RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, human

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHID1-222	ENST00000533059	USH2A	O75445	5202 aa		6.47	□□□□□ -1.37
CHID1-222	ENST00000533059		A8MUN3	132 aa		6.46	□□□□□ -1.38
CHID1-222	ENST00000533059	KLKP1	Q107X0	134 aa		6.46	□□□□□ -1.38
CHID1-222	ENST00000533059	LCE2B	O14633	110 aa		6.45	□□□□□ -1.38
CHID1-222	ENST00000533059	NDUFC1	O43677	76 aa		6.42	□□□□□ -1.38
CHID1-222	ENST00000533059	SMIM20	Q8N5G0	67 aa		6.42	□□□□□ -1.38
CHID1-222	ENST00000533059	SSPO	A2VEC9	5147 aa		6.42	□□□□□ -1.38
CHID1-222	ENST00000533059	KRTAP3-3	Q9BYR6	98 aa		6.39	□□□□□ -1.39
CHID1-222	ENST00000533059	TRAV7	A0A075B6U4	112 aa		6.37	□□□□□ -1.39
CHID1-222	ENST00000533059	KRTAP19-1	Q8IUB9	90 aa		6.31	□□□□□ -1.4
CHID1-222	ENST00000533059	DMAC1	Q96GE9	116 aa		6.3	□□□□□ -1.4
CHID1-222	ENST00000533059		H0YAA0	97 aa		6.25	□□□□□ -1.41
CHID1-222	ENST00000533059	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.24	□□□□□ -1.41
CHID1-222	ENST00000533059	ADM2	Q7Z4H4	148 aa		6.24	□□□□□ -1.41
CHID1-222	ENST00000533059	CRIPT	Q9P021	101 aa		6.24	□□□□□ -1.41
CHID1-222	ENST00000533059	SNURF	Q9Y675	71 aa		6.24	□□□□□ -1.41
CHID1-222	ENST00000533059	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.24	□□□□□ -1.41
CHID1-222	ENST00000533059	ACYP2	P14621	99 aa		6.23	□□□□□ -1.41
CHID1-222	ENST00000533059		Q5VV11	94 aa		6.23	□□□□□ -1.41
CHID1-222	ENST00000533059	KRTAP19-6	Q3LI70	58 aa		6.22	□□□□□ -1.41
CHID1-222	ENST00000533059	SPRR2G	Q9BYE4	73 aa		6.22	□□□□□ -1.41
CHID1-222	ENST00000533059	C20orf197	Q8N268	126 aa		6.21	□□□□□ -1.42
CHID1-222	ENST00000533059	SERP2	Q8N6R1	65 aa		6.21	□□□□□ -1.42
CHID1-222	ENST00000533059	CHKB-CPT1B	H3BT56	60 aa		6.19	□□□□□ -1.42
CHID1-222	ENST00000533059	SPTSSB	Q8NFR3	76 aa		6.18	□□□□□ -1.42
CHID1-222	ENST00000533059	KRTAP3-2	Q9BYR7	98 aa		6.16	□□□□□ -1.42
CHID1-222	ENST00000533059	ANAPC13	Q9BS18	74 aa		6.15	□□□□□ -1.42
CHID1-222	ENST00000533059	KRTAP19-8	Q3LI54	63 aa		6.14	□□□□□ -1.43
CHID1-222	ENST00000533059	KRTAP9-7	A8MTY7	169 aa		6.13	□□□□□ -1.43
CHID1-222	ENST00000533059	SPANXA2-OT1	Q8N9U9	137 aa		6.12	□□□□□ -1.43
CHID1-222	ENST00000533059	MT1B	P07438	61 aa		6.11	□□□□□ -1.43
CHID1-222	ENST00000533059		R4GN34	69 aa		6.1	□□□□□ -1.43
CHID1-222	ENST00000533059		A6NN06	94 aa		6.09	□□□□□ -1.43
CHID1-222	ENST00000533059	COX7C	P15954	63 aa		6.08	□□□□□ -1.44
CHID1-222	ENST00000533059		P0C880	135 aa		6.07	□□□□□ -1.44
CHID1-222	ENST00000533059		M0QZ58	72 aa		6.05	□□□□□ -1.44
CHID1-222	ENST00000533059	MACF1	Q9UPN3	7388 aa	Known RBP	6.02	□□□□□ -1.45
CHID1-222	ENST00000533059	LINC01554	Q52M75	96 aa		5.98	□□□□□ -1.45
CHID1-222	ENST00000533059	PLAC4	Q8WY50	150 aa		5.98	□□□□□ -1.45
CHID1-222	ENST00000533059	KRTAP10-5	P60370	271 aa		5.97	□□□□□ -1.45
CHID1-222	ENST00000533059	COA5	Q86WW8	74 aa		5.96	□□□□□ -1.46
CHID1-222	ENST00000533059	SYNE2	Q8WXH0	6885 aa	Known RBP	5.94	□□□□□ -1.46
CHID1-222	ENST00000533059	CCDC179	H3BU77	68 aa		5.91	□□□□□ -1.46
CHID1-222	ENST00000533059		H7BZZ5	65 aa		5.91	□□□□□ -1.46
CHID1-222	ENST00000533059	PRO2289	Q9P1D8	64 aa		5.91	□□□□□ -1.46
CHID1-222	ENST00000533059	RPS28	P62857	69 aa	Known RBP	5.9	□□□□□ -1.46
CHID1-222	ENST00000533059	CYSTM1	Q9H1C7	97 aa		5.89	□□□□□ -1.47
CHID1-222	ENST00000533059	SEC61G	P60059	68 aa		5.88	□□□□□ -1.47
CHID1-222	ENST00000533059	SERP1	Q9Y6X1	66 aa		5.85	□□□□□ -1.47
CHID1-222	ENST00000533059	TMEM258	P61165	79 aa		5.81	□□□□□ -1.48
CHID1-222	ENST00000533059	KRTAP6-3	Q3LI67	103 aa		5.81	□□□□□ -1.48
CHID1-222	ENST00000533059	MT1X	P80297	61 aa		5.78	□□□□□ -1.48
CHID1-222	ENST00000533059	ATP5E	P56381	51 aa	Predicted RBP	5.75	□□□□□ -1.49
CHID1-222	ENST00000533059	KRTAP13-4	Q3LI77	160 aa		5.71	□□□□□ -1.5
CHID1-222	ENST00000533059		A0A1B0GU69	56 aa		5.7	□□□□□ -1.5
CHID1-222	ENST00000533059		A0A1B0GU33	70 aa		5.68	□□□□□ -1.5
CHID1-222	ENST00000533059		A0A0D9SG42	100 aa		5.66	□□□□□ -1.5
CHID1-222	ENST00000533059	CAMK2N1	Q7Z7J9	78 aa		5.66	□□□□□ -1.5
CHID1-222	ENST00000533059	SPATA8	Q6RVD6	105 aa		5.64	□□□□□ -1.51
CHID1-222	ENST00000533059	KRTAP12-2	P59991	146 aa		5.62	□□□□□ -1.51
CHID1-222	ENST00000533059	PRO0628	Q9UI54	55 aa		5.62	□□□□□ -1.51
CHID1-222	ENST00000533059	PRR15L	Q9BU68	103 aa		5.61	□□□□□ -1.51
CHID1-222	ENST00000533059	SPINT4	Q6UDR6	99 aa		5.59	□□□□□ -1.51
CHID1-222	ENST00000533059	MUC12	Q9UKN1	5478 aa		5.58	□□□□□ -1.52
CHID1-222	ENST00000533059	SMIM26	A0A096LP01	95 aa		5.58	□□□□□ -1.52
CHID1-222	ENST00000533059	KRTAP5-9	P26371	169 aa		5.58	□□□□□ -1.52
CHID1-222	ENST00000533059	KRTAP8-1	Q8IUC2	63 aa		5.58	□□□□□ -1.52
CHID1-222	ENST00000533059	NEB	P20929	6669 aa		5.58	□□□□□ -1.52
CHID1-222	ENST00000533059	KMT2D	O14686	5537 aa		5.57	□□□□□ -1.52
CHID1-222	ENST00000533059	KRTAP10-7	P60409	375 aa	Predicted RBP	5.54	□□□□□ -1.52
CHID1-222	ENST00000533059	SPRR2F	Q96RM1	72 aa		5.54	□□□□□ -1.52
CHID1-222	ENST00000533059	LINC01558	Q9Y6Z2	57 aa		5.5	□□□□□ -1.53
CHID1-222	ENST00000533059	KRTAP10-12	P60413	245 aa		5.49	□□□□□ -1.53
CHID1-222	ENST00000533059	KRTAP4-8	A0A0G2JLE6	195 aa		5.48	□□□□□ -1.53
CHID1-222	ENST00000533059	KRTAP4-8	Q9BYQ9	185 aa		5.48	□□□□□ -1.53
CHID1-222	ENST00000533059	KRTAP12-1	P59990	96 aa		5.47	□□□□□ -1.53
CHID1-222	ENST00000533059		A8MU10	97 aa		5.46	□□□□□ -1.54
CHID1-222	ENST00000533059		V9GYY9	64 aa		5.46	□□□□□ -1.54
CHID1-222	ENST00000533059	MDN1	Q9NU22	5596 aa		5.45	□□□□□ -1.54
CHID1-222	ENST00000533059	SPRR2E	P22531	72 aa		5.43	□□□□□ -1.54
CHID1-222	ENST00000533059	SPRR2B	P35325	72 aa		5.43	□□□□□ -1.54
CHID1-222	ENST00000533059	SPRR2A	P35326	72 aa		5.43	□□□□□ -1.54
CHID1-222	ENST00000533059	UQCR11	O14957	56 aa		5.38	□□□□□ -1.55
CHID1-222	ENST00000533059	BRK1	Q8WUW1	75 aa		5.38	□□□□□ -1.55
CHID1-222	ENST00000533059	KRTAP20-1	Q3LI63	56 aa		5.36	□□□□□ -1.55
CHID1-222	ENST00000533059		Q1T7F1	81 aa		5.3	□□□□□ -1.56
CHID1-222	ENST00000533059	LCE1A	Q5T7P2	110 aa		5.3	□□□□□ -1.56
CHID1-222	ENST00000533059	MIR22HG	Q0VDD5	57 aa		5.28	□□□□□ -1.56
CHID1-222	ENST00000533059	PMAIP1	Q13794	54 aa		5.28	□□□□□ -1.56
CHID1-222	ENST00000533059	PSPHP1	O15172	72 aa		5.26	□□□□□ -1.57
CHID1-222	ENST00000533059	SPRR2D	P22532	72 aa		5.25	□□□□□ -1.57
CHID1-222	ENST00000533059	TNP1	P09430	55 aa		5.24	□□□□□ -1.57
CHID1-222	ENST00000533059		K7ERS5	55 aa		5.22	□□□□□ -1.57
CHID1-222	ENST00000533059	KRTAP2-3	P0C7H8	128 aa		5.22	□□□□□ -1.57
CHID1-222	ENST00000533059	KRTAP2-4	Q9BYR9	128 aa		5.22	□□□□□ -1.57
CHID1-222	ENST00000533059	C10orf95	Q9H7T3	257 aa		5.19	□□□□□ -1.58
CHID1-222	ENST00000533059	KRTAP19-7	Q3SYF9	63 aa		5.15	□□□□□ -1.59
CHID1-222	ENST00000533059		A6NED7	52 aa		5.13	□□□□□ -1.59
CHID1-222	ENST00000533059	MT1E	P04732	61 aa		5.13	□□□□□ -1.59
CHID1-222	ENST00000533059	KTN1-AS1	Q86SY8	53 aa		5.12	□□□□□ -1.59

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