RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 SERP2Q8N6R1 65 aa9.9□□□□□ -0.83
LPCAT3-204ENST00000536797 KRTAP9-3Q9BYQ3 159 aa9.9□□□□□ -0.83
LPCAT3-204ENST00000536797 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
LPCAT3-204ENST00000536797 CSAG1Q6PB30 78 aa9.88□□□□□ -0.83
LPCAT3-204ENST00000536797 USH2AO75445 5202 aa9.86□□□□□ -0.83
LPCAT3-204ENST00000536797 COX7CP15954 63 aa9.82□□□□□ -0.84
LPCAT3-204ENST00000536797 A8MUN3 132 aa9.81□□□□□ -0.84
LPCAT3-204ENST00000536797 LCE2BO14633 110 aa9.78□□□□□ -0.84
LPCAT3-204ENST00000536797 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
LPCAT3-204ENST00000536797 PCP4P48539 62 aa9.74□□□□□ -0.85
LPCAT3-204ENST00000536797 C20orf197Q8N268 126 aa9.71□□□□□ -0.86
LPCAT3-204ENST00000536797 NDUFC1O43677 76 aa9.7□□□□□ -0.86
LPCAT3-204ENST00000536797 SSPOA2VEC9 5147 aa9.7□□□□□ -0.86
LPCAT3-204ENST00000536797 CCDC179H3BU77 68 aa9.66□□□□□ -0.86
LPCAT3-204ENST00000536797 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
LPCAT3-204ENST00000536797 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
LPCAT3-204ENST00000536797 H0YAA0 97 aa9.52□□□□□ -0.89
LPCAT3-204ENST00000536797 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
LPCAT3-204ENST00000536797 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
LPCAT3-204ENST00000536797 H7BZZ5 65 aa9.47□□□□□ -0.89
LPCAT3-204ENST00000536797 ACYP2P14621 99 aa9.47□□□□□ -0.89
LPCAT3-204ENST00000536797 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
LPCAT3-204ENST00000536797 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
LPCAT3-204ENST00000536797 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
LPCAT3-204ENST00000536797 FCGBPQ9Y6R7 5405 aaPredicted RBP9.42□□□□□ -0.9
LPCAT3-204ENST00000536797 KRTAP19-6Q3LI70 58 aa9.4□□□□□ -0.9
LPCAT3-204ENST00000536797 TMEM258P61165 79 aa9.39□□□□□ -0.91
LPCAT3-204ENST00000536797 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
LPCAT3-204ENST00000536797 ATP5EP56381 51 aaPredicted RBP9.35□□□□□ -0.91
LPCAT3-204ENST00000536797 Q5VV11 94 aa9.35□□□□□ -0.91
LPCAT3-204ENST00000536797 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
LPCAT3-204ENST00000536797 CHKB-CPT1BH3BT56 60 aa9.31□□□□□ -0.92
LPCAT3-204ENST00000536797 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
LPCAT3-204ENST00000536797 MT1BP07438 61 aa9.3□□□□□ -0.92
LPCAT3-204ENST00000536797 P0C880 135 aa9.23□□□□□ -0.93
LPCAT3-204ENST00000536797 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
LPCAT3-204ENST00000536797 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
LPCAT3-204ENST00000536797 R4GN34 69 aa9.19□□□□□ -0.94
LPCAT3-204ENST00000536797 MACF1Q9UPN3 7388 aaKnown RBP9.14□□□□□ -0.95
LPCAT3-204ENST00000536797 A6NN06 94 aa9.12□□□□□ -0.95
LPCAT3-204ENST00000536797 M0QZ58 72 aa9.12□□□□□ -0.95
LPCAT3-204ENST00000536797 COA5Q86WW8 74 aa9.09□□□□□ -0.95
LPCAT3-204ENST00000536797 SERP1Q9Y6X1 66 aa9.09□□□□□ -0.95
LPCAT3-204ENST00000536797 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
LPCAT3-204ENST00000536797 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
LPCAT3-204ENST00000536797 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
LPCAT3-204ENST00000536797 SYNE2Q8WXH0 6885 aaKnown RBP8.99□□□□□ -0.97
LPCAT3-204ENST00000536797 RPS28P62857 69 aaKnown RBP8.97□□□□□ -0.97
LPCAT3-204ENST00000536797 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
LPCAT3-204ENST00000536797 SEC61GP60059 68 aa8.86□□□□□ -0.99
LPCAT3-204ENST00000536797 PRO2289Q9P1D8 64 aa8.86□□□□□ -0.99
LPCAT3-204ENST00000536797 SMIM26A0A096LP01 95 aa8.82□□□□□ -1
LPCAT3-204ENST00000536797 MT1XP80297 61 aa8.8□□□□□ -1
LPCAT3-204ENST00000536797 KRTAP13-4Q3LI77 160 aa8.74□□□□□ -1.01
LPCAT3-204ENST00000536797 KRTAP6-3Q3LI67 103 aa8.73□□□□□ -1.01
LPCAT3-204ENST00000536797 V9GYY9 64 aa8.73□□□□□ -1.01
LPCAT3-204ENST00000536797 Q1T7F1 81 aa8.67□□□□□ -1.02
LPCAT3-204ENST00000536797 LINC01558Q9Y6Z2 57 aa8.67□□□□□ -1.02
LPCAT3-204ENST00000536797 A0A1B0GU33 70 aa8.64□□□□□ -1.03
LPCAT3-204ENST00000536797 A0A1B0GU69 56 aa8.63□□□□□ -1.03
LPCAT3-204ENST00000536797 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
LPCAT3-204ENST00000536797 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
LPCAT3-204ENST00000536797 KMT2DO14686 5537 aa8.56□□□□□ -1.04
LPCAT3-204ENST00000536797 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
LPCAT3-204ENST00000536797 A0A0D9SG42 100 aa8.54□□□□□ -1.04
LPCAT3-204ENST00000536797 PSPHP1O15172 72 aa8.51□□□□□ -1.05
LPCAT3-204ENST00000536797 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
LPCAT3-204ENST00000536797 MUC12Q9UKN1 5478 aa8.5□□□□□ -1.05
LPCAT3-204ENST00000536797 KRTAP5-9P26371 169 aa8.46□□□□□ -1.06
LPCAT3-204ENST00000536797 KRTAP10-7P60409 375 aaPredicted RBP8.41□□□□□ -1.06
LPCAT3-204ENST00000536797 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
LPCAT3-204ENST00000536797 NEBP20929 6669 aa8.41□□□□□ -1.06
LPCAT3-204ENST00000536797 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
LPCAT3-204ENST00000536797 KRTAP10-12P60413 245 aa8.37□□□□□ -1.07
LPCAT3-204ENST00000536797 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
LPCAT3-204ENST00000536797 UQCR11O14957 56 aa8.34□□□□□ -1.07
LPCAT3-204ENST00000536797 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
LPCAT3-204ENST00000536797 A8MU10 97 aa8.31□□□□□ -1.08
LPCAT3-204ENST00000536797 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
LPCAT3-204ENST00000536797 A6NED7 52 aa8.3□□□□□ -1.08
LPCAT3-204ENST00000536797 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
LPCAT3-204ENST00000536797 MDN1Q9NU22 5596 aa8.29□□□□□ -1.08
LPCAT3-204ENST00000536797 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
LPCAT3-204ENST00000536797 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
LPCAT3-204ENST00000536797 SPRR2EP22531 72 aa8.11□□□□□ -1.11
LPCAT3-204ENST00000536797 SPRR2BP35325 72 aa8.11□□□□□ -1.11
LPCAT3-204ENST00000536797 SPRR2AP35326 72 aa8.11□□□□□ -1.11
LPCAT3-204ENST00000536797 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
LPCAT3-204ENST00000536797 LCE1AQ5T7P2 110 aa8.02□□□□□ -1.13
LPCAT3-204ENST00000536797 K7ERS5 55 aa7.96□□□□□ -1.13
LPCAT3-204ENST00000536797 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.13
LPCAT3-204ENST00000536797 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
LPCAT3-204ENST00000536797 TNP1P09430 55 aa7.91□□□□□ -1.14
LPCAT3-204ENST00000536797 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
LPCAT3-204ENST00000536797 SPRR2DP22532 72 aa7.84□□□□□ -1.15
LPCAT3-204ENST00000536797 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
LPCAT3-204ENST00000536797 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
LPCAT3-204ENST00000536797 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
LPCAT3-204ENST00000536797 MT1EP04732 61 aa7.78□□□□□ -1.16
LPCAT3-204ENST00000536797 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms