RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 FAM236BA0A1B0GV22 79 aa10.66□□□□□ -0.7
CLTA-209ENST00000538225 H3BPC8 53 aa10.62□□□□□ -0.71
CLTA-209ENST00000538225 SSPOA2VEC9 5147 aa10.59□□□□□ -0.71
CLTA-209ENST00000538225 A8MUN3 132 aa10.59□□□□□ -0.71
CLTA-209ENST00000538225 KRTAP19-1Q8IUB9 90 aa10.56□□□□□ -0.72
CLTA-209ENST00000538225 NDUFC1O43677 76 aa10.54□□□□□ -0.72
CLTA-209ENST00000538225 KRTAP9-7A8MTY7 169 aa10.48□□□□□ -0.73
CLTA-209ENST00000538225 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
CLTA-209ENST00000538225 SMIM20Q8N5G0 67 aa10.47□□□□□ -0.73
CLTA-209ENST00000538225 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.43□□□□□ -0.74
CLTA-209ENST00000538225 KRTAP19-6Q3LI70 58 aa10.39□□□□□ -0.75
CLTA-209ENST00000538225 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
CLTA-209ENST00000538225 SPRR2GQ9BYE4 73 aa10.37□□□□□ -0.75
CLTA-209ENST00000538225 FCGBPQ9Y6R7 5405 aaPredicted RBP10.35□□□□□ -0.75
CLTA-209ENST00000538225 H0YAA0 97 aa10.33□□□□□ -0.76
CLTA-209ENST00000538225 ADM2Q7Z4H4 148 aa10.3□□□□□ -0.76
CLTA-209ENST00000538225 CRIPTQ9P021 101 aa10.29□□□□□ -0.76
CLTA-209ENST00000538225 Q5VV11 94 aa10.27□□□□□ -0.77
CLTA-209ENST00000538225 SNURFQ9Y675 71 aa10.27□□□□□ -0.77
CLTA-209ENST00000538225 KRTAP19-8Q3LI54 63 aa10.26□□□□□ -0.77
CLTA-209ENST00000538225 MT1BP07438 61 aa10.25□□□□□ -0.77
CLTA-209ENST00000538225 ACYP2P14621 99 aa10.21□□□□□ -0.77
CLTA-209ENST00000538225 SERP2Q8N6R1 65 aa10.21□□□□□ -0.77
CLTA-209ENST00000538225 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
CLTA-209ENST00000538225 P0C880 135 aa10.09□□□□□ -0.79
CLTA-209ENST00000538225 A6NN06 94 aa10.05□□□□□ -0.8
CLTA-209ENST00000538225 CHKB-CPT1BH3BT56 60 aa10.04□□□□□ -0.8
CLTA-209ENST00000538225 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
CLTA-209ENST00000538225 MACF1Q9UPN3 7388 aaKnown RBP10.03□□□□□ -0.8
CLTA-209ENST00000538225 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
CLTA-209ENST00000538225 R4GN34 69 aa10□□□□□ -0.81
CLTA-209ENST00000538225 COX7CP15954 63 aa9.96□□□□□ -0.82
CLTA-209ENST00000538225 KRTAP10-5P60370 271 aa9.96□□□□□ -0.82
CLTA-209ENST00000538225 M0QZ58 72 aa9.94□□□□□ -0.82
CLTA-209ENST00000538225 SYNE2Q8WXH0 6885 aaKnown RBP9.92□□□□□ -0.82
CLTA-209ENST00000538225 PLAC4Q8WY50 150 aa9.83□□□□□ -0.84
CLTA-209ENST00000538225 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
CLTA-209ENST00000538225 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
CLTA-209ENST00000538225 COA5Q86WW8 74 aa9.78□□□□□ -0.84
CLTA-209ENST00000538225 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
CLTA-209ENST00000538225 H7BZZ5 65 aa9.75□□□□□ -0.85
CLTA-209ENST00000538225 KRTAP6-3Q3LI67 103 aa9.72□□□□□ -0.85
CLTA-209ENST00000538225 PRO2289Q9P1D8 64 aa9.69□□□□□ -0.86
CLTA-209ENST00000538225 MT1XP80297 61 aa9.68□□□□□ -0.86
CLTA-209ENST00000538225 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
CLTA-209ENST00000538225 SEC61GP60059 68 aa9.52□□□□□ -0.89
CLTA-209ENST00000538225 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
CLTA-209ENST00000538225 SERP1Q9Y6X1 66 aa9.5□□□□□ -0.89
CLTA-209ENST00000538225 KRTAP5-9P26371 169 aa9.36□□□□□ -0.91
CLTA-209ENST00000538225 KRTAP12-2P59991 146 aa9.35□□□□□ -0.91
CLTA-209ENST00000538225 A0A1B0GU33 70 aa9.34□□□□□ -0.91
CLTA-209ENST00000538225 NEBP20929 6669 aa9.33□□□□□ -0.92
CLTA-209ENST00000538225 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
CLTA-209ENST00000538225 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
CLTA-209ENST00000538225 A0A0D9SG42 100 aa9.3□□□□□ -0.92
CLTA-209ENST00000538225 A0A1B0GU69 56 aa9.28□□□□□ -0.92
CLTA-209ENST00000538225 KMT2DO14686 5537 aa9.27□□□□□ -0.92
CLTA-209ENST00000538225 KRTAP10-7P60409 375 aaPredicted RBP9.26□□□□□ -0.93
CLTA-209ENST00000538225 CAMK2N1Q7Z7J9 78 aa9.25□□□□□ -0.93
CLTA-209ENST00000538225 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
CLTA-209ENST00000538225 MUC12Q9UKN1 5478 aa9.21□□□□□ -0.93
CLTA-209ENST00000538225 KRTAP4-8A0A0G2JLE6 195 aa9.21□□□□□ -0.94
CLTA-209ENST00000538225 KRTAP4-8Q9BYQ9 185 aa9.21□□□□□ -0.94
CLTA-209ENST00000538225 SPRR2FQ96RM1 72 aa9.19□□□□□ -0.94
CLTA-209ENST00000538225 KRTAP10-12P60413 245 aa9.18□□□□□ -0.94
CLTA-209ENST00000538225 TMEM258P61165 79 aa9.18□□□□□ -0.94
CLTA-209ENST00000538225 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CLTA-209ENST00000538225 KRTAP20-1Q3LI63 56 aa9.1□□□□□ -0.95
CLTA-209ENST00000538225 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
CLTA-209ENST00000538225 SMIM26A0A096LP01 95 aa9.06□□□□□ -0.96
CLTA-209ENST00000538225 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
CLTA-209ENST00000538225 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
CLTA-209ENST00000538225 A8MU10 97 aa9.02□□□□□ -0.97
CLTA-209ENST00000538225 SPRR2EP22531 72 aa9□□□□□ -0.97
CLTA-209ENST00000538225 SPRR2BP35325 72 aa9□□□□□ -0.97
CLTA-209ENST00000538225 SPRR2AP35326 72 aa9□□□□□ -0.97
CLTA-209ENST00000538225 MDN1Q9NU22 5596 aa9□□□□□ -0.97
CLTA-209ENST00000538225 LCE1AQ5T7P2 110 aa8.9□□□□□ -0.98
CLTA-209ENST00000538225 UQCR11O14957 56 aa8.77□□□□□ -1.01
CLTA-209ENST00000538225 KRTAP2-3P0C7H8 128 aa8.73□□□□□ -1.01
CLTA-209ENST00000538225 KRTAP2-4Q9BYR9 128 aa8.73□□□□□ -1.01
CLTA-209ENST00000538225 SPRR2DP22532 72 aa8.69□□□□□ -1.02
CLTA-209ENST00000538225 C10orf95Q9H7T3 257 aa8.67□□□□□ -1.02
CLTA-209ENST00000538225 KRTAP19-7Q3SYF9 63 aa8.64□□□□□ -1.03
CLTA-209ENST00000538225 V9GYY9 64 aa8.64□□□□□ -1.03
CLTA-209ENST00000538225 PSPHP1O15172 72 aa8.61□□□□□ -1.03
CLTA-209ENST00000538225 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
CLTA-209ENST00000538225 Q1T7F1 81 aa8.6□□□□□ -1.03
CLTA-209ENST00000538225 TNP1P09430 55 aa8.58□□□□□ -1.04
CLTA-209ENST00000538225 MT1EP04732 61 aa8.56□□□□□ -1.04
CLTA-209ENST00000538225 PCP4P48539 62 aa8.53□□□□□ -1.04
CLTA-209ENST00000538225 KRTAP19-5Q3LI72 72 aa8.52□□□□□ -1.05
CLTA-209ENST00000538225 KRTAP2-2Q9BYT5 123 aa8.46□□□□□ -1.06
CLTA-209ENST00000538225 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
CLTA-209ENST00000538225 LCE3AQ5TA76 89 aa8.45□□□□□ -1.06
CLTA-209ENST00000538225 LCE3BQ5TA77 95 aa8.44□□□□□ -1.06
CLTA-209ENST00000538225 KRTAP19-3Q7Z4W3 81 aa8.43□□□□□ -1.06
CLTA-209ENST00000538225 LCE5AQ5TCM9 118 aa8.41□□□□□ -1.06
CLTA-209ENST00000538225 K7ERS5 55 aa8.39□□□□□ -1.07
CLTA-209ENST00000538225 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms