RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
CHPF-203ENST00000535926 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
CHPF-203ENST00000535926 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
CHPF-203ENST00000535926 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.87
CHPF-203ENST00000535926 XP32Q5T750 250 aa9.57□□□□□ -0.88
CHPF-203ENST00000535926 Q5VSD8 79 aa9.56□□□□□ -0.88
CHPF-203ENST00000535926 KRTAP25-1Q3LHN0 102 aa9.53□□□□□ -0.88
CHPF-203ENST00000535926 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.88
CHPF-203ENST00000535926 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
CHPF-203ENST00000535926 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
CHPF-203ENST00000535926 RYR1P21817 5038 aa9.51□□□□□ -0.89
CHPF-203ENST00000535926 RYR3Q15413 4870 aa9.48□□□□□ -0.89
CHPF-203ENST00000535926 K7ERS5 55 aa9.48□□□□□ -0.89
CHPF-203ENST00000535926 CRIPTQ9P021 101 aa9.47□□□□□ -0.89
CHPF-203ENST00000535926 LPAP08519 4548 aa9.47□□□□□ -0.89
CHPF-203ENST00000535926 S4R3F8 94 aa9.46□□□□□ -0.89
CHPF-203ENST00000535926 A0A0D9SG42 100 aa9.42□□□□□ -0.9
CHPF-203ENST00000535926 P0C880 135 aa9.39□□□□□ -0.91
CHPF-203ENST00000535926 KIAA1109Q2LD37 5005 aa9.38□□□□□ -0.91
CHPF-203ENST00000535926 MT1HL1P0DM35 61 aa9.37□□□□□ -0.91
CHPF-203ENST00000535926 ROMO1P60602 79 aa9.35□□□□□ -0.91
CHPF-203ENST00000535926 LRP2P98164 4655 aa9.34□□□□□ -0.91
CHPF-203ENST00000535926 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
CHPF-203ENST00000535926 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CHPF-203ENST00000535926 ABCA13Q86UQ4 5058 aa9.14□□□□□ -0.95
CHPF-203ENST00000535926 EPPK1P58107 5090 aaKnown RBP9.13□□□□□ -0.95
CHPF-203ENST00000535926 C10orf95Q9H7T3 257 aa9.11□□□□□ -0.95
CHPF-203ENST00000535926 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
CHPF-203ENST00000535926 SPINT4Q6UDR6 99 aa9.08□□□□□ -0.96
CHPF-203ENST00000535926 H3BS24 57 aa9□□□□□ -0.97
CHPF-203ENST00000535926 M0QZ58 72 aa9□□□□□ -0.97
CHPF-203ENST00000535926 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
CHPF-203ENST00000535926 MUC17Q685J3 4493 aa8.9□□□□□ -0.98
CHPF-203ENST00000535926 KRTAP4-1Q9BYQ7 146 aa8.8□□□□□ -1
CHPF-203ENST00000535926 R4GN34 69 aa8.8□□□□□ -1
CHPF-203ENST00000535926 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
CHPF-203ENST00000535926 SEC61BP60468 96 aaKnown RBP8.75□□□□□ -1.01
CHPF-203ENST00000535926 KRTAP15-1Q3LI76 137 aa8.74□□□□□ -1.01
CHPF-203ENST00000535926 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
CHPF-203ENST00000535926 HERC2O95714 4834 aa8.64□□□□□ -1.03
CHPF-203ENST00000535926 MUC2Q02817 5179 aa8.62□□□□□ -1.03
CHPF-203ENST00000535926 J3QL48 77 aa8.56□□□□□ -1.04
CHPF-203ENST00000535926 NDUFAF8A1L188 74 aa8.54□□□□□ -1.04
CHPF-203ENST00000535926 FLGP20930 4061 aaPredicted RBP8.45□□□□□ -1.06
CHPF-203ENST00000535926 BIRC6Q9NR09 4857 aa8.38□□□□□ -1.07
CHPF-203ENST00000535926 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
CHPF-203ENST00000535926 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
CHPF-203ENST00000535926 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
CHPF-203ENST00000535926 HERC1Q15751 4861 aa8.28□□□□□ -1.08
CHPF-203ENST00000535926 PP632Q6XCG6 107 aa8.19□□□□□ -1.1
CHPF-203ENST00000535926 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
CHPF-203ENST00000535926 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
CHPF-203ENST00000535926 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
CHPF-203ENST00000535926 TNP1P09430 55 aa8.03□□□□□ -1.12
CHPF-203ENST00000535926 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
CHPF-203ENST00000535926 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
CHPF-203ENST00000535926 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
CHPF-203ENST00000535926 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
CHPF-203ENST00000535926 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
CHPF-203ENST00000535926 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
CHPF-203ENST00000535926 M0R2T5 61 aa7.83□□□□□ -1.16
CHPF-203ENST00000535926 MT1HP80294 61 aa7.82□□□□□ -1.16
CHPF-203ENST00000535926 MT1FP04733 61 aa7.75□□□□□ -1.17
CHPF-203ENST00000535926 SPRR5A0A1B0GTR4 108 aa7.74□□□□□ -1.17
CHPF-203ENST00000535926 MT2AP02795 61 aa7.72□□□□□ -1.17
CHPF-203ENST00000535926 KRTAP10-10P60014 251 aa7.7□□□□□ -1.18
CHPF-203ENST00000535926 KRTAP9-8Q9BYQ0 159 aa7.68□□□□□ -1.18
CHPF-203ENST00000535926 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
CHPF-203ENST00000535926 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
CHPF-203ENST00000535926 A0A0A0MQY5 61 aa7.54□□□□□ -1.2
CHPF-203ENST00000535926 MT1BP07438 61 aa7.5□□□□□ -1.21
CHPF-203ENST00000535926 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
CHPF-203ENST00000535926 MT1XP80297 61 aa7.47□□□□□ -1.21
CHPF-203ENST00000535926 KRTAP8-1Q8IUC2 63 aa7.45□□□□□ -1.22
CHPF-203ENST00000535926 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
CHPF-203ENST00000535926 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
CHPF-203ENST00000535926 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
CHPF-203ENST00000535926 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
CHPF-203ENST00000535926 USH2AO75445 5202 aa7.09□□□□□ -1.27
CHPF-203ENST00000535926 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
CHPF-203ENST00000535926 LCE2BO14633 110 aa7.06□□□□□ -1.28
CHPF-203ENST00000535926 KMT2DO14686 5537 aa7.02□□□□□ -1.29
CHPF-203ENST00000535926 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
CHPF-203ENST00000535926 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
CHPF-203ENST00000535926 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
CHPF-203ENST00000535926 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
CHPF-203ENST00000535926 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
CHPF-203ENST00000535926 INE1O15225 51 aa6.78□□□□□ -1.32
CHPF-203ENST00000535926 KRTAP9-6A8MVA2 160 aa6.69□□□□□ -1.34
CHPF-203ENST00000535926 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
CHPF-203ENST00000535926 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
CHPF-203ENST00000535926 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
CHPF-203ENST00000535926 MT1LQ93083 61 aa6.46□□□□□ -1.38
CHPF-203ENST00000535926 MT1EP04732 61 aa6.44□□□□□ -1.38
CHPF-203ENST00000535926 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
CHPF-203ENST00000535926 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
CHPF-203ENST00000535926 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
CHPF-203ENST00000535926 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CHPF-203ENST00000535926 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
CHPF-203ENST00000535926 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms