96□□□□□ -1.61
KDM2B-209ENST00000538503 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
KDM2B-209ENST00000538503 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
KDM2B-209ENST00000538503 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
KDM2B-209ENST00000538503 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
KDM2B-209ENST00000538503 STARD9Q9P2P6 4700 aa4.89□□□□□ -1.63
KDM2B-209ENST00000538503 ANK2Q01484 3957 aa4.88□□□□□ -1.63
KDM2B-209ENST00000538503 LRP1BQ9NZR2 4599 aa4.88□□□□□ -1.63
KDM2B-209ENST00000538503 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
KDM2B-209ENST00000538503 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
KDM2B-209ENST00000538503 DYNC2H1Q8NCM8 4307 aaKnown RBP4.87□□□□□ -1.63
KDM2B-209ENST00000538503 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
KDM2B-209ENST00000538503 KMT2AQ03164 3969 aa4.83□□□□□ -1.64
KDM2B-209ENST00000538503 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
KDM2B-209ENST00000538503 MT1GP13640 62 aa4.82□□□□□ -1.64
KDM2B-209ENST00000538503 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
KDM2B-209ENST00000538503 SACSQ9NZJ4 4579 aa4.77□□□□□ -1.65
KDM2B-209ENST00000538503 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
KDM2B-209ENST00000538503 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
KDM2B-209ENST00000538503 FAT1Q14517 4588 aa4.76□□□□□ -1.65
KDM2B-209ENST00000538503 VPS13BQ7Z7G8 4022 aa4.76□□□□□ -1.65
KDM2B-209ENST00000538503 DNHD1Q96M86 4753 aa4.75□□□□□ -1.65
KDM2B-209ENST00000538503 LYSTQ99698 3801 aa4.71□□□□□ -1.66
KDM2B-209ENST00000538503 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
KDM2B-209ENST00000538503 HERC1Q15751 4861 aa4.67□□□□□ -1.66
KDM2B-209ENST00000538503 RYR1P21817 5038 aa4.65□□□□□ -1.66
KDM2B-209ENST00000538503 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
KDM2B-209ENST00000538503 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
KDM2B-209ENST00000538503 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
KDM2B-209ENST00000538503 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
KDM2B-209ENST00000538503 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
KDM2B-209ENST00000538503 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
KDM2B-209ENST00000538503 RYR3Q15413 4870 aa4.59□□□□□ -1.68
KDM2B-209ENST00000538503 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
KDM2B-209ENST00000538503 MT1XP80297 61 aa4.57□□□□□ -1.68
KDM2B-209ENST00000538503 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
KDM2B-209ENST00000538503 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
KDM2B-209ENST00000538503 MT1BP07438 61 aa4.54□□□□□ -1.68
KDM2B-209ENST00000538503 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
KDM2B-209ENST00000538503 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
KDM2B-209ENST00000538503 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
KDM2B-209ENST00000538503 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
KDM2B-209ENST00000538503 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
KDM2B-209ENST00000538503 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
KDM2B-209ENST00000538503 HERC2O95714 4834 aa4.43□□□□□ -1.7
KDM2B-209ENST00000538503 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
KDM2B-209ENST00000538503 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
KDM2B-209ENST00000538503 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
KDM2B-209ENST00000538503 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
KDM2B-209ENST00000538503 HSPG2P98160 4391 aa4.37□□□□□ -1.71
KDM2B-209ENST00000538503 MT3P25713 68 aa4.36□□□□□ -1.71
KDM2B-209ENST00000538503 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
KDM2B-209ENST00000538503 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
KDM2B-209ENST00000538503 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
KDM2B-209ENST00000538503 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
KDM2B-209ENST00000538503 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
KDM2B-209ENST00000538503 PKD1P98161 4303 aa4.28□□□□□ -1.72
KDM2B-209ENST00000538503 LPAP08519 4548 aa4.27□□□□□ -1.73
KDM2B-209ENST00000538503 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms