RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
CAPN1-208ENST00000527323 C9orf92A6NGG3 77 aa6.84□□□□□ -1.31
CAPN1-208ENST00000527323 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
CAPN1-208ENST00000527323 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
CAPN1-208ENST00000527323 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
CAPN1-208ENST00000527323 A0A1B0GU33 70 aa6.77□□□□□ -1.33
CAPN1-208ENST00000527323 H0YAA0 97 aa6.77□□□□□ -1.33
CAPN1-208ENST00000527323 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
CAPN1-208ENST00000527323 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
CAPN1-208ENST00000527323 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
CAPN1-208ENST00000527323 A8MUU9 505 aa6.71□□□□□ -1.33
CAPN1-208ENST00000527323 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
CAPN1-208ENST00000527323 HERC2O95714 4834 aa6.71□□□□□ -1.34
CAPN1-208ENST00000527323 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
CAPN1-208ENST00000527323 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
CAPN1-208ENST00000527323 TNXBP22105 4242 aa6.66□□□□□ -1.34
CAPN1-208ENST00000527323 K7ERS5 55 aa6.64□□□□□ -1.35
CAPN1-208ENST00000527323 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
CAPN1-208ENST00000527323 LPAP08519 4548 aa6.62□□□□□ -1.35
CAPN1-208ENST00000527323 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
CAPN1-208ENST00000527323 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
CAPN1-208ENST00000527323 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
CAPN1-208ENST00000527323 HERC1Q15751 4861 aa6.6□□□□□ -1.35
CAPN1-208ENST00000527323 LRP2P98164 4655 aa6.55□□□□□ -1.36
CAPN1-208ENST00000527323 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
CAPN1-208ENST00000527323 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
CAPN1-208ENST00000527323 A0A0D9SG42 100 aa6.5□□□□□ -1.37
CAPN1-208ENST00000527323 LUZP6Q538Z0 58 aa6.48□□□□□ -1.37
CAPN1-208ENST00000527323 ROMO1P60602 79 aa6.48□□□□□ -1.37
CAPN1-208ENST00000527323 MUC2Q02817 5179 aa6.47□□□□□ -1.37
CAPN1-208ENST00000527323 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
CAPN1-208ENST00000527323 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
CAPN1-208ENST00000527323 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
CAPN1-208ENST00000527323 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
CAPN1-208ENST00000527323 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.39
CAPN1-208ENST00000527323 S4R3F8 94 aa6.39□□□□□ -1.39
CAPN1-208ENST00000527323 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
CAPN1-208ENST00000527323 RNF213Q63HN8 5207 aa6.34□□□□□ -1.4
CAPN1-208ENST00000527323 P0C880 135 aa6.33□□□□□ -1.4
CAPN1-208ENST00000527323 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
CAPN1-208ENST00000527323 XP32Q5T750 250 aa6.31□□□□□ -1.4
CAPN1-208ENST00000527323 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
CAPN1-208ENST00000527323 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
CAPN1-208ENST00000527323 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
CAPN1-208ENST00000527323 LCE2BO14633 110 aa6.27□□□□□ -1.41
CAPN1-208ENST00000527323 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
CAPN1-208ENST00000527323 HMCN2Q8NDA2 5059 aa6.17□□□□□ -1.42
CAPN1-208ENST00000527323 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
CAPN1-208ENST00000527323 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.43
CAPN1-208ENST00000527323 M0QZ58 72 aa6.1□□□□□ -1.43
CAPN1-208ENST00000527323 NDUFAF8A1L188 74 aa6.09□□□□□ -1.44
CAPN1-208ENST00000527323 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
CAPN1-208ENST00000527323 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
CAPN1-208ENST00000527323 R4GN34 69 aa5.99□□□□□ -1.45
CAPN1-208ENST00000527323 MUC17Q685J3 4493 aa5.96□□□□□ -1.46
CAPN1-208ENST00000527323 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
CAPN1-208ENST00000527323 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
CAPN1-208ENST00000527323 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
CAPN1-208ENST00000527323 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
CAPN1-208ENST00000527323 M0R2T5 61 aa5.67□□□□□ -1.5
CAPN1-208ENST00000527323 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
CAPN1-208ENST00000527323 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
CAPN1-208ENST00000527323 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
CAPN1-208ENST00000527323 MT1HP80294 61 aa5.52□□□□□ -1.53
CAPN1-208ENST00000527323 TNP1P09430 55 aa5.49□□□□□ -1.53
CAPN1-208ENST00000527323 USH2AO75445 5202 aa5.48□□□□□ -1.53
CAPN1-208ENST00000527323 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
CAPN1-208ENST00000527323 MT1FP04733 61 aa5.34□□□□□ -1.55
CAPN1-208ENST00000527323 MT2AP02795 61 aa5.31□□□□□ -1.56
CAPN1-208ENST00000527323 KRTAP9-8Q9BYQ0 159 aa5.29□□□□□ -1.56
CAPN1-208ENST00000527323 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
CAPN1-208ENST00000527323 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
CAPN1-208ENST00000527323 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
CAPN1-208ENST00000527323 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
CAPN1-208ENST00000527323 LCE3AQ5TA76 89 aa5.15□□□□□ -1.58
CAPN1-208ENST00000527323 KMT2DO14686 5537 aa5.09□□□□□ -1.59
CAPN1-208ENST00000527323 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
CAPN1-208ENST00000527323 SSPOA2VEC9 5147 aa5□□□□□ -1.61
CAPN1-208ENST00000527323 MT1BP07438 61 aa4.98□□□□□ -1.61
CAPN1-208ENST00000527323 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.61
CAPN1-208ENST00000527323 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
CAPN1-208ENST00000527323 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CAPN1-208ENST00000527323 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
CAPN1-208ENST00000527323 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
CAPN1-208ENST00000527323 MT1XP80297 61 aa4.89□□□□□ -1.63
CAPN1-208ENST00000527323 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
CAPN1-208ENST00000527323 INE1O15225 51 aa4.79□□□□□ -1.64
CAPN1-208ENST00000527323 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
CAPN1-208ENST00000527323 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
CAPN1-208ENST00000527323 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
CAPN1-208ENST00000527323 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
CAPN1-208ENST00000527323 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
CAPN1-208ENST00000527323 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
CAPN1-208ENST00000527323 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.66
CAPN1-208ENST00000527323 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
CAPN1-208ENST00000527323 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
CAPN1-208ENST00000527323 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
CAPN1-208ENST00000527323 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
CAPN1-208ENST00000527323 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
CAPN1-208ENST00000527323 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms