RNA–Protein interactions for RNA: ENST00000532671.1

MRPL49-207, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-207ENST00000532671 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
MRPL49-207ENST00000532671 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
MRPL49-207ENST00000532671 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
MRPL49-207ENST00000532671 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
MRPL49-207ENST00000532671 DYNC1H1Q14204 4646 aaKnown RBP6.4□□□□□ -1.38
MRPL49-207ENST00000532671 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
MRPL49-207ENST00000532671 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
MRPL49-207ENST00000532671 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
MRPL49-207ENST00000532671 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
MRPL49-207ENST00000532671 APOBP04114 4563 aaKnown RBP6.31□□□□□ -1.4
MRPL49-207ENST00000532671 FAT1Q14517 4588 aa6.3□□□□□ -1.4
MRPL49-207ENST00000532671 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
MRPL49-207ENST00000532671 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
MRPL49-207ENST00000532671 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
MRPL49-207ENST00000532671 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
MRPL49-207ENST00000532671 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
MRPL49-207ENST00000532671 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
MRPL49-207ENST00000532671 S4R3F8 94 aa6.26□□□□□ -1.41
MRPL49-207ENST00000532671 HSPG2P98160 4391 aa6.23□□□□□ -1.41
MRPL49-207ENST00000532671 RYR1P21817 5038 aa6.2□□□□□ -1.42
MRPL49-207ENST00000532671 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
MRPL49-207ENST00000532671 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
MRPL49-207ENST00000532671 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
MRPL49-207ENST00000532671 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
MRPL49-207ENST00000532671 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
MRPL49-207ENST00000532671 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
MRPL49-207ENST00000532671 LRP1Q07954 4544 aaKnown RBP6.11□□□□□ -1.43
MRPL49-207ENST00000532671 XP32Q5T750 250 aa6.08□□□□□ -1.44
MRPL49-207ENST00000532671 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
MRPL49-207ENST00000532671 TNXBP22105 4242 aa6.02□□□□□ -1.45
MRPL49-207ENST00000532671 HERC2O95714 4834 aa6.02□□□□□ -1.45
MRPL49-207ENST00000532671 LPAP08519 4548 aa6.01□□□□□ -1.45
MRPL49-207ENST00000532671 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
MRPL49-207ENST00000532671 Q5VSD8 79 aa5.97□□□□□ -1.45
MRPL49-207ENST00000532671 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
MRPL49-207ENST00000532671 M0QZ58 72 aa5.91□□□□□ -1.46
MRPL49-207ENST00000532671 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
MRPL49-207ENST00000532671 LRP2P98164 4655 aa5.84□□□□□ -1.47
MRPL49-207ENST00000532671 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
MRPL49-207ENST00000532671 HERC1Q15751 4861 aa5.83□□□□□ -1.48
MRPL49-207ENST00000532671 R4GN34 69 aa5.8□□□□□ -1.48
MRPL49-207ENST00000532671 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
MRPL49-207ENST00000532671 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
MRPL49-207ENST00000532671 MT1HL1P0DM35 61 aa5.71□□□□□ -1.5
MRPL49-207ENST00000532671 J3QL48 77 aa5.64□□□□□ -1.51
MRPL49-207ENST00000532671 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
MRPL49-207ENST00000532671 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
MRPL49-207ENST00000532671 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
MRPL49-207ENST00000532671 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
MRPL49-207ENST00000532671 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
MRPL49-207ENST00000532671 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
MRPL49-207ENST00000532671 MUC2Q02817 5179 aa5.49□□□□□ -1.53
MRPL49-207ENST00000532671 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
MRPL49-207ENST00000532671 SEC61BP60468 96 aaKnown RBP5.36□□□□□ -1.55
MRPL49-207ENST00000532671 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
MRPL49-207ENST00000532671 TNP1P09430 55 aa5.34□□□□□ -1.56
MRPL49-207ENST00000532671 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
MRPL49-207ENST00000532671 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
MRPL49-207ENST00000532671 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
MRPL49-207ENST00000532671 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
MRPL49-207ENST00000532671 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
MRPL49-207ENST00000532671 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
MRPL49-207ENST00000532671 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
MRPL49-207ENST00000532671 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.61
MRPL49-207ENST00000532671 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
MRPL49-207ENST00000532671 INE1O15225 51 aa4.9□□□□□ -1.63
MRPL49-207ENST00000532671 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
MRPL49-207ENST00000532671 M0R2T5 61 aa4.85□□□□□ -1.63
MRPL49-207ENST00000532671 MT1HP80294 61 aa4.83□□□□□ -1.64
MRPL49-207ENST00000532671 MT1FP04733 61 aa4.81□□□□□ -1.64
MRPL49-207ENST00000532671 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
MRPL49-207ENST00000532671 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
MRPL49-207ENST00000532671 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
MRPL49-207ENST00000532671 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
MRPL49-207ENST00000532671 MT2AP02795 61 aa4.76□□□□□ -1.65
MRPL49-207ENST00000532671 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
MRPL49-207ENST00000532671 MT1XP80297 61 aa4.75□□□□□ -1.65
MRPL49-207ENST00000532671 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
MRPL49-207ENST00000532671 MT1BP07438 61 aa4.7□□□□□ -1.66
MRPL49-207ENST00000532671 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
MRPL49-207ENST00000532671 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
MRPL49-207ENST00000532671 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
MRPL49-207ENST00000532671 USH2AO75445 5202 aa4.62□□□□□ -1.67
MRPL49-207ENST00000532671 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
MRPL49-207ENST00000532671 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
MRPL49-207ENST00000532671 KMT2DO14686 5537 aa4.52□□□□□ -1.69
MRPL49-207ENST00000532671 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
MRPL49-207ENST00000532671 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
MRPL49-207ENST00000532671 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
MRPL49-207ENST00000532671 LCE2BO14633 110 aa4.41□□□□□ -1.7
MRPL49-207ENST00000532671 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
MRPL49-207ENST00000532671 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
MRPL49-207ENST00000532671 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
MRPL49-207ENST00000532671 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
MRPL49-207ENST00000532671 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.72
MRPL49-207ENST00000532671 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.72
MRPL49-207ENST00000532671 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
MRPL49-207ENST00000532671 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
MRPL49-207ENST00000532671 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
MRPL49-207ENST00000532671 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms