RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ATMQ13315 3056 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 CLASP1Q7Z460 1538 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 PRXQ9BXM0 1461 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 USH2AO75445 5202 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 DNAH1Q9P2D7 4330 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 PRUNE2Q8WUY3 3088 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 CDC42BPAQ5VT25 1732 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 TOGARAM1Q9Y4F4 1720 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 UNC80Q8N2C7 3258 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 SPENQ96T58 3664 aaKnown RBP-0.02□□□□□ -2.41
COPB1-203ENST00000525214 CFAP54Q96N23 3096 aa-0.02□□□□□ -2.41
COPB1-203ENST00000525214 DNAH2Q9P225 4427 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 EP400Q96L91 3159 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 LINC00308Q8TCZ7 52 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 TMEM167BQ9NRX6 74 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 LAMA5O15230 3695 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 SPTBN5Q9NRC6 3674 aaKnown RBP-0.03□□□□□ -2.41
COPB1-203ENST00000525214 EYSQ5T1H1 3165 aa-0.03□□□□□ -2.41
COPB1-203ENST00000525214 H0YGX0 51 aa-0.04□□□□□ -2.42
COPB1-203ENST00000525214 SPRR2EP22531 72 aa-0.04□□□□□ -2.42
COPB1-203ENST00000525214 STARD9Q9P2P6 4700 aa-0.04□□□□□ -2.42
COPB1-203ENST00000525214 CHD7Q9P2D1 2997 aa-0.04□□□□□ -2.42
COPB1-203ENST00000525214 ADGRG4Q8IZF6 3080 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 MAST1Q9Y2H9 1570 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 TRIOO75962 3097 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 MT4P47944 62 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 KRTAP19-8Q3LI54 63 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 DNAH8Q96JB1 4490 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 CENPEQ02224 2701 aa-0.05□□□□□ -2.42
COPB1-203ENST00000525214 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.05□□□□□ -2.42
COPB1-203ENST00000525214 NOP10Q9NPE3 64 aaKnown RBP-0.06□□□□□ -2.42
COPB1-203ENST00000525214 BIRC6Q9NR09 4857 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 C5orf42Q9H799 3197 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 MROH2AA6NES4 1674 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 HERC2O95714 4834 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 FAT1Q14517 4588 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 MT1AP04731 61 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 KRTAP20-2Q3LI61 65 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 ABRACLQ9P1F3 81 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 RANBP2P49792 3224 aaKnown RBP-0.07□□□□□ -2.42
COPB1-203ENST00000525214 A0A1B0GUL6 1792 aa-0.07□□□□□ -2.42
COPB1-203ENST00000525214 AGLP35573 1532 aa-0.08□□□□□ -2.42
COPB1-203ENST00000525214 SPEGQ15772 3267 aa-0.08□□□□□ -2.42
COPB1-203ENST00000525214 SMIM27A0A1W2PRY6 76 aa-0.08□□□□□ -2.42
COPB1-203ENST00000525214 KAAG1Q9UBP8 84 aa-0.08□□□□□ -2.42
COPB1-203ENST00000525214 CEP350Q5VT06 3117 aa-0.08□□□□□ -2.42
COPB1-203ENST00000525214 PREX2Q70Z35 1606 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 CSMD2Q7Z408 3487 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 CFAP47Q6ZTR5 3102 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 MT1HL1P0DM35 61 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 PLNP26678 52 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 DEFB110Q30KQ9 67 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 MYO15AQ9UKN7 3530 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 EFCAB6Q5THR3 1501 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 FRYLO94915 3013 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 MKI67P46013 3256 aaKnown RBP-0.09□□□□□ -2.42
COPB1-203ENST00000525214 LOC400499M0QZD8 3231 aa-0.09□□□□□ -2.42
COPB1-203ENST00000525214 MGAQ8IWI9 3026 aa-0.1□□□□□ -2.42
COPB1-203ENST00000525214 CSMD1Q96PZ7 3565 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 MMP24-AS1A0A0U1RRL7 71 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 DEFB1P60022 68 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 CLPSL2Q6UWE3 100 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 MUC17Q685J3 4493 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 ZFHX4Q86UP3 3567 aa-0.1□□□□□ -2.43
COPB1-203ENST00000525214 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
COPB1-203ENST00000525214 WFDC10BQ8IUB3 73 aa-0.11□□□□□ -2.43
COPB1-203ENST00000525214 SPRR2FQ96RM1 72 aa-0.11□□□□□ -2.43
COPB1-203ENST00000525214 PCNTO95613 3336 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 SYCP2Q9BX26 1530 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 ADCY10Q96PN6 1610 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 MT1HP80294 61 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 TFF3Q07654 80 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 CMC2Q9NRP2 79 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 MUC3AQ02505 3323 aa-0.12□□□□□ -2.43
COPB1-203ENST00000525214 TNP1P09430 55 aa-0.13□□□□□ -2.43
COPB1-203ENST00000525214 KRTAP19-6Q3LI70 58 aa-0.13□□□□□ -2.43
COPB1-203ENST00000525214 FANCD2Q9BXW9 1451 aa-0.14□□□□□ -2.43
COPB1-203ENST00000525214 PLECQ15149 4684 aaKnown RBP-0.14□□□□□ -2.43
COPB1-203ENST00000525214 M0QY20 66 aa-0.14□□□□□ -2.43
COPB1-203ENST00000525214 SPART-AS1P0CW21 52 aa-0.14□□□□□ -2.43
COPB1-203ENST00000525214 LMO7Q8WWI1 1683 aa-0.14□□□□□ -2.43
COPB1-203ENST00000525214 ABCA5Q8WWZ7 1642 aa-0.15□□□□□ -2.43
COPB1-203ENST00000525214 DNAH12Q6ZR08 3092 aa-0.15□□□□□ -2.43
COPB1-203ENST00000525214 LINC01546A6NGU7 62 aa-0.15□□□□□ -2.43
COPB1-203ENST00000525214 CENPFP49454 3210 aa-0.15□□□□□ -2.43
COPB1-203ENST00000525214 FAM208AQ9UK61 1670 aaKnown RBP-0.15□□□□□ -2.43
COPB1-203ENST00000525214 DDX60Q8IY21 1712 aaKnown RBP-0.16□□□□□ -2.43
COPB1-203ENST00000525214 SMG1Q96Q15 3661 aaKnown RBP-0.16□□□□□ -2.43
COPB1-203ENST00000525214 KIF21BO75037 1637 aa-0.16□□□□□ -2.43
COPB1-203ENST00000525214 SNRPGP15A8MWD9 76 aa-0.16□□□□□ -2.44
COPB1-203ENST00000525214 MT1BP07438 61 aa-0.16□□□□□ -2.44
COPB1-203ENST00000525214 RPS29P62273 56 aaKnown RBP-0.16□□□□□ -2.44
COPB1-203ENST00000525214 VPS13AQ96RL7 3174 aa-0.16□□□□□ -2.44
COPB1-203ENST00000525214 ABCC8Q09428 1581 aa-0.16□□□□□ -2.44
COPB1-203ENST00000525214 DYNC1H1Q14204 4646 aaKnown RBP-0.16□□□□□ -2.44
COPB1-203ENST00000525214 VCANP13611 3396 aa-0.17□□□□□ -2.44
COPB1-203ENST00000525214 CMYA5Q8N3K9 4069 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms