RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 Q5VSD8 79 aa9.8□□□□□ -0.84
TM9SF1-206ENST00000528669 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
TM9SF1-206ENST00000528669 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
TM9SF1-206ENST00000528669 XP32Q5T750 250 aa9.71□□□□□ -0.85
TM9SF1-206ENST00000528669 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
TM9SF1-206ENST00000528669 RYR1P21817 5038 aa9.69□□□□□ -0.86
TM9SF1-206ENST00000528669 RYR3Q15413 4870 aa9.68□□□□□ -0.86
TM9SF1-206ENST00000528669 KRTAP17-1Q9BYP8 105 aa9.67□□□□□ -0.86
TM9SF1-206ENST00000528669 KRTAP10-6P60371 365 aaPredicted RBP9.61□□□□□ -0.87
TM9SF1-206ENST00000528669 H3BS24 57 aa9.6□□□□□ -0.87
TM9SF1-206ENST00000528669 S4R3F8 94 aa9.58□□□□□ -0.88
TM9SF1-206ENST00000528669 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
TM9SF1-206ENST00000528669 K7ERS5 55 aa9.55□□□□□ -0.88
TM9SF1-206ENST00000528669 KRTAP13-4Q3LI77 160 aa9.55□□□□□ -0.88
TM9SF1-206ENST00000528669 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
TM9SF1-206ENST00000528669 LPAP08519 4548 aa9.54□□□□□ -0.88
TM9SF1-206ENST00000528669 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
TM9SF1-206ENST00000528669 A0A0D9SG42 100 aa9.51□□□□□ -0.89
TM9SF1-206ENST00000528669 KRTAP25-1Q3LHN0 102 aa9.51□□□□□ -0.89
TM9SF1-206ENST00000528669 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
TM9SF1-206ENST00000528669 P0C880 135 aa9.45□□□□□ -0.9
TM9SF1-206ENST00000528669 LRP2P98164 4655 aa9.45□□□□□ -0.9
TM9SF1-206ENST00000528669 ROMO1P60602 79 aa9.36□□□□□ -0.91
TM9SF1-206ENST00000528669 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
TM9SF1-206ENST00000528669 TPRXLQ17RH7 258 aa9.29□□□□□ -0.92
TM9SF1-206ENST00000528669 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.92
TM9SF1-206ENST00000528669 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
TM9SF1-206ENST00000528669 SPINT4Q6UDR6 99 aa9.17□□□□□ -0.94
TM9SF1-206ENST00000528669 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.94
TM9SF1-206ENST00000528669 KRTAP12-1P59990 96 aa9.14□□□□□ -0.95
TM9SF1-206ENST00000528669 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
TM9SF1-206ENST00000528669 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
TM9SF1-206ENST00000528669 M0QZ58 72 aa9.06□□□□□ -0.96
TM9SF1-206ENST00000528669 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
TM9SF1-206ENST00000528669 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
TM9SF1-206ENST00000528669 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
TM9SF1-206ENST00000528669 R4GN34 69 aa8.91□□□□□ -0.98
TM9SF1-206ENST00000528669 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
TM9SF1-206ENST00000528669 J3QL48 77 aa8.83□□□□□ -1
TM9SF1-206ENST00000528669 HERC2O95714 4834 aa8.83□□□□□ -1
TM9SF1-206ENST00000528669 KRTAP19-2Q3LHN2 52 aa8.71□□□□□ -1.01
TM9SF1-206ENST00000528669 MUC2Q02817 5179 aa8.69□□□□□ -1.02
TM9SF1-206ENST00000528669 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
TM9SF1-206ENST00000528669 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
TM9SF1-206ENST00000528669 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
TM9SF1-206ENST00000528669 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
TM9SF1-206ENST00000528669 CAMK2N1Q7Z7J9 78 aa8.46□□□□□ -1.05
TM9SF1-206ENST00000528669 HERC1Q15751 4861 aa8.42□□□□□ -1.06
TM9SF1-206ENST00000528669 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
TM9SF1-206ENST00000528669 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
TM9SF1-206ENST00000528669 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
TM9SF1-206ENST00000528669 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
TM9SF1-206ENST00000528669 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
TM9SF1-206ENST00000528669 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
TM9SF1-206ENST00000528669 TNP1P09430 55 aa8.11□□□□□ -1.11
TM9SF1-206ENST00000528669 M0R2T5 61 aa8.04□□□□□ -1.12
TM9SF1-206ENST00000528669 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
TM9SF1-206ENST00000528669 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
TM9SF1-206ENST00000528669 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
TM9SF1-206ENST00000528669 UBR4Q5T4S7 5183 aa7.98□□□□□ -1.13
TM9SF1-206ENST00000528669 MT1HP80294 61 aa7.97□□□□□ -1.13
TM9SF1-206ENST00000528669 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
TM9SF1-206ENST00000528669 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
TM9SF1-206ENST00000528669 MT1FP04733 61 aa7.88□□□□□ -1.15
TM9SF1-206ENST00000528669 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
TM9SF1-206ENST00000528669 MT2AP02795 61 aa7.86□□□□□ -1.15
TM9SF1-206ENST00000528669 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
TM9SF1-206ENST00000528669 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
TM9SF1-206ENST00000528669 SPRR5A0A1B0GTR4 108 aa7.69□□□□□ -1.18
TM9SF1-206ENST00000528669 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.18
TM9SF1-206ENST00000528669 MT1BP07438 61 aa7.6□□□□□ -1.19
TM9SF1-206ENST00000528669 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
TM9SF1-206ENST00000528669 MT1XP80297 61 aa7.55□□□□□ -1.2
TM9SF1-206ENST00000528669 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
TM9SF1-206ENST00000528669 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
TM9SF1-206ENST00000528669 KRTAP10-12P60413 245 aa7.4□□□□□ -1.22
TM9SF1-206ENST00000528669 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
TM9SF1-206ENST00000528669 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
TM9SF1-206ENST00000528669 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
TM9SF1-206ENST00000528669 USH2AO75445 5202 aa7.19□□□□□ -1.26
TM9SF1-206ENST00000528669 LCE2BO14633 110 aa7.18□□□□□ -1.26
TM9SF1-206ENST00000528669 KMT2DO14686 5537 aa7.11□□□□□ -1.27
TM9SF1-206ENST00000528669 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
TM9SF1-206ENST00000528669 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
TM9SF1-206ENST00000528669 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
TM9SF1-206ENST00000528669 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
TM9SF1-206ENST00000528669 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
TM9SF1-206ENST00000528669 INE1O15225 51 aa6.84□□□□□ -1.31
TM9SF1-206ENST00000528669 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
TM9SF1-206ENST00000528669 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
TM9SF1-206ENST00000528669 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
TM9SF1-206ENST00000528669 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
TM9SF1-206ENST00000528669 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
TM9SF1-206ENST00000528669 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
TM9SF1-206ENST00000528669 MT1LQ93083 61 aa6.53□□□□□ -1.36
TM9SF1-206ENST00000528669 MT1EP04732 61 aa6.52□□□□□ -1.36
TM9SF1-206ENST00000528669 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
TM9SF1-206ENST00000528669 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.39
TM9SF1-206ENST00000528669 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.39
TM9SF1-206ENST00000528669 KRTAP2-1Q9BYU5 128 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms