RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 LCA10Q71F78 164 aa9.62□□□□□ -0.87
EFCAB11-202ENST00000538485 S4R3F8 94 aa9.62□□□□□ -0.87
EFCAB11-202ENST00000538485 FLGP20930 4061 aaPredicted RBP9.59□□□□□ -0.87
EFCAB11-202ENST00000538485 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
EFCAB11-202ENST00000538485 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
EFCAB11-202ENST00000538485 SMIM26A0A096LP01 95 aa9.51□□□□□ -0.89
EFCAB11-202ENST00000538485 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
EFCAB11-202ENST00000538485 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
EFCAB11-202ENST00000538485 MT1HP80294 61 aa9.38□□□□□ -0.91
EFCAB11-202ENST00000538485 Q1T7F1 81 aa9.38□□□□□ -0.91
EFCAB11-202ENST00000538485 LINC01558Q9Y6Z2 57 aa9.35□□□□□ -0.91
EFCAB11-202ENST00000538485 V9GYY9 64 aa9.32□□□□□ -0.92
EFCAB11-202ENST00000538485 A0A1B0GU69 56 aa9.25□□□□□ -0.93
EFCAB11-202ENST00000538485 M0R2T5 61 aa9.25□□□□□ -0.93
EFCAB11-202ENST00000538485 PSPHP1O15172 72 aa9.25□□□□□ -0.93
EFCAB11-202ENST00000538485 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
EFCAB11-202ENST00000538485 SEC61GP60059 68 aa9.21□□□□□ -0.93
EFCAB11-202ENST00000538485 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
EFCAB11-202ENST00000538485 H0YAA0 97 aa9.19□□□□□ -0.94
EFCAB11-202ENST00000538485 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
EFCAB11-202ENST00000538485 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
EFCAB11-202ENST00000538485 Q5VV11 94 aa9.15□□□□□ -0.94
EFCAB11-202ENST00000538485 P0C880 135 aa9.14□□□□□ -0.95
EFCAB11-202ENST00000538485 LCE2AQ5TA79 106 aaPredicted RBP9.11□□□□□ -0.95
EFCAB11-202ENST00000538485 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
EFCAB11-202ENST00000538485 A0A1B0GU33 70 aa9.02□□□□□ -0.96
EFCAB11-202ENST00000538485 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.97
EFCAB11-202ENST00000538485 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
EFCAB11-202ENST00000538485 MT2AP02795 61 aa8.96□□□□□ -0.97
EFCAB11-202ENST00000538485 UQCR11O14957 56 aa8.95□□□□□ -0.98
EFCAB11-202ENST00000538485 A6NED7 52 aa8.94□□□□□ -0.98
EFCAB11-202ENST00000538485 MT1FP04733 61 aa8.92□□□□□ -0.98
EFCAB11-202ENST00000538485 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
EFCAB11-202ENST00000538485 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
EFCAB11-202ENST00000538485 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
EFCAB11-202ENST00000538485 R4GN34 69 aa8.87□□□□□ -0.99
EFCAB11-202ENST00000538485 M0QZ58 72 aa8.85□□□□□ -0.99
EFCAB11-202ENST00000538485 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
EFCAB11-202ENST00000538485 CRIPTQ9P021 101 aa8.82□□□□□ -1
EFCAB11-202ENST00000538485 A8MU10 97 aa8.79□□□□□ -1
EFCAB11-202ENST00000538485 BRK1Q8WUW1 75 aa8.75□□□□□ -1.01
EFCAB11-202ENST00000538485 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
EFCAB11-202ENST00000538485 A0A0D9SG42 100 aa8.72□□□□□ -1.01
EFCAB11-202ENST00000538485 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
EFCAB11-202ENST00000538485 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
EFCAB11-202ENST00000538485 SPRR2GQ9BYE4 73 aa8.71□□□□□ -1.01
EFCAB11-202ENST00000538485 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
EFCAB11-202ENST00000538485 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
EFCAB11-202ENST00000538485 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
EFCAB11-202ENST00000538485 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
EFCAB11-202ENST00000538485 A6NN06 94 aa8.51□□□□□ -1.05
EFCAB11-202ENST00000538485 KRTAP19-8Q3LI54 63 aa8.49□□□□□ -1.05
EFCAB11-202ENST00000538485 LCE2BO14633 110 aa8.49□□□□□ -1.05
EFCAB11-202ENST00000538485 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
EFCAB11-202ENST00000538485 K7ERS5 55 aa8.43□□□□□ -1.06
EFCAB11-202ENST00000538485 MT1BP07438 61 aa8.41□□□□□ -1.06
EFCAB11-202ENST00000538485 USH2AO75445 5202 aa8.39□□□□□ -1.07
EFCAB11-202ENST00000538485 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
EFCAB11-202ENST00000538485 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
EFCAB11-202ENST00000538485 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
EFCAB11-202ENST00000538485 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
EFCAB11-202ENST00000538485 SSPOA2VEC9 5147 aa8.15□□□□□ -1.11
EFCAB11-202ENST00000538485 MT1XP80297 61 aa8.11□□□□□ -1.11
EFCAB11-202ENST00000538485 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
EFCAB11-202ENST00000538485 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
EFCAB11-202ENST00000538485 ROMO1P60602 79 aa8.08□□□□□ -1.12
EFCAB11-202ENST00000538485 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
EFCAB11-202ENST00000538485 PRO2289Q9P1D8 64 aa8□□□□□ -1.13
EFCAB11-202ENST00000538485 KRTAP19-6Q3LI70 58 aa7.96□□□□□ -1.13
EFCAB11-202ENST00000538485 KTN1-AS1Q86SY8 53 aa7.86□□□□□ -1.15
EFCAB11-202ENST00000538485 TNP1P09430 55 aa7.85□□□□□ -1.15
EFCAB11-202ENST00000538485 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
EFCAB11-202ENST00000538485 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
EFCAB11-202ENST00000538485 KRTAP10-7P60409 375 aaPredicted RBP7.79□□□□□ -1.16
EFCAB11-202ENST00000538485 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
EFCAB11-202ENST00000538485 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
EFCAB11-202ENST00000538485 KMT2DO14686 5537 aa7.68□□□□□ -1.18
EFCAB11-202ENST00000538485 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
EFCAB11-202ENST00000538485 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
EFCAB11-202ENST00000538485 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
EFCAB11-202ENST00000538485 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
EFCAB11-202ENST00000538485 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
EFCAB11-202ENST00000538485 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
EFCAB11-202ENST00000538485 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
EFCAB11-202ENST00000538485 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
EFCAB11-202ENST00000538485 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
EFCAB11-202ENST00000538485 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.23
EFCAB11-202ENST00000538485 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
EFCAB11-202ENST00000538485 KRTAP19-5Q3LI72 72 aa7.3□□□□□ -1.24
EFCAB11-202ENST00000538485 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
EFCAB11-202ENST00000538485 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
EFCAB11-202ENST00000538485 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-202ENST00000538485 MUC12Q9UKN1 5478 aa7.12□□□□□ -1.27
EFCAB11-202ENST00000538485 MT1EP04732 61 aa7.11□□□□□ -1.27
EFCAB11-202ENST00000538485 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
EFCAB11-202ENST00000538485 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
EFCAB11-202ENST00000538485 KRTAP5-9P26371 169 aa7.04□□□□□ -1.28
EFCAB11-202ENST00000538485 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
EFCAB11-202ENST00000538485 MT1LQ93083 61 aa6.95□□□□□ -1.3
EFCAB11-202ENST00000538485 MDN1Q9NU22 5596 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms