RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
SSH3-209ENST00000532600 MP68P56378 58 aa8.87□□□□□ -0.99
SSH3-209ENST00000532600 KLKP1Q107X0 134 aa8.87□□□□□ -0.99
SSH3-209ENST00000532600 MACF1Q9UPN3 7388 aaKnown RBP8.81□□□□□ -1
SSH3-209ENST00000532600 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
SSH3-209ENST00000532600 H3BPC8 53 aa8.79□□□□□ -1
SSH3-209ENST00000532600 SYNE2Q8WXH0 6885 aaKnown RBP8.78□□□□□ -1
SSH3-209ENST00000532600 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
SSH3-209ENST00000532600 S4R3F8 94 aa8.73□□□□□ -1.01
SSH3-209ENST00000532600 LCA10Q71F78 164 aa8.72□□□□□ -1.01
SSH3-209ENST00000532600 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
SSH3-209ENST00000532600 SERP2Q8N6R1 65 aa8.65□□□□□ -1.02
SSH3-209ENST00000532600 A8MUN3 132 aa8.63□□□□□ -1.03
SSH3-209ENST00000532600 SNURFQ9Y675 71 aa8.63□□□□□ -1.03
SSH3-209ENST00000532600 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
SSH3-209ENST00000532600 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
SSH3-209ENST00000532600 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
SSH3-209ENST00000532600 MT1BP07438 61 aa8.57□□□□□ -1.04
SSH3-209ENST00000532600 KRTAP6-3Q3LI67 103 aa8.54□□□□□ -1.04
SSH3-209ENST00000532600 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.05
SSH3-209ENST00000532600 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
SSH3-209ENST00000532600 COX7CP15954 63 aa8.5□□□□□ -1.05
SSH3-209ENST00000532600 NDUFC1O43677 76 aa8.48□□□□□ -1.05
SSH3-209ENST00000532600 Q5VV11 94 aa8.44□□□□□ -1.06
SSH3-209ENST00000532600 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
SSH3-209ENST00000532600 A6NN06 94 aa8.41□□□□□ -1.06
SSH3-209ENST00000532600 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
SSH3-209ENST00000532600 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
SSH3-209ENST00000532600 ACYP2P14621 99 aa8.38□□□□□ -1.07
SSH3-209ENST00000532600 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
SSH3-209ENST00000532600 H0YAA0 97 aa8.34□□□□□ -1.07
SSH3-209ENST00000532600 H7BZZ5 65 aa8.32□□□□□ -1.08
SSH3-209ENST00000532600 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
SSH3-209ENST00000532600 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
SSH3-209ENST00000532600 NEBP20929 6669 aa8.27□□□□□ -1.09
SSH3-209ENST00000532600 CRIPTQ9P021 101 aa8.25□□□□□ -1.09
SSH3-209ENST00000532600 MUC12Q9UKN1 5478 aa8.24□□□□□ -1.09
SSH3-209ENST00000532600 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
SSH3-209ENST00000532600 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
SSH3-209ENST00000532600 P0C880 135 aa8.2□□□□□ -1.1
SSH3-209ENST00000532600 COA5Q86WW8 74 aa8.18□□□□□ -1.1
SSH3-209ENST00000532600 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
SSH3-209ENST00000532600 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
SSH3-209ENST00000532600 KMT2DO14686 5537 aa8.09□□□□□ -1.11
SSH3-209ENST00000532600 MDN1Q9NU22 5596 aa8.02□□□□□ -1.13
SSH3-209ENST00000532600 MT1XP80297 61 aa8□□□□□ -1.13
SSH3-209ENST00000532600 M0QZ58 72 aa7.98□□□□□ -1.13
SSH3-209ENST00000532600 R4GN34 69 aa7.98□□□□□ -1.13
SSH3-209ENST00000532600 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
SSH3-209ENST00000532600 KRTAP20-1Q3LI63 56 aa7.93□□□□□ -1.14
SSH3-209ENST00000532600 TMEM258P61165 79 aa7.91□□□□□ -1.14
SSH3-209ENST00000532600 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
SSH3-209ENST00000532600 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
SSH3-209ENST00000532600 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
SSH3-209ENST00000532600 LINC01554Q52M75 96 aa7.84□□□□□ -1.15
SSH3-209ENST00000532600 SPRR2FQ96RM1 72 aa7.82□□□□□ -1.16
SSH3-209ENST00000532600 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
SSH3-209ENST00000532600 SEC61GP60059 68 aa7.77□□□□□ -1.17
SSH3-209ENST00000532600 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
SSH3-209ENST00000532600 KRTAP8-1Q8IUC2 63 aa7.74□□□□□ -1.17
SSH3-209ENST00000532600 SPRR2EP22531 72 aa7.73□□□□□ -1.17
SSH3-209ENST00000532600 SPRR2BP35325 72 aa7.73□□□□□ -1.17
SSH3-209ENST00000532600 SPRR2AP35326 72 aa7.73□□□□□ -1.17
SSH3-209ENST00000532600 KRTAP4-8A0A0G2JLE6 195 aa7.7□□□□□ -1.18
SSH3-209ENST00000532600 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
SSH3-209ENST00000532600 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
SSH3-209ENST00000532600 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
SSH3-209ENST00000532600 A0A1B0GU69 56 aa7.69□□□□□ -1.18
SSH3-209ENST00000532600 PCP4P48539 62 aa7.69□□□□□ -1.18
SSH3-209ENST00000532600 A0A1B0GU33 70 aa7.68□□□□□ -1.18
SSH3-209ENST00000532600 LCE1AQ5T7P2 110 aa7.66□□□□□ -1.18
SSH3-209ENST00000532600 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
SSH3-209ENST00000532600 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
SSH3-209ENST00000532600 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
SSH3-209ENST00000532600 A0A0D9SG42 100 aa7.58□□□□□ -1.2
SSH3-209ENST00000532600 KRTAP10-12P60413 245 aa7.57□□□□□ -1.2
SSH3-209ENST00000532600 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
SSH3-209ENST00000532600 A8MU10 97 aa7.48□□□□□ -1.21
SSH3-209ENST00000532600 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
SSH3-209ENST00000532600 SPRR2DP22532 72 aa7.46□□□□□ -1.22
SSH3-209ENST00000532600 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
SSH3-209ENST00000532600 KRTAP2-1Q9BYU5 128 aa7.45□□□□□ -1.22
SSH3-209ENST00000532600 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
SSH3-209ENST00000532600 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
SSH3-209ENST00000532600 Q1T7F1 81 aa7.4□□□□□ -1.22
SSH3-209ENST00000532600 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
SSH3-209ENST00000532600 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
SSH3-209ENST00000532600 PSPHP1O15172 72 aa7.34□□□□□ -1.23
SSH3-209ENST00000532600 V9GYY9 64 aa7.34□□□□□ -1.23
SSH3-209ENST00000532600 UQCR11O14957 56 aa7.32□□□□□ -1.24
SSH3-209ENST00000532600 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
SSH3-209ENST00000532600 MIR22HGQ0VDD5 57 aa7.22□□□□□ -1.25
SSH3-209ENST00000532600 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
SSH3-209ENST00000532600 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
SSH3-209ENST00000532600 MT1EP04732 61 aa7.08□□□□□ -1.28
SSH3-209ENST00000532600 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
SSH3-209ENST00000532600 A6NED7 52 aa7.07□□□□□ -1.28
SSH3-209ENST00000532600 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
SSH3-209ENST00000532600 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
SSH3-209ENST00000532600 TNP1P09430 55 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms