RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SPANXA2-OT1Q8N9U9 137 aa3.97□□□□□ -1.77
SSBP3-211ENST00000528787 SERP1Q9Y6X1 66 aa3.97□□□□□ -1.77
SSBP3-211ENST00000528787 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
SSBP3-211ENST00000528787 ACYP2P14621 99 aa3.95□□□□□ -1.78
SSBP3-211ENST00000528787 S4R3F8 94 aa3.95□□□□□ -1.78
SSBP3-211ENST00000528787 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
SSBP3-211ENST00000528787 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
SSBP3-211ENST00000528787 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
SSBP3-211ENST00000528787 LORP23490 312 aaPredicted RBP3.92□□□□□ -1.78
SSBP3-211ENST00000528787 MT1HP80294 61 aa3.92□□□□□ -1.78
SSBP3-211ENST00000528787 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
SSBP3-211ENST00000528787 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
SSBP3-211ENST00000528787 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
SSBP3-211ENST00000528787 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
SSBP3-211ENST00000528787 H3BS24 57 aa3.89□□□□□ -1.79
SSBP3-211ENST00000528787 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
SSBP3-211ENST00000528787 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
SSBP3-211ENST00000528787 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
SSBP3-211ENST00000528787 KRTAP3-1Q9BYR8 98 aa3.87□□□□□ -1.79
SSBP3-211ENST00000528787 CYSTM1Q9H1C7 97 aa3.86□□□□□ -1.79
SSBP3-211ENST00000528787 H7BZZ5 65 aa3.85□□□□□ -1.79
SSBP3-211ENST00000528787 LCA10Q71F78 164 aa3.85□□□□□ -1.79
SSBP3-211ENST00000528787 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
SSBP3-211ENST00000528787 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
SSBP3-211ENST00000528787 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
SSBP3-211ENST00000528787 H0YAA0 97 aa3.8□□□□□ -1.8
SSBP3-211ENST00000528787 COA5Q86WW8 74 aa3.77□□□□□ -1.81
SSBP3-211ENST00000528787 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
SSBP3-211ENST00000528787 KRTAP10-10P60014 251 aa3.75□□□□□ -1.81
SSBP3-211ENST00000528787 Q1T7F1 81 aa3.74□□□□□ -1.81
SSBP3-211ENST00000528787 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SSBP3-211ENST00000528787 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
SSBP3-211ENST00000528787 MT2AP02795 61 aa3.71□□□□□ -1.82
SSBP3-211ENST00000528787 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
SSBP3-211ENST00000528787 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
SSBP3-211ENST00000528787 A6NN06 94 aa3.67□□□□□ -1.82
SSBP3-211ENST00000528787 MT1FP04733 61 aa3.66□□□□□ -1.82
SSBP3-211ENST00000528787 R4GN34 69 aa3.66□□□□□ -1.82
SSBP3-211ENST00000528787 A0A1B0GU69 56 aa3.65□□□□□ -1.83
SSBP3-211ENST00000528787 M0QZ58 72 aa3.64□□□□□ -1.83
SSBP3-211ENST00000528787 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
SSBP3-211ENST00000528787 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
SSBP3-211ENST00000528787 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
SSBP3-211ENST00000528787 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SSBP3-211ENST00000528787 LINC01554Q52M75 96 aa3.6□□□□□ -1.83
SSBP3-211ENST00000528787 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
SSBP3-211ENST00000528787 Q5VV11 94 aa3.59□□□□□ -1.83
SSBP3-211ENST00000528787 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
SSBP3-211ENST00000528787 A0A1B0GU33 70 aa3.57□□□□□ -1.84
SSBP3-211ENST00000528787 P0C880 135 aa3.57□□□□□ -1.84
SSBP3-211ENST00000528787 PSPHP1O15172 72 aa3.55□□□□□ -1.84
SSBP3-211ENST00000528787 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
SSBP3-211ENST00000528787 CDC42SE1Q9NRR8 79 aa3.54□□□□□ -1.84
SSBP3-211ENST00000528787 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
SSBP3-211ENST00000528787 UQCR11O14957 56 aa3.52□□□□□ -1.85
SSBP3-211ENST00000528787 KRTAP19-8Q3LI54 63 aa3.52□□□□□ -1.85
SSBP3-211ENST00000528787 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
SSBP3-211ENST00000528787 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
SSBP3-211ENST00000528787 A8MU10 97 aa3.48□□□□□ -1.85
SSBP3-211ENST00000528787 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SSBP3-211ENST00000528787 K7ERS5 55 aa3.45□□□□□ -1.86
SSBP3-211ENST00000528787 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
SSBP3-211ENST00000528787 MIR22HGQ0VDD5 57 aa3.42□□□□□ -1.86
SSBP3-211ENST00000528787 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
SSBP3-211ENST00000528787 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
SSBP3-211ENST00000528787 A6NED7 52 aa3.41□□□□□ -1.86
SSBP3-211ENST00000528787 MT1BP07438 61 aa3.41□□□□□ -1.86
SSBP3-211ENST00000528787 A0A0D9SG42 100 aa3.4□□□□□ -1.87
SSBP3-211ENST00000528787 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
SSBP3-211ENST00000528787 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
SSBP3-211ENST00000528787 USH2AO75445 5202 aa3.38□□□□□ -1.87
SSBP3-211ENST00000528787 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
SSBP3-211ENST00000528787 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
SSBP3-211ENST00000528787 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
SSBP3-211ENST00000528787 ROMO1P60602 79 aa3.34□□□□□ -1.87
SSBP3-211ENST00000528787 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
SSBP3-211ENST00000528787 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
SSBP3-211ENST00000528787 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
SSBP3-211ENST00000528787 KRTAP12-2P59991 146 aa3.29□□□□□ -1.88
SSBP3-211ENST00000528787 MT1XP80297 61 aa3.27□□□□□ -1.89
SSBP3-211ENST00000528787 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
SSBP3-211ENST00000528787 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
SSBP3-211ENST00000528787 TNP1P09430 55 aa3.23□□□□□ -1.89
SSBP3-211ENST00000528787 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
SSBP3-211ENST00000528787 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
SSBP3-211ENST00000528787 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
SSBP3-211ENST00000528787 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
SSBP3-211ENST00000528787 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
SSBP3-211ENST00000528787 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
SSBP3-211ENST00000528787 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
SSBP3-211ENST00000528787 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
SSBP3-211ENST00000528787 KRTAP23-1A1A580 65 aa3.1□□□□□ -1.91
SSBP3-211ENST00000528787 NEBP20929 6669 aa3.09□□□□□ -1.91
SSBP3-211ENST00000528787 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
SSBP3-211ENST00000528787 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms