RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	ATP5EP2	Q5VTU8	51 aa		5.47	□□□□□ -1.53
VEGFA-223	ENST00000523125	UQCRQ	O14949	82 aa		5.46	□□□□□ -1.54
VEGFA-223	ENST00000523125	KRTAP10-5	P60370	271 aa		5.46	□□□□□ -1.54
VEGFA-223	ENST00000523125	HIST1H4A	P62805	103 aa	Known RBP	5.46	□□□□□ -1.54
VEGFA-223	ENST00000523125		H0Y9P7	68 aa		5.44	□□□□□ -1.54
VEGFA-223	ENST00000523125	ATOX1	O00244	68 aa		5.42	□□□□□ -1.54
VEGFA-223	ENST00000523125	CRIPT	Q9P021	101 aa		5.42	□□□□□ -1.54
VEGFA-223	ENST00000523125		A0A1B0GV90	55 aa		5.41	□□□□□ -1.54
VEGFA-223	ENST00000523125	IMUP	Q9GZP8	106 aa		5.4	□□□□□ -1.54
VEGFA-223	ENST00000523125	NDUFC1	O43677	76 aa		5.39	□□□□□ -1.55
VEGFA-223	ENST00000523125		H0YAA0	97 aa		5.38	□□□□□ -1.55
VEGFA-223	ENST00000523125	LINC00643	Q86TS7	51 aa		5.38	□□□□□ -1.55
VEGFA-223	ENST00000523125		A8MUN3	132 aa		5.35	□□□□□ -1.55
VEGFA-223	ENST00000523125	LINC00208	Q96KT6	92 aa		5.35	□□□□□ -1.55
VEGFA-223	ENST00000523125	OCR1	Q9BZK8	76 aa		5.35	□□□□□ -1.55
VEGFA-223	ENST00000523125	MUC12	Q9UKN1	5478 aa		5.32	□□□□□ -1.56
VEGFA-223	ENST00000523125	ADM2	Q7Z4H4	148 aa		5.31	□□□□□ -1.56
VEGFA-223	ENST00000523125	KRTAP5-9	P26371	169 aa		5.3	□□□□□ -1.56
VEGFA-223	ENST00000523125	NEB	P20929	6669 aa		5.3	□□□□□ -1.56
VEGFA-223	ENST00000523125	MP68	P56378	58 aa		5.28	□□□□□ -1.56
VEGFA-223	ENST00000523125	KMT2D	O14686	5537 aa		5.22	□□□□□ -1.57
VEGFA-223	ENST00000523125		H3BPC8	53 aa		5.22	□□□□□ -1.57
VEGFA-223	ENST00000523125	MT1X	P80297	61 aa		5.22	□□□□□ -1.57
VEGFA-223	ENST00000523125		P0C880	135 aa		5.21	□□□□□ -1.58
VEGFA-223	ENST00000523125	DMAC1	Q96GE9	116 aa		5.2	□□□□□ -1.58
VEGFA-223	ENST00000523125	KRTAP3-2	Q9BYR7	98 aa		5.18	□□□□□ -1.58
VEGFA-223	ENST00000523125	MDN1	Q9NU22	5596 aa		5.18	□□□□□ -1.58
VEGFA-223	ENST00000523125	PRO2289	Q9P1D8	64 aa		5.17	□□□□□ -1.58
VEGFA-223	ENST00000523125		J3QR89	54 aa		5.16	□□□□□ -1.58
VEGFA-223	ENST00000523125	PLAC4	Q8WY50	150 aa		5.16	□□□□□ -1.58
VEGFA-223	ENST00000523125		R4GN34	69 aa		5.16	□□□□□ -1.58
VEGFA-223	ENST00000523125	SCGB1A1	P11684	91 aa		5.15	□□□□□ -1.59
VEGFA-223	ENST00000523125	KRTAP20-1	Q3LI63	56 aa		5.15	□□□□□ -1.59
VEGFA-223	ENST00000523125	C20orf197	Q8N268	126 aa		5.14	□□□□□ -1.59
VEGFA-223	ENST00000523125		M0QZ58	72 aa		5.13	□□□□□ -1.59
VEGFA-223	ENST00000523125		K7ERU9	68 aa		5.11	□□□□□ -1.59
VEGFA-223	ENST00000523125	KRTAP12-2	P59991	146 aa		5.09	□□□□□ -1.59
VEGFA-223	ENST00000523125	SPRR2F	Q96RM1	72 aa		5.09	□□□□□ -1.59
VEGFA-223	ENST00000523125	TRAV7	A0A075B6U4	112 aa		5.08	□□□□□ -1.6
VEGFA-223	ENST00000523125	LINC01554	Q52M75	96 aa		5.05	□□□□□ -1.6
VEGFA-223	ENST00000523125	KRTAP8-1	Q8IUC2	63 aa		5.05	□□□□□ -1.6
VEGFA-223	ENST00000523125	MT-ATP8	P03928	68 aa		5.04	□□□□□ -1.6
VEGFA-223	ENST00000523125	ACYP2	P14621	99 aa		5.04	□□□□□ -1.6
VEGFA-223	ENST00000523125	SPRR2E	P22531	72 aa		5.03	□□□□□ -1.6
VEGFA-223	ENST00000523125	SPRR2B	P35325	72 aa		5.03	□□□□□ -1.6
VEGFA-223	ENST00000523125	SPRR2A	P35326	72 aa		5.03	□□□□□ -1.6
VEGFA-223	ENST00000523125	KRTAP4-8	A0A0G2JLE6	195 aa		5.02	□□□□□ -1.61
VEGFA-223	ENST00000523125	KRTAP2-3	P0C7H8	128 aa		5.02	□□□□□ -1.61
VEGFA-223	ENST00000523125	KRTAP4-8	Q9BYQ9	185 aa		5.02	□□□□□ -1.61
VEGFA-223	ENST00000523125	KRTAP2-4	Q9BYR9	128 aa		5.02	□□□□□ -1.61
VEGFA-223	ENST00000523125	SMIM20	Q8N5G0	67 aa		5	□□□□□ -1.61
VEGFA-223	ENST00000523125	LCE1A	Q5T7P2	110 aa		4.99	□□□□□ -1.61
VEGFA-223	ENST00000523125	PCP4	P48539	62 aa		4.98	□□□□□ -1.61
VEGFA-223	ENST00000523125	KRTAP10-7	P60409	375 aa	Predicted RBP	4.98	□□□□□ -1.61
VEGFA-223	ENST00000523125	SPTSSB	Q8NFR3	76 aa		4.96	□□□□□ -1.62
VEGFA-223	ENST00000523125	KRTAP10-12	P60413	245 aa		4.95	□□□□□ -1.62
VEGFA-223	ENST00000523125	SNURF	Q9Y675	71 aa		4.93	□□□□□ -1.62
VEGFA-223	ENST00000523125	CHKB-CPT1B	H3BT56	60 aa		4.91	□□□□□ -1.62
VEGFA-223	ENST00000523125	SPANXA2-OT1	Q8N9U9	137 aa		4.88	□□□□□ -1.63
VEGFA-223	ENST00000523125	SPRR2D	P22532	72 aa		4.86	□□□□□ -1.63
VEGFA-223	ENST00000523125	KRTAP13-4	Q3LI77	160 aa		4.86	□□□□□ -1.63
VEGFA-223	ENST00000523125	KRTAP2-2	Q9BYT5	123 aa		4.85	□□□□□ -1.63
VEGFA-223	ENST00000523125	KRTAP2-1	Q9BYU5	128 aa		4.85	□□□□□ -1.63
VEGFA-223	ENST00000523125	SERP2	Q8N6R1	65 aa		4.83	□□□□□ -1.64
VEGFA-223	ENST00000523125	COA5	Q86WW8	74 aa		4.75	□□□□□ -1.65
VEGFA-223	ENST00000523125	LCE3B	Q5TA77	95 aa		4.74	□□□□□ -1.65
VEGFA-223	ENST00000523125	CAMK2N1	Q7Z7J9	78 aa		4.73	□□□□□ -1.65
VEGFA-223	ENST00000523125	KRTAP19-7	Q3SYF9	63 aa		4.67	□□□□□ -1.66
VEGFA-223	ENST00000523125	ANAPC13	Q9BS18	74 aa		4.67	□□□□□ -1.66
VEGFA-223	ENST00000523125		A0A0D9SG42	100 aa		4.65	□□□□□ -1.67
VEGFA-223	ENST00000523125	COX7C	P15954	63 aa		4.65	□□□□□ -1.67
VEGFA-223	ENST00000523125	SPATA8	Q6RVD6	105 aa		4.65	□□□□□ -1.67
VEGFA-223	ENST00000523125	CYSTM1	Q9H1C7	97 aa		4.65	□□□□□ -1.67
VEGFA-223	ENST00000523125	SERP1	Q9Y6X1	66 aa		4.65	□□□□□ -1.67
VEGFA-223	ENST00000523125	SEC61G	P60059	68 aa		4.64	□□□□□ -1.67
VEGFA-223	ENST00000523125		H7BZZ5	65 aa		4.63	□□□□□ -1.67
VEGFA-223	ENST00000523125	LCE5A	Q5TCM9	118 aa		4.62	□□□□□ -1.67
VEGFA-223	ENST00000523125		A0A1B0GU33	70 aa		4.61	□□□□□ -1.67
VEGFA-223	ENST00000523125	MT1E	P04732	61 aa		4.61	□□□□□ -1.67
VEGFA-223	ENST00000523125	KRTAP12-1	P59990	96 aa		4.6	□□□□□ -1.67
VEGFA-223	ENST00000523125	SPINT4	Q6UDR6	99 aa		4.58	□□□□□ -1.68
VEGFA-223	ENST00000523125	KRTAP19-3	Q7Z4W3	81 aa		4.58	□□□□□ -1.68
VEGFA-223	ENST00000523125	CCDC179	H3BU77	68 aa		4.55	□□□□□ -1.68
VEGFA-223	ENST00000523125	DST	Q03001	7570 aa	Known RBP	4.55	□□□□□ -1.68
VEGFA-223	ENST00000523125	KRTAP19-5	Q3LI72	72 aa		4.52	□□□□□ -1.69
VEGFA-223	ENST00000523125		A0A1B0GU69	56 aa		4.48	□□□□□ -1.69
VEGFA-223	ENST00000523125		A8MU10	97 aa		4.47	□□□□□ -1.69
VEGFA-223	ENST00000523125	MT1G	P13640	62 aa		4.47	□□□□□ -1.69
VEGFA-223	ENST00000523125	SMIM26	A0A096LP01	95 aa		4.46	□□□□□ -1.7
VEGFA-223	ENST00000523125	KRTAP4-9	Q9BYQ8	210 aa		4.44	□□□□□ -1.7
VEGFA-223	ENST00000523125	TMEM258	P61165	79 aa		4.42	□□□□□ -1.7
VEGFA-223	ENST00000523125	ATP5E	P56381	51 aa	Predicted RBP	4.41	□□□□□ -1.7
VEGFA-223	ENST00000523125	C10orf95	Q9H7T3	257 aa		4.41	□□□□□ -1.7
VEGFA-223	ENST00000523125	PP632	Q6XCG6	107 aa		4.4	□□□□□ -1.71
VEGFA-223	ENST00000523125	MT1M	Q8N339	61 aa		4.4	□□□□□ -1.71
VEGFA-223	ENST00000523125	MT1L	Q93083	61 aa		4.4	□□□□□ -1.71
VEGFA-223	ENST00000523125	LCE3A	Q5TA76	89 aa		4.39	□□□□□ -1.71
VEGFA-223	ENST00000523125	TNP1	P09430	55 aa		4.35	□□□□□ -1.71
VEGFA-223	ENST00000523125	LCE1D	Q5T752	114 aa		4.34	□□□□□ -1.71
VEGFA-223	ENST00000523125	KRTAP4-3	Q9BYR4	195 aa		4.32	□□□□□ -1.72

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