RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 MT1FP04733 61 aa8.1□□□□□ -1.11
PKP3-209ENST00000533069 PCP4P48539 62 aa8.1□□□□□ -1.11
PKP3-209ENST00000533069 A8MUN3 132 aa8.09□□□□□ -1.11
PKP3-209ENST00000533069 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
PKP3-209ENST00000533069 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
PKP3-209ENST00000533069 H7BZZ5 65 aa8.06□□□□□ -1.12
PKP3-209ENST00000533069 USH2AO75445 5202 aa8.05□□□□□ -1.12
PKP3-209ENST00000533069 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
PKP3-209ENST00000533069 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
PKP3-209ENST00000533069 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
PKP3-209ENST00000533069 DMAC1Q96GE9 116 aa8□□□□□ -1.13
PKP3-209ENST00000533069 TMEM258P61165 79 aa7.99□□□□□ -1.13
PKP3-209ENST00000533069 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
PKP3-209ENST00000533069 SSPOA2VEC9 5147 aa7.97□□□□□ -1.13
PKP3-209ENST00000533069 ACYP2P14621 99 aa7.96□□□□□ -1.14
PKP3-209ENST00000533069 LCE2BO14633 110 aa7.95□□□□□ -1.14
PKP3-209ENST00000533069 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
PKP3-209ENST00000533069 S4R3F8 94 aa7.85□□□□□ -1.15
PKP3-209ENST00000533069 KRTAP19-1Q8IUB9 90 aa7.82□□□□□ -1.16
PKP3-209ENST00000533069 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
PKP3-209ENST00000533069 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
PKP3-209ENST00000533069 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
PKP3-209ENST00000533069 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.78□□□□□ -1.16
PKP3-209ENST00000533069 COA5Q86WW8 74 aa7.77□□□□□ -1.17
PKP3-209ENST00000533069 LCA10Q71F78 164 aa7.76□□□□□ -1.17
PKP3-209ENST00000533069 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
PKP3-209ENST00000533069 SERP1Q9Y6X1 66 aa7.72□□□□□ -1.17
PKP3-209ENST00000533069 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
PKP3-209ENST00000533069 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
PKP3-209ENST00000533069 KRTAP9-7A8MTY7 169 aa7.67□□□□□ -1.18
PKP3-209ENST00000533069 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
PKP3-209ENST00000533069 H0YAA0 97 aa7.6□□□□□ -1.19
PKP3-209ENST00000533069 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
PKP3-209ENST00000533069 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
PKP3-209ENST00000533069 SEC61GP60059 68 aa7.51□□□□□ -1.21
PKP3-209ENST00000533069 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
PKP3-209ENST00000533069 V9GYY9 64 aa7.49□□□□□ -1.21
PKP3-209ENST00000533069 Q5VV11 94 aa7.48□□□□□ -1.21
PKP3-209ENST00000533069 KRTAP19-8Q3LI54 63 aa7.47□□□□□ -1.21
PKP3-209ENST00000533069 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
PKP3-209ENST00000533069 MT1BP07438 61 aa7.44□□□□□ -1.22
PKP3-209ENST00000533069 PRR15LQ9BU68 103 aa7.44□□□□□ -1.22
PKP3-209ENST00000533069 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
PKP3-209ENST00000533069 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
PKP3-209ENST00000533069 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
PKP3-209ENST00000533069 A0A1B0GU69 56 aa7.41□□□□□ -1.22
PKP3-209ENST00000533069 Q1T7F1 81 aa7.4□□□□□ -1.22
PKP3-209ENST00000533069 A6NN06 94 aa7.37□□□□□ -1.23
PKP3-209ENST00000533069 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
PKP3-209ENST00000533069 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
PKP3-209ENST00000533069 P0C880 135 aa7.29□□□□□ -1.24
PKP3-209ENST00000533069 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
PKP3-209ENST00000533069 M0QZ58 72 aa7.26□□□□□ -1.25
PKP3-209ENST00000533069 A0A1B0GU33 70 aa7.25□□□□□ -1.25
PKP3-209ENST00000533069 R4GN34 69 aa7.25□□□□□ -1.25
PKP3-209ENST00000533069 PSPHP1O15172 72 aa7.18□□□□□ -1.26
PKP3-209ENST00000533069 UQCR11O14957 56 aa7.17□□□□□ -1.26
PKP3-209ENST00000533069 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
PKP3-209ENST00000533069 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
PKP3-209ENST00000533069 A6NED7 52 aa7.04□□□□□ -1.28
PKP3-209ENST00000533069 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
PKP3-209ENST00000533069 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
PKP3-209ENST00000533069 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
PKP3-209ENST00000533069 NEBP20929 6669 aa7.03□□□□□ -1.28
PKP3-209ENST00000533069 LINC01554Q52M75 96 aa7□□□□□ -1.29
PKP3-209ENST00000533069 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
PKP3-209ENST00000533069 MT1XP80297 61 aa6.99□□□□□ -1.29
PKP3-209ENST00000533069 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
PKP3-209ENST00000533069 A0A0D9SG42 100 aa6.92□□□□□ -1.3
PKP3-209ENST00000533069 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
PKP3-209ENST00000533069 KMT2DO14686 5537 aa6.9□□□□□ -1.31
PKP3-209ENST00000533069 A8MU10 97 aa6.87□□□□□ -1.31
PKP3-209ENST00000533069 K7ERS5 55 aa6.87□□□□□ -1.31
PKP3-209ENST00000533069 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
PKP3-209ENST00000533069 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
PKP3-209ENST00000533069 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
PKP3-209ENST00000533069 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
PKP3-209ENST00000533069 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
PKP3-209ENST00000533069 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
PKP3-209ENST00000533069 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
PKP3-209ENST00000533069 KRTAP20-1Q3LI63 56 aa6.74□□□□□ -1.33
PKP3-209ENST00000533069 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
PKP3-209ENST00000533069 SPRR2EP22531 72 aa6.66□□□□□ -1.34
PKP3-209ENST00000533069 SPRR2BP35325 72 aa6.66□□□□□ -1.34
PKP3-209ENST00000533069 SPRR2AP35326 72 aa6.66□□□□□ -1.34
PKP3-209ENST00000533069 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
PKP3-209ENST00000533069 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
PKP3-209ENST00000533069 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
PKP3-209ENST00000533069 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
PKP3-209ENST00000533069 KRTAP2-3P0C7H8 128 aa6.58□□□□□ -1.36
PKP3-209ENST00000533069 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
PKP3-209ENST00000533069 KRTAP2-4Q9BYR9 128 aa6.58□□□□□ -1.36
PKP3-209ENST00000533069 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
PKP3-209ENST00000533069 SPRR2DP22532 72 aa6.45□□□□□ -1.38
PKP3-209ENST00000533069 ROMO1P60602 79 aa6.44□□□□□ -1.38
PKP3-209ENST00000533069 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
PKP3-209ENST00000533069 TNP1P09430 55 aa6.41□□□□□ -1.38
PKP3-209ENST00000533069 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
PKP3-209ENST00000533069 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
PKP3-209ENST00000533069 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms