RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TMEM258P61165 79 aa7.72□□□□□ -1.17
TSPAN4-213ENST00000524895 LCA10Q71F78 164 aa7.72□□□□□ -1.17
TSPAN4-213ENST00000524895 ATP5EP56381 51 aaPredicted RBP7.71□□□□□ -1.18
TSPAN4-213ENST00000524895 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
TSPAN4-213ENST00000524895 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
TSPAN4-213ENST00000524895 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
TSPAN4-213ENST00000524895 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
TSPAN4-213ENST00000524895 COA5Q86WW8 74 aa7.63□□□□□ -1.19
TSPAN4-213ENST00000524895 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
TSPAN4-213ENST00000524895 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
TSPAN4-213ENST00000524895 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
TSPAN4-213ENST00000524895 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
TSPAN4-213ENST00000524895 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
TSPAN4-213ENST00000524895 MT2AP02795 61 aa7.42□□□□□ -1.22
TSPAN4-213ENST00000524895 H0YAA0 97 aa7.41□□□□□ -1.22
TSPAN4-213ENST00000524895 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
TSPAN4-213ENST00000524895 MT1FP04733 61 aa7.37□□□□□ -1.23
TSPAN4-213ENST00000524895 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
TSPAN4-213ENST00000524895 SEC61GP60059 68 aa7.3□□□□□ -1.24
TSPAN4-213ENST00000524895 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
TSPAN4-213ENST00000524895 P0C880 135 aa7.28□□□□□ -1.24
TSPAN4-213ENST00000524895 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
TSPAN4-213ENST00000524895 A0A1B0GU69 56 aa7.24□□□□□ -1.25
TSPAN4-213ENST00000524895 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
TSPAN4-213ENST00000524895 SMIM26A0A096LP01 95 aa7.22□□□□□ -1.25
TSPAN4-213ENST00000524895 LINC01558Q9Y6Z2 57 aa7.22□□□□□ -1.25
TSPAN4-213ENST00000524895 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
TSPAN4-213ENST00000524895 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
TSPAN4-213ENST00000524895 V9GYY9 64 aa7.18□□□□□ -1.26
TSPAN4-213ENST00000524895 R4GN34 69 aa7.16□□□□□ -1.26
TSPAN4-213ENST00000524895 Q1T7F1 81 aa7.15□□□□□ -1.26
TSPAN4-213ENST00000524895 M0QZ58 72 aa7.14□□□□□ -1.27
TSPAN4-213ENST00000524895 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
TSPAN4-213ENST00000524895 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
TSPAN4-213ENST00000524895 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
TSPAN4-213ENST00000524895 A0A1B0GU33 70 aa7.1□□□□□ -1.27
TSPAN4-213ENST00000524895 PSPHP1O15172 72 aa7.06□□□□□ -1.28
TSPAN4-213ENST00000524895 LCE2BO14633 110 aa7.04□□□□□ -1.28
TSPAN4-213ENST00000524895 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
TSPAN4-213ENST00000524895 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
TSPAN4-213ENST00000524895 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
TSPAN4-213ENST00000524895 Q5VV11 94 aa7□□□□□ -1.29
TSPAN4-213ENST00000524895 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
TSPAN4-213ENST00000524895 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
TSPAN4-213ENST00000524895 UQCR11O14957 56 aa6.96□□□□□ -1.3
TSPAN4-213ENST00000524895 A0A0D9SG42 100 aa6.91□□□□□ -1.3
TSPAN4-213ENST00000524895 USH2AO75445 5202 aa6.9□□□□□ -1.3
TSPAN4-213ENST00000524895 MT1BP07438 61 aa6.89□□□□□ -1.31
TSPAN4-213ENST00000524895 A6NED7 52 aa6.86□□□□□ -1.31
TSPAN4-213ENST00000524895 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
TSPAN4-213ENST00000524895 A6NN06 94 aa6.85□□□□□ -1.31
TSPAN4-213ENST00000524895 A8MU10 97 aa6.85□□□□□ -1.31
TSPAN4-213ENST00000524895 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
TSPAN4-213ENST00000524895 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
TSPAN4-213ENST00000524895 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
TSPAN4-213ENST00000524895 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
TSPAN4-213ENST00000524895 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
TSPAN4-213ENST00000524895 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
TSPAN4-213ENST00000524895 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
TSPAN4-213ENST00000524895 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
TSPAN4-213ENST00000524895 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
TSPAN4-213ENST00000524895 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
TSPAN4-213ENST00000524895 K7ERS5 55 aa6.64□□□□□ -1.35
TSPAN4-213ENST00000524895 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
TSPAN4-213ENST00000524895 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
TSPAN4-213ENST00000524895 MT1XP80297 61 aa6.61□□□□□ -1.35
TSPAN4-213ENST00000524895 KRTAP9-6A0A140TA67 174 aa6.59□□□□□ -1.35
TSPAN4-213ENST00000524895 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
TSPAN4-213ENST00000524895 FCGBPQ9Y6R7 5405 aaPredicted RBP6.49□□□□□ -1.37
TSPAN4-213ENST00000524895 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
TSPAN4-213ENST00000524895 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
TSPAN4-213ENST00000524895 TNP1P09430 55 aa6.29□□□□□ -1.4
TSPAN4-213ENST00000524895 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
TSPAN4-213ENST00000524895 ROMO1P60602 79 aa6.28□□□□□ -1.4
TSPAN4-213ENST00000524895 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
TSPAN4-213ENST00000524895 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
TSPAN4-213ENST00000524895 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
TSPAN4-213ENST00000524895 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
TSPAN4-213ENST00000524895 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
TSPAN4-213ENST00000524895 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
TSPAN4-213ENST00000524895 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
TSPAN4-213ENST00000524895 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
TSPAN4-213ENST00000524895 KMT2DO14686 5537 aa6.1□□□□□ -1.43
TSPAN4-213ENST00000524895 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
TSPAN4-213ENST00000524895 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
TSPAN4-213ENST00000524895 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
TSPAN4-213ENST00000524895 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
TSPAN4-213ENST00000524895 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
TSPAN4-213ENST00000524895 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
TSPAN4-213ENST00000524895 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
TSPAN4-213ENST00000524895 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
TSPAN4-213ENST00000524895 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
TSPAN4-213ENST00000524895 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
TSPAN4-213ENST00000524895 MT1EP04732 61 aa5.83□□□□□ -1.48
TSPAN4-213ENST00000524895 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
TSPAN4-213ENST00000524895 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
TSPAN4-213ENST00000524895 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
TSPAN4-213ENST00000524895 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
TSPAN4-213ENST00000524895 SPRR2EP22531 72 aa5.72□□□□□ -1.49
TSPAN4-213ENST00000524895 SPRR2BP35325 72 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms