RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 CSAG1Q6PB30 78 aa3.36□□□□□ -1.87
USP48-212ENST00000527823 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
USP48-212ENST00000527823 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
USP48-212ENST00000527823 DLEU1O43261 78 aa3.34□□□□□ -1.87
USP48-212ENST00000527823 NDUFS5O43920 106 aa3.34□□□□□ -1.87
USP48-212ENST00000527823 FXYD2P54710 66 aa3.34□□□□□ -1.87
USP48-212ENST00000527823 HIST1H2BLQ99880 126 aa3.34□□□□□ -1.87
USP48-212ENST00000527823 HIST3H2BBQ8N257 126 aa3.33□□□□□ -1.88
USP48-212ENST00000527823 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
USP48-212ENST00000527823 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
USP48-212ENST00000527823 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
USP48-212ENST00000527823 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
USP48-212ENST00000527823 C9JAW5 83 aa3.31□□□□□ -1.88
USP48-212ENST00000527823 K7EQZ3 153 aa3.31□□□□□ -1.88
USP48-212ENST00000527823 K7ERJ3 54 aa3.31□□□□□ -1.88
USP48-212ENST00000527823 C14orf144Q96I85 54 aa3.31□□□□□ -1.88
USP48-212ENST00000527823 PSMB2P49721 201 aa3.29□□□□□ -1.88
USP48-212ENST00000527823 Q8N9L7 120 aa3.28□□□□□ -1.88
USP48-212ENST00000527823 S100A2P29034 98 aa3.27□□□□□ -1.89
USP48-212ENST00000527823 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
USP48-212ENST00000527823 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
USP48-212ENST00000527823 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
USP48-212ENST00000527823 LOC110117498A0A087WWA1 95 aa3.25□□□□□ -1.89
USP48-212ENST00000527823 COX6CP09669 75 aa3.25□□□□□ -1.89
USP48-212ENST00000527823 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
USP48-212ENST00000527823 A0A1B0GW54 56 aa3.24□□□□□ -1.89
USP48-212ENST00000527823 SPATA45Q537H7 98 aa3.24□□□□□ -1.89
USP48-212ENST00000527823 HCG22E2RYF7 251 aa3.23□□□□□ -1.89
USP48-212ENST00000527823 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
USP48-212ENST00000527823 A0A087WVE0 104 aa3.22□□□□□ -1.89
USP48-212ENST00000527823 A8MUN3 132 aa3.22□□□□□ -1.89
USP48-212ENST00000527823 BAALC-AS2P0C853 105 aa3.22□□□□□ -1.89
USP48-212ENST00000527823 NREPQ16612 68 aa3.21□□□□□ -1.9
USP48-212ENST00000527823 C14orf132Q9NPU4 83 aa3.21□□□□□ -1.9
USP48-212ENST00000527823 JMJD7-PLA2G4BH0Y9G9 81 aa3.19□□□□□ -1.9
USP48-212ENST00000527823 HSD52Q0P140 79 aa3.19□□□□□ -1.9
USP48-212ENST00000527823 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
USP48-212ENST00000527823 CASC2Q6XLA1 102 aa3.19□□□□□ -1.9
USP48-212ENST00000527823 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
USP48-212ENST00000527823 VAMP8Q9BV40 100 aa3.18□□□□□ -1.9
USP48-212ENST00000527823 H0YAA0 97 aa3.17□□□□□ -1.9
USP48-212ENST00000527823 PDE6GP18545 87 aa3.17□□□□□ -1.9
USP48-212ENST00000527823 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
USP48-212ENST00000527823 SCGB1C2P0DMR2 95 aa3.16□□□□□ -1.9
USP48-212ENST00000527823 BPY2O14599 106 aa3.15□□□□□ -1.91
USP48-212ENST00000527823 S100A6P06703 90 aa3.14□□□□□ -1.91
USP48-212ENST00000527823 ADM2Q7Z4H4 148 aa3.13□□□□□ -1.91
USP48-212ENST00000527823 ATXN8Q156A1 80 aa3.12□□□□□ -1.91
USP48-212ENST00000527823 MT4P47944 62 aa3.11□□□□□ -1.91
USP48-212ENST00000527823 NAA38Q9BRA0 125 aaKnown RBP3.09□□□□□ -1.91
USP48-212ENST00000527823 S100A1P23297 94 aa3.08□□□□□ -1.92
USP48-212ENST00000527823 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
USP48-212ENST00000527823 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
USP48-212ENST00000527823 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
USP48-212ENST00000527823 K7EP34 96 aa3.06□□□□□ -1.92
USP48-212ENST00000527823 NDUFC1O43677 76 aa3.06□□□□□ -1.92
USP48-212ENST00000527823 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
USP48-212ENST00000527823 R4GN34 69 aa3.06□□□□□ -1.92
USP48-212ENST00000527823 P0C880 135 aa3.05□□□□□ -1.92
USP48-212ENST00000527823 CYP4F30PQ9H0H9 118 aa3.05□□□□□ -1.92
USP48-212ENST00000527823 M0QZ58 72 aa3.04□□□□□ -1.92
USP48-212ENST00000527823 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
USP48-212ENST00000527823 MT1EP04732 61 aa3.03□□□□□ -1.92
USP48-212ENST00000527823 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 PYY3Q5JQD4 70 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 CYSTM1Q9H1C7 97 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 TP53AIP1Q9HCN2 124 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 UQCR10Q9UDW1 63 aa3.01□□□□□ -1.93
USP48-212ENST00000527823 H3BT86 120 aa2.97□□□□□ -1.93
USP48-212ENST00000527823 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
USP48-212ENST00000527823 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
USP48-212ENST00000527823 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.94
USP48-212ENST00000527823 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.94
USP48-212ENST00000527823 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
USP48-212ENST00000527823 SEC61GP60059 68 aa2.95□□□□□ -1.94
USP48-212ENST00000527823 C20orf197Q8N268 126 aa2.95□□□□□ -1.94
USP48-212ENST00000527823 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
USP48-212ENST00000527823 TSTD3H0UI37 97 aa2.92□□□□□ -1.94
USP48-212ENST00000527823 ACYP1P07311 99 aa2.92□□□□□ -1.94
USP48-212ENST00000527823 UBL5Q9BZL1 73 aa2.92□□□□□ -1.94
USP48-212ENST00000527823 PP632Q6XCG6 107 aa2.91□□□□□ -1.94
USP48-212ENST00000527823 SPCS1Q9Y6A9 102 aa2.91□□□□□ -1.94
USP48-212ENST00000527823 M0R143 59 aa2.9□□□□□ -1.95
USP48-212ENST00000527823 MT1GP13640 62 aa2.9□□□□□ -1.95
USP48-212ENST00000527823 MT1MQ8N339 61 aa2.9□□□□□ -1.95
USP48-212ENST00000527823 BATFQ16520 125 aa2.88□□□□□ -1.95
USP48-212ENST00000527823 A0A1W2PPM0 123 aa2.85□□□□□ -1.95
USP48-212ENST00000527823 H0Y9P7 68 aa2.85□□□□□ -1.95
USP48-212ENST00000527823 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
USP48-212ENST00000527823 MT-ATP8P03928 68 aa2.84□□□□□ -1.95
USP48-212ENST00000527823 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
USP48-212ENST00000527823 MT1LQ93083 61 aa2.83□□□□□ -1.96
USP48-212ENST00000527823 ATOX1O00244 68 aa2.82□□□□□ -1.96
USP48-212ENST00000527823 UQCRQO14949 82 aa2.79□□□□□ -1.96
USP48-212ENST00000527823 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
USP48-212ENST00000527823 TAX1BP3O14907 124 aa2.78□□□□□ -1.96
USP48-212ENST00000527823 LOC105371267A0A1B0GV96 52 aa2.77□□□□□ -1.97
USP48-212ENST00000527823 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
USP48-212ENST00000527823 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms