RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
IKBKB-228ENST00000523517 XP32Q5T750 250 aa9.2□□□□□ -0.94
IKBKB-228ENST00000523517 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
IKBKB-228ENST00000523517 HSPG2P98160 4391 aa9.18□□□□□ -0.94
IKBKB-228ENST00000523517 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
IKBKB-228ENST00000523517 K7ERS5 55 aa9.13□□□□□ -0.95
IKBKB-228ENST00000523517 S4R3F8 94 aa9.1□□□□□ -0.95
IKBKB-228ENST00000523517 KRTAP17-1Q9BYP8 105 aa9.07□□□□□ -0.96
IKBKB-228ENST00000523517 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
IKBKB-228ENST00000523517 KRTAP25-1Q3LHN0 102 aa9.06□□□□□ -0.96
IKBKB-228ENST00000523517 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
IKBKB-228ENST00000523517 KRTAP13-4Q3LI77 160 aa9.03□□□□□ -0.96
IKBKB-228ENST00000523517 MT1HL1P0DM35 61 aa9.02□□□□□ -0.96
IKBKB-228ENST00000523517 MYCBP2O75592 4640 aa9.02□□□□□ -0.96
IKBKB-228ENST00000523517 RYR1P21817 5038 aa9.02□□□□□ -0.97
IKBKB-228ENST00000523517 A0A0D9SG42 100 aa8.96□□□□□ -0.98
IKBKB-228ENST00000523517 P0C880 135 aa8.94□□□□□ -0.98
IKBKB-228ENST00000523517 ROMO1P60602 79 aa8.93□□□□□ -0.98
IKBKB-228ENST00000523517 RYR3Q15413 4870 aa8.92□□□□□ -0.98
IKBKB-228ENST00000523517 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
IKBKB-228ENST00000523517 TPRXLQ17RH7 258 aa8.84□□□□□ -0.99
IKBKB-228ENST00000523517 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
IKBKB-228ENST00000523517 LPAP08519 4548 aa8.79□□□□□ -1
IKBKB-228ENST00000523517 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
IKBKB-228ENST00000523517 LRP2P98164 4655 aa8.72□□□□□ -1.01
IKBKB-228ENST00000523517 KRTAP12-1P59990 96 aa8.69□□□□□ -1.02
IKBKB-228ENST00000523517 M0QZ58 72 aa8.67□□□□□ -1.02
IKBKB-228ENST00000523517 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
IKBKB-228ENST00000523517 C10orf95Q9H7T3 257 aa8.6□□□□□ -1.03
IKBKB-228ENST00000523517 EPPK1P58107 5090 aaKnown RBP8.59□□□□□ -1.03
IKBKB-228ENST00000523517 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
IKBKB-228ENST00000523517 ABCA13Q86UQ4 5058 aa8.53□□□□□ -1.04
IKBKB-228ENST00000523517 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
IKBKB-228ENST00000523517 R4GN34 69 aa8.44□□□□□ -1.06
IKBKB-228ENST00000523517 H3BS24 57 aa8.43□□□□□ -1.06
IKBKB-228ENST00000523517 KRTAP4-1Q9BYQ7 146 aa8.4□□□□□ -1.06
IKBKB-228ENST00000523517 MUC17Q685J3 4493 aa8.4□□□□□ -1.06
IKBKB-228ENST00000523517 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
IKBKB-228ENST00000523517 J3QL48 77 aa8.33□□□□□ -1.08
IKBKB-228ENST00000523517 KRTAP19-2Q3LHN2 52 aa8.27□□□□□ -1.09
IKBKB-228ENST00000523517 KRTAP15-1Q3LI76 137 aa8.27□□□□□ -1.09
IKBKB-228ENST00000523517 HERC2O95714 4834 aa8.15□□□□□ -1.1
IKBKB-228ENST00000523517 NDUFAF8A1L188 74 aa8.05□□□□□ -1.12
IKBKB-228ENST00000523517 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
IKBKB-228ENST00000523517 BIRC6Q9NR09 4857 aa7.98□□□□□ -1.13
IKBKB-228ENST00000523517 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
IKBKB-228ENST00000523517 MUC2Q02817 5179 aa7.94□□□□□ -1.14
IKBKB-228ENST00000523517 PLAC4Q8WY50 150 aa7.91□□□□□ -1.14
IKBKB-228ENST00000523517 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
IKBKB-228ENST00000523517 HERC1Q15751 4861 aa7.83□□□□□ -1.16
IKBKB-228ENST00000523517 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
IKBKB-228ENST00000523517 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
IKBKB-228ENST00000523517 PCLOQ9Y6V0 5065 aa7.73□□□□□ -1.17
IKBKB-228ENST00000523517 TNP1P09430 55 aa7.73□□□□□ -1.17
IKBKB-228ENST00000523517 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
IKBKB-228ENST00000523517 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
IKBKB-228ENST00000523517 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
IKBKB-228ENST00000523517 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
IKBKB-228ENST00000523517 M0R2T5 61 aa7.56□□□□□ -1.2
IKBKB-228ENST00000523517 MT1HP80294 61 aa7.54□□□□□ -1.2
IKBKB-228ENST00000523517 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
IKBKB-228ENST00000523517 MT2AP02795 61 aa7.44□□□□□ -1.22
IKBKB-228ENST00000523517 MT1FP04733 61 aa7.44□□□□□ -1.22
IKBKB-228ENST00000523517 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
IKBKB-228ENST00000523517 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
IKBKB-228ENST00000523517 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
IKBKB-228ENST00000523517 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
IKBKB-228ENST00000523517 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.23
IKBKB-228ENST00000523517 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
IKBKB-228ENST00000523517 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
IKBKB-228ENST00000523517 MT1BP07438 61 aa7.2□□□□□ -1.26
IKBKB-228ENST00000523517 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
IKBKB-228ENST00000523517 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
IKBKB-228ENST00000523517 MT1XP80297 61 aa7.16□□□□□ -1.26
IKBKB-228ENST00000523517 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.27
IKBKB-228ENST00000523517 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
IKBKB-228ENST00000523517 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
IKBKB-228ENST00000523517 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
IKBKB-228ENST00000523517 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
IKBKB-228ENST00000523517 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
IKBKB-228ENST00000523517 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
IKBKB-228ENST00000523517 LCE2BO14633 110 aa6.77□□□□□ -1.32
IKBKB-228ENST00000523517 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
IKBKB-228ENST00000523517 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
IKBKB-228ENST00000523517 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
IKBKB-228ENST00000523517 USH2AO75445 5202 aa6.53□□□□□ -1.36
IKBKB-228ENST00000523517 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
IKBKB-228ENST00000523517 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
IKBKB-228ENST00000523517 INE1O15225 51 aa6.5□□□□□ -1.37
IKBKB-228ENST00000523517 KMT2DO14686 5537 aa6.45□□□□□ -1.38
IKBKB-228ENST00000523517 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
IKBKB-228ENST00000523517 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
IKBKB-228ENST00000523517 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
IKBKB-228ENST00000523517 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
IKBKB-228ENST00000523517 MT1EP04732 61 aa6.2□□□□□ -1.42
IKBKB-228ENST00000523517 MT1LQ93083 61 aa6.2□□□□□ -1.42
IKBKB-228ENST00000523517 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
IKBKB-228ENST00000523517 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
IKBKB-228ENST00000523517 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
IKBKB-228ENST00000523517 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms