RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
PDE4DIP-227ENST00000529945 LYSTQ99698 3801 aa5.14□□□□□ -1.59
PDE4DIP-227ENST00000529945 CMYA5Q8N3K9 4069 aa5.07□□□□□ -1.6
PDE4DIP-227ENST00000529945 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
PDE4DIP-227ENST00000529945 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
PDE4DIP-227ENST00000529945 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
PDE4DIP-227ENST00000529945 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
PDE4DIP-227ENST00000529945 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
PDE4DIP-227ENST00000529945 ANK2Q01484 3957 aa4.92□□□□□ -1.62
PDE4DIP-227ENST00000529945 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
PDE4DIP-227ENST00000529945 DNAH2Q9P225 4427 aa4.88□□□□□ -1.63
PDE4DIP-227ENST00000529945 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
PDE4DIP-227ENST00000529945 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
PDE4DIP-227ENST00000529945 KMT2AQ03164 3969 aa4.86□□□□□ -1.63
PDE4DIP-227ENST00000529945 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
PDE4DIP-227ENST00000529945 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
PDE4DIP-227ENST00000529945 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
PDE4DIP-227ENST00000529945 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
PDE4DIP-227ENST00000529945 DNAH7Q8WXX0 4024 aa4.77□□□□□ -1.65
PDE4DIP-227ENST00000529945 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
PDE4DIP-227ENST00000529945 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
PDE4DIP-227ENST00000529945 MT3P25713 68 aa4.68□□□□□ -1.66
PDE4DIP-227ENST00000529945 VPS13BQ7Z7G8 4022 aa4.66□□□□□ -1.66
PDE4DIP-227ENST00000529945 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
PDE4DIP-227ENST00000529945 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
PDE4DIP-227ENST00000529945 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
PDE4DIP-227ENST00000529945 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
PDE4DIP-227ENST00000529945 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
PDE4DIP-227ENST00000529945 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
PDE4DIP-227ENST00000529945 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
PDE4DIP-227ENST00000529945 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
PDE4DIP-227ENST00000529945 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
PDE4DIP-227ENST00000529945 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
PDE4DIP-227ENST00000529945 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
PDE4DIP-227ENST00000529945 SPRR2EP22531 72 aa4.45□□□□□ -1.7
PDE4DIP-227ENST00000529945 SPRR2BP35325 72 aa4.45□□□□□ -1.7
PDE4DIP-227ENST00000529945 SPRR2AP35326 72 aa4.45□□□□□ -1.7
PDE4DIP-227ENST00000529945 MT1GP13640 62 aa4.42□□□□□ -1.7
PDE4DIP-227ENST00000529945 DNAH11Q96DT5 4516 aa4.41□□□□□ -1.7
PDE4DIP-227ENST00000529945 MT1HP80294 61 aa4.39□□□□□ -1.71
PDE4DIP-227ENST00000529945 MT2AP02795 61 aa4.37□□□□□ -1.71
PDE4DIP-227ENST00000529945 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
PDE4DIP-227ENST00000529945 PLECQ15149 4684 aaKnown RBP4.32□□□□□ -1.72
PDE4DIP-227ENST00000529945 LCE2BO14633 110 aa4.32□□□□□ -1.72
PDE4DIP-227ENST00000529945 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
PDE4DIP-227ENST00000529945 PRM1P04553 51 aa4.31□□□□□ -1.72
PDE4DIP-227ENST00000529945 SPRR2DP22532 72 aa4.31□□□□□ -1.72
PDE4DIP-227ENST00000529945 MT1FP04733 61 aa4.31□□□□□ -1.72
PDE4DIP-227ENST00000529945 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
PDE4DIP-227ENST00000529945 DNAH5Q8TE73 4624 aa4.29□□□□□ -1.72
PDE4DIP-227ENST00000529945 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
PDE4DIP-227ENST00000529945 PRKDCP78527 4128 aaKnown RBP4.26□□□□□ -1.73
PDE4DIP-227ENST00000529945 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
PDE4DIP-227ENST00000529945 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
PDE4DIP-227ENST00000529945 FAT1Q14517 4588 aa4.16□□□□□ -1.74
PDE4DIP-227ENST00000529945 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.75
PDE4DIP-227ENST00000529945 MT1XP80297 61 aa4.11□□□□□ -1.75
PDE4DIP-227ENST00000529945 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
PDE4DIP-227ENST00000529945 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
PDE4DIP-227ENST00000529945 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
PDE4DIP-227ENST00000529945 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
PDE4DIP-227ENST00000529945 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
PDE4DIP-227ENST00000529945 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
PDE4DIP-227ENST00000529945 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
PDE4DIP-227ENST00000529945 SACSQ9NZJ4 4579 aa3.96□□□□□ -1.77
PDE4DIP-227ENST00000529945 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
PDE4DIP-227ENST00000529945 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
PDE4DIP-227ENST00000529945 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
PDE4DIP-227ENST00000529945 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
PDE4DIP-227ENST00000529945 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
PDE4DIP-227ENST00000529945 MT4P47944 62 aa3.93□□□□□ -1.78
PDE4DIP-227ENST00000529945 MT1BP07438 61 aa3.91□□□□□ -1.78
PDE4DIP-227ENST00000529945 PKD1P98161 4303 aa3.9□□□□□ -1.78
PDE4DIP-227ENST00000529945 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
PDE4DIP-227ENST00000529945 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
PDE4DIP-227ENST00000529945 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
PDE4DIP-227ENST00000529945 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
PDE4DIP-227ENST00000529945 MT1LQ93083 61 aa3.84□□□□□ -1.79
PDE4DIP-227ENST00000529945 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
PDE4DIP-227ENST00000529945 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
PDE4DIP-227ENST00000529945 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
PDE4DIP-227ENST00000529945 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
PDE4DIP-227ENST00000529945 TNXBP22105 4242 aa3.72□□□□□ -1.81
PDE4DIP-227ENST00000529945 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
PDE4DIP-227ENST00000529945 LPAP08519 4548 aa3.7□□□□□ -1.82
PDE4DIP-227ENST00000529945 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
PDE4DIP-227ENST00000529945 MT1EP04732 61 aa3.67□□□□□ -1.82
PDE4DIP-227ENST00000529945 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
PDE4DIP-227ENST00000529945 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PDE4DIP-227ENST00000529945 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
PDE4DIP-227ENST00000529945 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
PDE4DIP-227ENST00000529945 HSPG2P98160 4391 aa3.66□□□□□ -1.82
PDE4DIP-227ENST00000529945 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
PDE4DIP-227ENST00000529945 RYR1P21817 5038 aa3.62□□□□□ -1.83
PDE4DIP-227ENST00000529945 LRP2P98164 4655 aa3.62□□□□□ -1.83
PDE4DIP-227ENST00000529945 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
PDE4DIP-227ENST00000529945 MT1MQ8N339 61 aa3.56□□□□□ -1.84
PDE4DIP-227ENST00000529945 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
PDE4DIP-227ENST00000529945 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
PDE4DIP-227ENST00000529945 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 230 ms