RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
PUM1-220ENST00000529846 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
PUM1-220ENST00000529846 SNURFQ9Y675 71 aa2.86□□□□□ -1.95
PUM1-220ENST00000529846 SPANXA2-OT1Q8N9U9 137 aa2.85□□□□□ -1.95
PUM1-220ENST00000529846 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
PUM1-220ENST00000529846 IGKV2-30P06310 120 aa2.84□□□□□ -1.95
PUM1-220ENST00000529846 Q5W150 140 aa2.84□□□□□ -1.95
PUM1-220ENST00000529846 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
PUM1-220ENST00000529846 RNF213Q63HN8 5207 aa2.83□□□□□ -1.96
PUM1-220ENST00000529846 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
PUM1-220ENST00000529846 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
PUM1-220ENST00000529846 C7orf65Q6ZTY9 151 aa2.83□□□□□ -1.96
PUM1-220ENST00000529846 CYP4F30PQ9H0H9 118 aa2.81□□□□□ -1.96
PUM1-220ENST00000529846 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
PUM1-220ENST00000529846 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
PUM1-220ENST00000529846 LPAP08519 4548 aa2.79□□□□□ -1.96
PUM1-220ENST00000529846 SMIM26A0A096LP01 95 aa2.79□□□□□ -1.96
PUM1-220ENST00000529846 RBM12B-AS1Q9P1G2 102 aa2.79□□□□□ -1.96
PUM1-220ENST00000529846 MUC2Q02817 5179 aa2.78□□□□□ -1.96
PUM1-220ENST00000529846 A8MUN3 132 aa2.77□□□□□ -1.97
PUM1-220ENST00000529846 HRES1P13985 223 aa2.77□□□□□ -1.97
PUM1-220ENST00000529846 SPINK7P58062 85 aa2.76□□□□□ -1.97
PUM1-220ENST00000529846 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
PUM1-220ENST00000529846 COX6B2Q6YFQ2 88 aa2.75□□□□□ -1.97
PUM1-220ENST00000529846 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
PUM1-220ENST00000529846 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
PUM1-220ENST00000529846 ACYP2P14621 99 aa2.73□□□□□ -1.97
PUM1-220ENST00000529846 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
PUM1-220ENST00000529846 KRTAP4-1Q9BYQ7 146 aa2.73□□□□□ -1.97
PUM1-220ENST00000529846 COA5Q86WW8 74 aa2.72□□□□□ -1.97
PUM1-220ENST00000529846 MPLKIPQ8TAP9 179 aa2.72□□□□□ -1.97
PUM1-220ENST00000529846 Q1T7F1 81 aa2.71□□□□□ -1.98
PUM1-220ENST00000529846 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
PUM1-220ENST00000529846 V9GYY9 64 aa2.7□□□□□ -1.98
PUM1-220ENST00000529846 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
PUM1-220ENST00000529846 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
PUM1-220ENST00000529846 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
PUM1-220ENST00000529846 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
PUM1-220ENST00000529846 M0R2T5 61 aa2.67□□□□□ -1.98
PUM1-220ENST00000529846 KRTAP19-2Q3LHN2 52 aa2.67□□□□□ -1.98
PUM1-220ENST00000529846 MT1HP80294 61 aa2.65□□□□□ -1.99
PUM1-220ENST00000529846 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
PUM1-220ENST00000529846 S4R3F8 94 aa2.63□□□□□ -1.99
PUM1-220ENST00000529846 Q5VV11 94 aa2.62□□□□□ -1.99
PUM1-220ENST00000529846 LINC01558Q9Y6Z2 57 aa2.62□□□□□ -1.99
PUM1-220ENST00000529846 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
PUM1-220ENST00000529846 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
PUM1-220ENST00000529846 PRR15LQ9BU68 103 aa2.61□□□□□ -1.99
PUM1-220ENST00000529846 PSPHP1O15172 72 aa2.6□□□□□ -1.99
PUM1-220ENST00000529846 LCA10Q71F78 164 aa2.6□□□□□ -1.99
PUM1-220ENST00000529846 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
PUM1-220ENST00000529846 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -1.99
PUM1-220ENST00000529846 KRTAP10-6P60371 365 aaPredicted RBP2.59□□□□□ -1.99
PUM1-220ENST00000529846 A0A1B0GU69 56 aa2.58□□□□□ -2
PUM1-220ENST00000529846 SEC61GP60059 68 aa2.58□□□□□ -2
PUM1-220ENST00000529846 H0YAA0 97 aa2.55□□□□□ -2
PUM1-220ENST00000529846 A6NED7 52 aa2.54□□□□□ -2
PUM1-220ENST00000529846 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
PUM1-220ENST00000529846 CDC42SE1Q9NRR8 79 aa2.54□□□□□ -2
PUM1-220ENST00000529846 CRIPTQ9P021 101 aa2.54□□□□□ -2
PUM1-220ENST00000529846 UQCR11O14957 56 aa2.52□□□□□ -2.01
PUM1-220ENST00000529846 KRTAP10-10P60014 251 aa2.52□□□□□ -2.01
PUM1-220ENST00000529846 MT2AP02795 61 aa2.5□□□□□ -2.01
PUM1-220ENST00000529846 A0A1B0GU33 70 aa2.49□□□□□ -2.01
PUM1-220ENST00000529846 A8MU10 97 aa2.49□□□□□ -2.01
PUM1-220ENST00000529846 SPATA8Q6RVD6 105 aa2.49□□□□□ -2.01
PUM1-220ENST00000529846 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
PUM1-220ENST00000529846 A6NN06 94 aa2.47□□□□□ -2.01
PUM1-220ENST00000529846 MIR22HGQ0VDD5 57 aa2.47□□□□□ -2.01
PUM1-220ENST00000529846 PMAIP1Q13794 54 aa2.47□□□□□ -2.01
PUM1-220ENST00000529846 M0QZ58 72 aa2.46□□□□□ -2.02
PUM1-220ENST00000529846 MT1FP04733 61 aa2.46□□□□□ -2.02
PUM1-220ENST00000529846 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
PUM1-220ENST00000529846 P0C880 135 aa2.45□□□□□ -2.02
PUM1-220ENST00000529846 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
PUM1-220ENST00000529846 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
PUM1-220ENST00000529846 LCE1AQ5T7P2 110 aa2.42□□□□□ -2.02
PUM1-220ENST00000529846 R4GN34 69 aa2.42□□□□□ -2.02
PUM1-220ENST00000529846 K7ERS5 55 aa2.4□□□□□ -2.03
PUM1-220ENST00000529846 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
PUM1-220ENST00000529846 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
PUM1-220ENST00000529846 KRTAP19-8Q3LI54 63 aa2.38□□□□□ -2.03
PUM1-220ENST00000529846 USH2AO75445 5202 aa2.37□□□□□ -2.03
PUM1-220ENST00000529846 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
PUM1-220ENST00000529846 PRAC1Q96KF2 57 aa2.36□□□□□ -2.03
PUM1-220ENST00000529846 A0A0D9SG42 100 aa2.35□□□□□ -2.03
PUM1-220ENST00000529846 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
PUM1-220ENST00000529846 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
PUM1-220ENST00000529846 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
PUM1-220ENST00000529846 LINC01554Q52M75 96 aa2.33□□□□□ -2.04
PUM1-220ENST00000529846 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
PUM1-220ENST00000529846 KRTAP12-2P59991 146 aa2.32□□□□□ -2.04
PUM1-220ENST00000529846 SPINT4Q6UDR6 99 aa2.32□□□□□ -2.04
PUM1-220ENST00000529846 MT1BP07438 61 aa2.29□□□□□ -2.04
PUM1-220ENST00000529846 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
PUM1-220ENST00000529846 ROMO1P60602 79 aa2.27□□□□□ -2.05
PUM1-220ENST00000529846 CAMK2N1Q7Z7J9 78 aa2.27□□□□□ -2.05
PUM1-220ENST00000529846 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
PUM1-220ENST00000529846 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
PUM1-220ENST00000529846 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms