RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 SMIM20Q8N5G0 67 aa5.15□□□□□ -1.59
NEDD8-205ENST00000527046 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
NEDD8-205ENST00000527046 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
NEDD8-205ENST00000527046 MT1FP04733 61 aa5.13□□□□□ -1.59
NEDD8-205ENST00000527046 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
NEDD8-205ENST00000527046 LCA10Q71F78 164 aa5.11□□□□□ -1.59
NEDD8-205ENST00000527046 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
NEDD8-205ENST00000527046 S4R3F8 94 aa5.08□□□□□ -1.6
NEDD8-205ENST00000527046 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
NEDD8-205ENST00000527046 SNURFQ9Y675 71 aa5.07□□□□□ -1.6
NEDD8-205ENST00000527046 A8MUN3 132 aa5.04□□□□□ -1.6
NEDD8-205ENST00000527046 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
NEDD8-205ENST00000527046 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
NEDD8-205ENST00000527046 COX7CP15954 63 aa5.03□□□□□ -1.6
NEDD8-205ENST00000527046 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
NEDD8-205ENST00000527046 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
NEDD8-205ENST00000527046 CYSTM1Q9H1C7 97 aa5.02□□□□□ -1.61
NEDD8-205ENST00000527046 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
NEDD8-205ENST00000527046 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
NEDD8-205ENST00000527046 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
NEDD8-205ENST00000527046 H7BZZ5 65 aa4.94□□□□□ -1.62
NEDD8-205ENST00000527046 NDUFC1O43677 76 aa4.94□□□□□ -1.62
NEDD8-205ENST00000527046 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
NEDD8-205ENST00000527046 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
NEDD8-205ENST00000527046 ACYP2P14621 99 aa4.92□□□□□ -1.62
NEDD8-205ENST00000527046 H0YAA0 97 aa4.9□□□□□ -1.63
NEDD8-205ENST00000527046 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
NEDD8-205ENST00000527046 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
NEDD8-205ENST00000527046 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
NEDD8-205ENST00000527046 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
NEDD8-205ENST00000527046 TMEM258P61165 79 aa4.85□□□□□ -1.63
NEDD8-205ENST00000527046 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
NEDD8-205ENST00000527046 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
NEDD8-205ENST00000527046 USH2AO75445 5202 aa4.84□□□□□ -1.63
NEDD8-205ENST00000527046 P0C880 135 aa4.82□□□□□ -1.64
NEDD8-205ENST00000527046 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
NEDD8-205ENST00000527046 V9GYY9 64 aa4.81□□□□□ -1.64
NEDD8-205ENST00000527046 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
NEDD8-205ENST00000527046 MT1BP07438 61 aa4.8□□□□□ -1.64
NEDD8-205ENST00000527046 SEC61GP60059 68 aa4.8□□□□□ -1.64
NEDD8-205ENST00000527046 COA5Q86WW8 74 aa4.8□□□□□ -1.64
NEDD8-205ENST00000527046 SSPOA2VEC9 5147 aa4.77□□□□□ -1.65
NEDD8-205ENST00000527046 CRIPTQ9P021 101 aa4.77□□□□□ -1.65
NEDD8-205ENST00000527046 CHKB-CPT1BH3BT56 60 aa4.76□□□□□ -1.65
NEDD8-205ENST00000527046 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
NEDD8-205ENST00000527046 SPTSSBQ8NFR3 76 aa4.73□□□□□ -1.65
NEDD8-205ENST00000527046 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
NEDD8-205ENST00000527046 SMIM26A0A096LP01 95 aa4.7□□□□□ -1.66
NEDD8-205ENST00000527046 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
NEDD8-205ENST00000527046 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
NEDD8-205ENST00000527046 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
NEDD8-205ENST00000527046 Q5VV11 94 aa4.67□□□□□ -1.66
NEDD8-205ENST00000527046 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
NEDD8-205ENST00000527046 M0QZ58 72 aa4.64□□□□□ -1.67
NEDD8-205ENST00000527046 R4GN34 69 aa4.63□□□□□ -1.67
NEDD8-205ENST00000527046 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
NEDD8-205ENST00000527046 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
NEDD8-205ENST00000527046 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
NEDD8-205ENST00000527046 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
NEDD8-205ENST00000527046 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
NEDD8-205ENST00000527046 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
NEDD8-205ENST00000527046 BRK1Q8WUW1 75 aa4.57□□□□□ -1.68
NEDD8-205ENST00000527046 MT1XP80297 61 aa4.54□□□□□ -1.68
NEDD8-205ENST00000527046 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
NEDD8-205ENST00000527046 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
NEDD8-205ENST00000527046 A6NN06 94 aa4.52□□□□□ -1.69
NEDD8-205ENST00000527046 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
NEDD8-205ENST00000527046 A0A1B0GU33 70 aa4.51□□□□□ -1.69
NEDD8-205ENST00000527046 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
NEDD8-205ENST00000527046 A0A1B0GU69 56 aa4.5□□□□□ -1.69
NEDD8-205ENST00000527046 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
NEDD8-205ENST00000527046 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
NEDD8-205ENST00000527046 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
NEDD8-205ENST00000527046 Q1T7F1 81 aa4.42□□□□□ -1.7
NEDD8-205ENST00000527046 A0A0D9SG42 100 aa4.41□□□□□ -1.7
NEDD8-205ENST00000527046 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
NEDD8-205ENST00000527046 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
NEDD8-205ENST00000527046 A8MU10 97 aa4.4□□□□□ -1.71
NEDD8-205ENST00000527046 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
NEDD8-205ENST00000527046 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
NEDD8-205ENST00000527046 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
NEDD8-205ENST00000527046 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
NEDD8-205ENST00000527046 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
NEDD8-205ENST00000527046 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
NEDD8-205ENST00000527046 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
NEDD8-205ENST00000527046 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
NEDD8-205ENST00000527046 PSPHP1O15172 72 aa4.31□□□□□ -1.72
NEDD8-205ENST00000527046 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
NEDD8-205ENST00000527046 UQCR11O14957 56 aa4.29□□□□□ -1.72
NEDD8-205ENST00000527046 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
NEDD8-205ENST00000527046 NEBP20929 6669 aa4.29□□□□□ -1.72
NEDD8-205ENST00000527046 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
NEDD8-205ENST00000527046 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
NEDD8-205ENST00000527046 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
NEDD8-205ENST00000527046 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
NEDD8-205ENST00000527046 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
NEDD8-205ENST00000527046 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
NEDD8-205ENST00000527046 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
NEDD8-205ENST00000527046 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
NEDD8-205ENST00000527046 KMT2DO14686 5537 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms