RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HYDINQ4G0P3 5121 aa2.5□□□□□ -2.01
PTPRD-213ENST00000537002 HUWE1Q7Z6Z7 4374 aaKnown RBP2.5□□□□□ -2.01
PTPRD-213ENST00000537002 ZNF469Q96JG9 3925 aaPredicted RBP2.5□□□□□ -2.01
PTPRD-213ENST00000537002 DNAH10Q8IVF4 4471 aa2.5□□□□□ -2.01
PTPRD-213ENST00000537002 DNAH8Q96JB1 4490 aa2.5□□□□□ -2.01
PTPRD-213ENST00000537002 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
PTPRD-213ENST00000537002 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
PTPRD-213ENST00000537002 KRTAP4-5Q9BYR2 181 aa2.48□□□□□ -2.01
PTPRD-213ENST00000537002 HECTD4Q9Y4D8 3996 aa2.48□□□□□ -2.01
PTPRD-213ENST00000537002 VPS13DQ5THJ4 4388 aa2.48□□□□□ -2.01
PTPRD-213ENST00000537002 MT1HL1P0DM35 61 aa2.48□□□□□ -2.01
PTPRD-213ENST00000537002 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
PTPRD-213ENST00000537002 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
PTPRD-213ENST00000537002 KRTAP10-4P60372 401 aaPredicted RBP2.45□□□□□ -2.02
PTPRD-213ENST00000537002 RYR2Q92736 4967 aa2.44□□□□□ -2.02
PTPRD-213ENST00000537002 ANK2Q01484 3957 aa2.43□□□□□ -2.02
PTPRD-213ENST00000537002 HERC1Q15751 4861 aa2.43□□□□□ -2.02
PTPRD-213ENST00000537002 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
PTPRD-213ENST00000537002 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
PTPRD-213ENST00000537002 LYSTQ99698 3801 aa2.41□□□□□ -2.02
PTPRD-213ENST00000537002 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.03
PTPRD-213ENST00000537002 SACSQ9NZJ4 4579 aa2.39□□□□□ -2.03
PTPRD-213ENST00000537002 CMYA5Q8N3K9 4069 aa2.38□□□□□ -2.03
PTPRD-213ENST00000537002 HERC2O95714 4834 aa2.38□□□□□ -2.03
PTPRD-213ENST00000537002 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
PTPRD-213ENST00000537002 DNAH7Q8WXX0 4024 aa2.36□□□□□ -2.03
PTPRD-213ENST00000537002 KIAA1109Q2LD37 5005 aa2.35□□□□□ -2.03
PTPRD-213ENST00000537002 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
PTPRD-213ENST00000537002 LRP1BQ9NZR2 4599 aa2.35□□□□□ -2.03
PTPRD-213ENST00000537002 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
PTPRD-213ENST00000537002 RYR3Q15413 4870 aa2.32□□□□□ -2.04
PTPRD-213ENST00000537002 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
PTPRD-213ENST00000537002 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
PTPRD-213ENST00000537002 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
PTPRD-213ENST00000537002 STARD9Q9P2P6 4700 aa2.3□□□□□ -2.04
PTPRD-213ENST00000537002 KMT2CQ8NEZ4 4911 aaKnown RBP2.29□□□□□ -2.04
PTPRD-213ENST00000537002 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
PTPRD-213ENST00000537002 KRTAP17-1Q9BYP8 105 aa2.28□□□□□ -2.04
PTPRD-213ENST00000537002 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
PTPRD-213ENST00000537002 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
PTPRD-213ENST00000537002 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.05
PTPRD-213ENST00000537002 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
PTPRD-213ENST00000537002 KRTAP10-12P60413 245 aa2.26□□□□□ -2.05
PTPRD-213ENST00000537002 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
PTPRD-213ENST00000537002 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
PTPRD-213ENST00000537002 KRTAP19-4Q3LI73 84 aa2.23□□□□□ -2.05
PTPRD-213ENST00000537002 LRP1Q07954 4544 aaKnown RBP2.23□□□□□ -2.05
PTPRD-213ENST00000537002 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
PTPRD-213ENST00000537002 EPPK1P58107 5090 aaKnown RBP2.22□□□□□ -2.05
PTPRD-213ENST00000537002 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
PTPRD-213ENST00000537002 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
PTPRD-213ENST00000537002 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
PTPRD-213ENST00000537002 FAT1Q14517 4588 aa2.18□□□□□ -2.06
PTPRD-213ENST00000537002 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
PTPRD-213ENST00000537002 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
PTPRD-213ENST00000537002 PKD1P98161 4303 aa2.17□□□□□ -2.06
PTPRD-213ENST00000537002 TNXBP22105 4242 aa2.16□□□□□ -2.06
PTPRD-213ENST00000537002 FAT2Q9NYQ8 4349 aa2.16□□□□□ -2.06
PTPRD-213ENST00000537002 MYCBP2O75592 4640 aa2.15□□□□□ -2.06
PTPRD-213ENST00000537002 MT1HP80294 61 aa2.14□□□□□ -2.07
PTPRD-213ENST00000537002 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
PTPRD-213ENST00000537002 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
PTPRD-213ENST00000537002 HSPG2P98160 4391 aa2.12□□□□□ -2.07
PTPRD-213ENST00000537002 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
PTPRD-213ENST00000537002 RNF213Q63HN8 5207 aa2.11□□□□□ -2.07
PTPRD-213ENST00000537002 MT2AP02795 61 aa2.06□□□□□ -2.08
PTPRD-213ENST00000537002 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
PTPRD-213ENST00000537002 FAT4Q6V0I7 4981 aa2.04□□□□□ -2.08
PTPRD-213ENST00000537002 FLGP20930 4061 aaPredicted RBP2.04□□□□□ -2.08
PTPRD-213ENST00000537002 KRTAP19-8Q3LI54 63 aa2.04□□□□□ -2.08
PTPRD-213ENST00000537002 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
PTPRD-213ENST00000537002 LCE2DQ5TA82 110 aaPredicted RBP2.03□□□□□ -2.08
PTPRD-213ENST00000537002 KRTAP9-2Q9BYQ4 174 aa2.02□□□□□ -2.09
PTPRD-213ENST00000537002 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
PTPRD-213ENST00000537002 LCE3CQ5T5A8 94 aa2.02□□□□□ -2.09
PTPRD-213ENST00000537002 KRTAP19-1Q8IUB9 90 aa2.02□□□□□ -2.09
PTPRD-213ENST00000537002 MUC17Q685J3 4493 aa2□□□□□ -2.09
PTPRD-213ENST00000537002 MT1FP04733 61 aa1.99□□□□□ -2.09
PTPRD-213ENST00000537002 LRP2P98164 4655 aa1.97□□□□□ -2.09
PTPRD-213ENST00000537002 KRTAP10-7P60409 375 aaPredicted RBP1.96□□□□□ -2.1
PTPRD-213ENST00000537002 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
PTPRD-213ENST00000537002 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
PTPRD-213ENST00000537002 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
PTPRD-213ENST00000537002 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
PTPRD-213ENST00000537002 LCE2CQ5TA81 110 aa1.94□□□□□ -2.1
PTPRD-213ENST00000537002 MT1XP80297 61 aa1.92□□□□□ -2.1
PTPRD-213ENST00000537002 USH2AO75445 5202 aa1.91□□□□□ -2.1
PTPRD-213ENST00000537002 SSPOA2VEC9 5147 aa1.9□□□□□ -2.1
PTPRD-213ENST00000537002 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
PTPRD-213ENST00000537002 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
PTPRD-213ENST00000537002 KRTAP9-8Q9BYQ0 159 aa1.89□□□□□ -2.11
PTPRD-213ENST00000537002 KRTAP9-3Q9BYQ3 159 aa1.88□□□□□ -2.11
PTPRD-213ENST00000537002 MT1BP07438 61 aa1.87□□□□□ -2.11
PTPRD-213ENST00000537002 SPRR2EP22531 72 aa1.86□□□□□ -2.11
PTPRD-213ENST00000537002 SPRR2BP35325 72 aa1.86□□□□□ -2.11
PTPRD-213ENST00000537002 SPRR2AP35326 72 aa1.86□□□□□ -2.11
PTPRD-213ENST00000537002 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
PTPRD-213ENST00000537002 LCE3BQ5TA77 95 aa1.84□□□□□ -2.11
PTPRD-213ENST00000537002 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
PTPRD-213ENST00000537002 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms