RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-222ENST00000533059 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
CHID1-222ENST00000533059 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
CHID1-222ENST00000533059 ABCC9O60706 1549 aa29.06■■■□□ 2.24
CHID1-222ENST00000533059 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
CHID1-222ENST00000533059 RB1CC1Q8TDY2 1594 aa27.97■■■□□ 2.07
CHID1-222ENST00000533059 NACADO15069 1562 aa27.9■■■□□ 2.06
CHID1-222ENST00000533059 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
CHID1-222ENST00000533059 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
CHID1-222ENST00000533059 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
CHID1-222ENST00000533059 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
CHID1-222ENST00000533059 PABPN1Q86U42 306 aaKnown RBP eCLIP27.14■■□□□ 1.94
CHID1-222ENST00000533059 SCRIBQ14160 1630 aa27.14■■□□□ 1.94
CHID1-222ENST00000533059 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
CHID1-222ENST00000533059 DNAJC5BQ9UF47 199 aa26.84■■□□□ 1.89
CHID1-222ENST00000533059 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
CHID1-222ENST00000533059 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
CHID1-222ENST00000533059 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
CHID1-222ENST00000533059 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
CHID1-222ENST00000533059 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
CHID1-222ENST00000533059 SMARCA4P51532 1647 aa25.91■■□□□ 1.74
CHID1-222ENST00000533059 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
CHID1-222ENST00000533059 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
CHID1-222ENST00000533059 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
CHID1-222ENST00000533059 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
CHID1-222ENST00000533059 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
CHID1-222ENST00000533059 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
CHID1-222ENST00000533059 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
CHID1-222ENST00000533059 WIZO95785 1651 aa25.45■■□□□ 1.67
CHID1-222ENST00000533059 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
CHID1-222ENST00000533059 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
CHID1-222ENST00000533059 NESP48681 1621 aa25.13■■□□□ 1.61
CHID1-222ENST00000533059 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
CHID1-222ENST00000533059 LAMC3Q9Y6N6 1575 aa25.09■■□□□ 1.61
CHID1-222ENST00000533059 CADPSQ9ULU8 1353 aa24.99■■□□□ 1.59
CHID1-222ENST00000533059 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
CHID1-222ENST00000533059 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
CHID1-222ENST00000533059 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
CHID1-222ENST00000533059 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
CHID1-222ENST00000533059 CFTRP13569 1480 aa24.83■■□□□ 1.56
CHID1-222ENST00000533059 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
CHID1-222ENST00000533059 CUX2O14529 1486 aa24.78■■□□□ 1.56
CHID1-222ENST00000533059 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
CHID1-222ENST00000533059 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
CHID1-222ENST00000533059 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
CHID1-222ENST00000533059 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
CHID1-222ENST00000533059 WDR62O43379 1518 aa24.56■■□□□ 1.52
CHID1-222ENST00000533059 URB2Q14146 1524 aaKnown RBP24.45■■□□□ 1.5
CHID1-222ENST00000533059 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
CHID1-222ENST00000533059 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
CHID1-222ENST00000533059 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
CHID1-222ENST00000533059 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
CHID1-222ENST00000533059 DNAJC5Q9H3Z4 198 aa24.14■■□□□ 1.45
CHID1-222ENST00000533059 CUX1P39880 1505 aa24.13■■□□□ 1.45
CHID1-222ENST00000533059 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CHID1-222ENST00000533059 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
CHID1-222ENST00000533059 SOGA1O94964 1423 aa24.04■■□□□ 1.44
CHID1-222ENST00000533059 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
CHID1-222ENST00000533059 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
CHID1-222ENST00000533059 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
CHID1-222ENST00000533059 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
CHID1-222ENST00000533059 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
CHID1-222ENST00000533059 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
CHID1-222ENST00000533059 BIVM-ERCC5R4GMW8 1640 aa23.94■■□□□ 1.42
CHID1-222ENST00000533059 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
CHID1-222ENST00000533059 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■■■■■ 33.3
CHID1-222ENST00000533059 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
CHID1-222ENST00000533059 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
CHID1-222ENST00000533059 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
CHID1-222ENST00000533059 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
CHID1-222ENST00000533059 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
CHID1-222ENST00000533059 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
CHID1-222ENST00000533059 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
CHID1-222ENST00000533059 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
CHID1-222ENST00000533059 FBLN2P98095 1184 aa23.73■■□□□ 1.39
CHID1-222ENST00000533059 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
CHID1-222ENST00000533059 CHD1O14646 1710 aa23.71■■□□□ 1.39
CHID1-222ENST00000533059 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
CHID1-222ENST00000533059 CHMP7Q8WUX9 453 aaPredicted RBP23.64■■□□□ 1.37
CHID1-222ENST00000533059 SYNJ2O15056 1496 aa23.6■■□□□ 1.37
CHID1-222ENST00000533059 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
CHID1-222ENST00000533059 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
CHID1-222ENST00000533059 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
CHID1-222ENST00000533059 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
CHID1-222ENST00000533059 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
CHID1-222ENST00000533059 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
CHID1-222ENST00000533059 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
CHID1-222ENST00000533059 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
CHID1-222ENST00000533059 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
CHID1-222ENST00000533059 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
CHID1-222ENST00000533059 CUL7Q14999 1698 aa23.38■■□□□ 1.33
CHID1-222ENST00000533059 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CHID1-222ENST00000533059 IGF1RP08069 1367 aa23.35■■□□□ 1.33
CHID1-222ENST00000533059 CEP170Q5SW79 1584 aa23.31■■□□□ 1.32
CHID1-222ENST00000533059 NUP160Q12769 1436 aa23.31■■□□□ 1.32
CHID1-222ENST00000533059 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
CHID1-222ENST00000533059 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
CHID1-222ENST00000533059 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
CHID1-222ENST00000533059 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
CHID1-222ENST00000533059 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
CHID1-222ENST00000533059 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms