RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 VPS13DQ5THJ4 4388 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 CELSR1Q9NYQ6 3014 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 F8P00451 2351 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 KRTAP21-3Q3LHN1 58 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 ABCA12Q86UK0 2595 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 HRNRQ86YZ3 2850 aaPredicted RBP1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 ABCA2Q9BZC7 2435 aa1.24□□□□□ -2.21
ATPAF1-211ENST00000534216 A0A0D9SG42 100 aa1.23□□□□□ -2.21
ATPAF1-211ENST00000534216 HECTD1Q9ULT8 2610 aa1.23□□□□□ -2.21
ATPAF1-211ENST00000534216 DCHS2Q6V1P9 2916 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 APCP25054 2843 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 CRYBG3Q68DQ2 2970 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 ZNF469Q96JG9 3925 aaPredicted RBP1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 FLNCQ14315 2725 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 Q5VSD8 79 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 ITPR3Q14573 2671 aa1.22□□□□□ -2.21
ATPAF1-211ENST00000534216 SONP18583 2426 aaKnown RBP1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 PCLOQ9Y6V0 5065 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 A0A096LNI7 61 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 CUBNO60494 3623 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 FLNAP21333 2647 aaKnown RBP1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 ANK3Q12955 4377 aaKnown RBP1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 UTP20O75691 2785 aaKnown RBP1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 TENM4Q6N022 2769 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 TACC2O95359 2948 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 PDZD2O15018 2839 aa1.21□□□□□ -2.22
ATPAF1-211ENST00000534216 CENPEQ02224 2701 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 MYO9AB2RTY4 2548 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 MTORP42345 2549 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 FLNBO75369 2602 aaKnown RBP1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 SETD2Q9BYW2 2564 aaPredicted RBP1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 ACANP16112 2415 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 DMBT1Q9UGM3 2413 aaPredicted RBP1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 TLN2Q9Y4G6 2542 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 TEX15Q9BXT5 2789 aa1.19□□□□□ -2.22
ATPAF1-211ENST00000534216 KIAA1109Q2LD37 5005 aa1.18□□□□□ -2.22
ATPAF1-211ENST00000534216 GCN1Q92616 2671 aaKnown RBP1.18□□□□□ -2.22
ATPAF1-211ENST00000534216 HIVEP1P15822 2718 aa1.18□□□□□ -2.22
ATPAF1-211ENST00000534216 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
ATPAF1-211ENST00000534216 TRRAPQ9Y4A5 3859 aa1.18□□□□□ -2.22
ATPAF1-211ENST00000534216 ANK2Q01484 3957 aa1.17□□□□□ -2.22
ATPAF1-211ENST00000534216 MAP1AP78559 2803 aaPredicted RBP1.17□□□□□ -2.22
ATPAF1-211ENST00000534216 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
ATPAF1-211ENST00000534216 ZANQ9Y493 2812 aa1.16□□□□□ -2.22
ATPAF1-211ENST00000534216 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
ATPAF1-211ENST00000534216 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
ATPAF1-211ENST00000534216 ITPR2Q14571 2701 aa1.16□□□□□ -2.22
ATPAF1-211ENST00000534216 MUC2Q02817 5179 aa1.16□□□□□ -2.22
ATPAF1-211ENST00000534216 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
ATPAF1-211ENST00000534216 MAST4O15021 2626 aa1.15□□□□□ -2.23
ATPAF1-211ENST00000534216 ATRQ13535 2644 aa1.15□□□□□ -2.23
ATPAF1-211ENST00000534216 NSD1Q96L73 2696 aaPredicted RBP1.15□□□□□ -2.23
ATPAF1-211ENST00000534216 SETXQ7Z333 2677 aaKnown RBP1.14□□□□□ -2.23
ATPAF1-211ENST00000534216 DNAH11Q96DT5 4516 aa1.14□□□□□ -2.23
ATPAF1-211ENST00000534216 SMR3BP02814 79 aaPredicted RBP1.14□□□□□ -2.23
ATPAF1-211ENST00000534216 NIPBLQ6KC79 2804 aaeCLIP1.14□□□□□ -2.23
ATPAF1-211ENST00000534216 TEP1Q99973 2627 aaKnown RBP1.14□□□□□ -2.23
ATPAF1-211ENST00000534216 NF1P21359 2839 aa1.13□□□□□ -2.23
ATPAF1-211ENST00000534216 DNAH3Q8TD57 4116 aa1.13□□□□□ -2.23
ATPAF1-211ENST00000534216 NBEAL2Q6ZNJ1 2754 aa1.12□□□□□ -2.23
ATPAF1-211ENST00000534216 M0QZ58 72 aa1.12□□□□□ -2.23
ATPAF1-211ENST00000534216 CMYA5Q8N3K9 4069 aa1.12□□□□□ -2.23
ATPAF1-211ENST00000534216 MGAM2Q2M2H8 2515 aa1.11□□□□□ -2.23
ATPAF1-211ENST00000534216 RPS29P62273 56 aaKnown RBP1.11□□□□□ -2.23
ATPAF1-211ENST00000534216 STAB1Q9NY15 2570 aa1.11□□□□□ -2.23
ATPAF1-211ENST00000534216 HUWE1Q7Z6Z7 4374 aaKnown RBP1.1□□□□□ -2.23
ATPAF1-211ENST00000534216 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
ATPAF1-211ENST00000534216 NOTCH1P46531 2555 aa1.09□□□□□ -2.23
ATPAF1-211ENST00000534216 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.24
ATPAF1-211ENST00000534216 C9orf92A6NGG3 77 aa1.08□□□□□ -2.24
ATPAF1-211ENST00000534216 COL7A1Q02388 2944 aa1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 DNAH8Q96JB1 4490 aa1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 LYSTQ99698 3801 aa1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 FRAS1Q86XX4 4008 aa1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 DNAH7Q8WXX0 4024 aa1.07□□□□□ -2.24
ATPAF1-211ENST00000534216 MYCBP2O75592 4640 aa1.06□□□□□ -2.24
ATPAF1-211ENST00000534216 DYNC2H1Q8NCM8 4307 aaKnown RBP1.06□□□□□ -2.24
ATPAF1-211ENST00000534216 DNAH9Q9NYC9 4486 aa1.06□□□□□ -2.24
ATPAF1-211ENST00000534216 KMT2AQ03164 3969 aa1.05□□□□□ -2.24
ATPAF1-211ENST00000534216 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
ATPAF1-211ENST00000534216 DNAH1Q9P2D7 4330 aa1.05□□□□□ -2.24
ATPAF1-211ENST00000534216 PRKDCP78527 4128 aaKnown RBP1.04□□□□□ -2.24
ATPAF1-211ENST00000534216 NBEAL1Q6ZS30 2694 aa1.04□□□□□ -2.24
ATPAF1-211ENST00000534216 DNHD1Q96M86 4753 aa1.04□□□□□ -2.24
ATPAF1-211ENST00000534216 SACSQ9NZJ4 4579 aa1.04□□□□□ -2.24
ATPAF1-211ENST00000534216 STAB2Q8WWQ8 2551 aa1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 TENM3Q9P273 2699 aa1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 PKD1L1Q8TDX9 2849 aa1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 PLECQ15149 4684 aaKnown RBP1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 STARD9Q9P2P6 4700 aa1.03□□□□□ -2.24
ATPAF1-211ENST00000534216 VPS13BQ7Z7G8 4022 aa1.02□□□□□ -2.25
ATPAF1-211ENST00000534216 DNAH6Q9C0G6 4158 aa1.02□□□□□ -2.25
ATPAF1-211ENST00000534216 NEBP20929 6669 aa1.02□□□□□ -2.25
ATPAF1-211ENST00000534216 DNAH10Q8IVF4 4471 aa1.01□□□□□ -2.25
ATPAF1-211ENST00000534216 KRTAP10-4P60372 401 aaPredicted RBP1.01□□□□□ -2.25
ATPAF1-211ENST00000534216 TGP01266 2768 aa1.01□□□□□ -2.25
ATPAF1-211ENST00000534216 DNAH2Q9P225 4427 aa1□□□□□ -2.25
ATPAF1-211ENST00000534216 FSIP2Q5CZC0 6907 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms