RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CAPN1-216ENST00000528739 NDUFC1O43677 76 aa6.48□□□□□ -1.37
CAPN1-216ENST00000528739 SCGB1A1P11684 91 aa6.47□□□□□ -1.37
CAPN1-216ENST00000528739 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
CAPN1-216ENST00000528739 Q5VV11 94 aa6.44□□□□□ -1.38
CAPN1-216ENST00000528739 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
CAPN1-216ENST00000528739 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
CAPN1-216ENST00000528739 A8MUN3 132 aa6.43□□□□□ -1.38
CAPN1-216ENST00000528739 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
CAPN1-216ENST00000528739 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
CAPN1-216ENST00000528739 A6NN06 94 aa6.37□□□□□ -1.39
CAPN1-216ENST00000528739 H3BPC8 53 aa6.36□□□□□ -1.39
CAPN1-216ENST00000528739 MT1BP07438 61 aa6.36□□□□□ -1.39
CAPN1-216ENST00000528739 CRIPTQ9P021 101 aa6.36□□□□□ -1.39
CAPN1-216ENST00000528739 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
CAPN1-216ENST00000528739 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
CAPN1-216ENST00000528739 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
CAPN1-216ENST00000528739 H0YAA0 97 aa6.31□□□□□ -1.4
CAPN1-216ENST00000528739 K7ERU9 68 aa6.28□□□□□ -1.4
CAPN1-216ENST00000528739 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
CAPN1-216ENST00000528739 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
CAPN1-216ENST00000528739 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
CAPN1-216ENST00000528739 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
CAPN1-216ENST00000528739 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
CAPN1-216ENST00000528739 TRAV7A0A075B6U4 112 aa6.2□□□□□ -1.42
CAPN1-216ENST00000528739 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
CAPN1-216ENST00000528739 R4GN34 69 aa6.19□□□□□ -1.42
CAPN1-216ENST00000528739 ACYP2P14621 99 aa6.18□□□□□ -1.42
CAPN1-216ENST00000528739 P0C880 135 aa6.15□□□□□ -1.42
CAPN1-216ENST00000528739 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
CAPN1-216ENST00000528739 M0QZ58 72 aa6.14□□□□□ -1.43
CAPN1-216ENST00000528739 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
CAPN1-216ENST00000528739 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
CAPN1-216ENST00000528739 SNURFQ9Y675 71 aa6.12□□□□□ -1.43
CAPN1-216ENST00000528739 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
CAPN1-216ENST00000528739 PRO2289Q9P1D8 64 aa6.08□□□□□ -1.44
CAPN1-216ENST00000528739 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
CAPN1-216ENST00000528739 SERP2Q8N6R1 65 aa6□□□□□ -1.45
CAPN1-216ENST00000528739 MT1XP80297 61 aa5.97□□□□□ -1.45
CAPN1-216ENST00000528739 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
CAPN1-216ENST00000528739 MUC12Q9UKN1 5478 aa5.95□□□□□ -1.46
CAPN1-216ENST00000528739 NEBP20929 6669 aa5.92□□□□□ -1.46
CAPN1-216ENST00000528739 KRTAP5-9P26371 169 aa5.89□□□□□ -1.47
CAPN1-216ENST00000528739 KMT2DO14686 5537 aa5.85□□□□□ -1.47
CAPN1-216ENST00000528739 COA5Q86WW8 74 aa5.84□□□□□ -1.47
CAPN1-216ENST00000528739 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
CAPN1-216ENST00000528739 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
CAPN1-216ENST00000528739 COX7CP15954 63 aa5.83□□□□□ -1.48
CAPN1-216ENST00000528739 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
CAPN1-216ENST00000528739 SEC61GP60059 68 aa5.81□□□□□ -1.48
CAPN1-216ENST00000528739 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
CAPN1-216ENST00000528739 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
CAPN1-216ENST00000528739 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
CAPN1-216ENST00000528739 SPRR2EP22531 72 aa5.76□□□□□ -1.49
CAPN1-216ENST00000528739 SPRR2BP35325 72 aa5.76□□□□□ -1.49
CAPN1-216ENST00000528739 SPRR2AP35326 72 aa5.76□□□□□ -1.49
CAPN1-216ENST00000528739 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
CAPN1-216ENST00000528739 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
CAPN1-216ENST00000528739 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
CAPN1-216ENST00000528739 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
CAPN1-216ENST00000528739 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
CAPN1-216ENST00000528739 H7BZZ5 65 aa5.7□□□□□ -1.5
CAPN1-216ENST00000528739 A0A0D9SG42 100 aa5.69□□□□□ -1.5
CAPN1-216ENST00000528739 ANAPC13Q9BS18 74 aa5.69□□□□□ -1.5
CAPN1-216ENST00000528739 CYSTM1Q9H1C7 97 aa5.69□□□□□ -1.5
CAPN1-216ENST00000528739 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CAPN1-216ENST00000528739 A0A1B0GU33 70 aa5.64□□□□□ -1.51
CAPN1-216ENST00000528739 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
CAPN1-216ENST00000528739 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
CAPN1-216ENST00000528739 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
CAPN1-216ENST00000528739 SPINT4Q6UDR6 99 aa5.62□□□□□ -1.51
CAPN1-216ENST00000528739 LCE1AQ5T7P2 110 aa5.61□□□□□ -1.51
CAPN1-216ENST00000528739 A0A1B0GU69 56 aa5.58□□□□□ -1.52
CAPN1-216ENST00000528739 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CAPN1-216ENST00000528739 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
CAPN1-216ENST00000528739 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
CAPN1-216ENST00000528739 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
CAPN1-216ENST00000528739 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
CAPN1-216ENST00000528739 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
CAPN1-216ENST00000528739 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
CAPN1-216ENST00000528739 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
CAPN1-216ENST00000528739 A8MU10 97 aa5.43□□□□□ -1.54
CAPN1-216ENST00000528739 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
CAPN1-216ENST00000528739 TMEM258P61165 79 aa5.35□□□□□ -1.55
CAPN1-216ENST00000528739 PCP4P48539 62 aa5.32□□□□□ -1.56
CAPN1-216ENST00000528739 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
CAPN1-216ENST00000528739 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
CAPN1-216ENST00000528739 MT1EP04732 61 aa5.3□□□□□ -1.56
CAPN1-216ENST00000528739 TNP1P09430 55 aa5.26□□□□□ -1.57
CAPN1-216ENST00000528739 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
CAPN1-216ENST00000528739 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
CAPN1-216ENST00000528739 UQCR11O14957 56 aa5.23□□□□□ -1.57
CAPN1-216ENST00000528739 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
CAPN1-216ENST00000528739 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
CAPN1-216ENST00000528739 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
CAPN1-216ENST00000528739 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
CAPN1-216ENST00000528739 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
CAPN1-216ENST00000528739 MT1GP13640 62 aa5.14□□□□□ -1.59
CAPN1-216ENST00000528739 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
CAPN1-216ENST00000528739 K7ERS5 55 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms