RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CXCL6P80162 114 aa4.15□□□□□ -1.75
CTNNA1-234ENST00000522227 C14orf144Q96I85 54 aa4.15□□□□□ -1.75
CTNNA1-234ENST00000522227 R4GN34 69 aa4.15□□□□□ -1.75
CTNNA1-234ENST00000522227 K7ERJ3 54 aa4.13□□□□□ -1.75
CTNNA1-234ENST00000522227 HIST3H2BBQ8N257 126 aa4.13□□□□□ -1.75
CTNNA1-234ENST00000522227 Q8N9L7 120 aa4.12□□□□□ -1.75
CTNNA1-234ENST00000522227 M0QZ58 72 aa4.11□□□□□ -1.75
CTNNA1-234ENST00000522227 DLEU1O43261 78 aa4.11□□□□□ -1.75
CTNNA1-234ENST00000522227 NDUFC1O43677 76 aa4.11□□□□□ -1.75
CTNNA1-234ENST00000522227 MT1EP04732 61 aa4.11□□□□□ -1.75
CTNNA1-234ENST00000522227 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CTNNA1-234ENST00000522227 A0A1B0GW54 56 aa4.1□□□□□ -1.75
CTNNA1-234ENST00000522227 KRTAP19-7Q3SYF9 63 aa4.1□□□□□ -1.75
CTNNA1-234ENST00000522227 HIGD1BQ9P298 99 aa4.1□□□□□ -1.75
CTNNA1-234ENST00000522227 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
CTNNA1-234ENST00000522227 C14orf132Q9NPU4 83 aa4.09□□□□□ -1.75
CTNNA1-234ENST00000522227 SCGB1C2P0DMR2 95 aa4.08□□□□□ -1.76
CTNNA1-234ENST00000522227 BPY2O14599 106 aa4.07□□□□□ -1.76
CTNNA1-234ENST00000522227 PAM16Q9Y3D7 125 aa4.07□□□□□ -1.76
CTNNA1-234ENST00000522227 HIST1H2BLQ99880 126 aa4.06□□□□□ -1.76
CTNNA1-234ENST00000522227 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
CTNNA1-234ENST00000522227 K7EP34 96 aa4.05□□□□□ -1.76
CTNNA1-234ENST00000522227 P0C880 135 aa4.04□□□□□ -1.76
CTNNA1-234ENST00000522227 S100A2P29034 98 aa4.04□□□□□ -1.76
CTNNA1-234ENST00000522227 MT1GP13640 62 aa4.01□□□□□ -1.77
CTNNA1-234ENST00000522227 SPATA45Q537H7 98 aa4□□□□□ -1.77
CTNNA1-234ENST00000522227 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
CTNNA1-234ENST00000522227 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
CTNNA1-234ENST00000522227 BATFQ16520 125 aa3.97□□□□□ -1.77
CTNNA1-234ENST00000522227 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
CTNNA1-234ENST00000522227 MT1MQ8N339 61 aa3.97□□□□□ -1.77
CTNNA1-234ENST00000522227 CYP4F30PQ9H0H9 118 aa3.96□□□□□ -1.78
CTNNA1-234ENST00000522227 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
CTNNA1-234ENST00000522227 S100A1P23297 94 aa3.93□□□□□ -1.78
CTNNA1-234ENST00000522227 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
CTNNA1-234ENST00000522227 HSD52Q0P140 79 aa3.91□□□□□ -1.78
CTNNA1-234ENST00000522227 VAMP8Q9BV40 100 aa3.9□□□□□ -1.79
CTNNA1-234ENST00000522227 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-234ENST00000522227 MT-ATP8P03928 68 aa3.89□□□□□ -1.79
CTNNA1-234ENST00000522227 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
CTNNA1-234ENST00000522227 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CTNNA1-234ENST00000522227 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
CTNNA1-234ENST00000522227 S100A6P06703 90 aa3.86□□□□□ -1.79
CTNNA1-234ENST00000522227 ACYP1P07311 99 aa3.86□□□□□ -1.79
CTNNA1-234ENST00000522227 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-234ENST00000522227 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
CTNNA1-234ENST00000522227 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
CTNNA1-234ENST00000522227 MT1LQ93083 61 aa3.83□□□□□ -1.8
CTNNA1-234ENST00000522227 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
CTNNA1-234ENST00000522227 TMA7Q9Y2S6 64 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-234ENST00000522227 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
CTNNA1-234ENST00000522227 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
CTNNA1-234ENST00000522227 LOC105371267A0A1B0GV96 52 aa3.78□□□□□ -1.8
CTNNA1-234ENST00000522227 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
CTNNA1-234ENST00000522227 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CTNNA1-234ENST00000522227 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
CTNNA1-234ENST00000522227 A0A0D9SG42 100 aa3.75□□□□□ -1.81
CTNNA1-234ENST00000522227 TSTD3H0UI37 97 aa3.75□□□□□ -1.81
CTNNA1-234ENST00000522227 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
CTNNA1-234ENST00000522227 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
CTNNA1-234ENST00000522227 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
CTNNA1-234ENST00000522227 UBL5Q9BZL1 73 aa3.68□□□□□ -1.82
CTNNA1-234ENST00000522227 PYY3Q5JQD4 70 aa3.66□□□□□ -1.82
CTNNA1-234ENST00000522227 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
CTNNA1-234ENST00000522227 H0Y9P7 68 aa3.64□□□□□ -1.83
CTNNA1-234ENST00000522227 UQCR10Q9UDW1 63 aa3.63□□□□□ -1.83
CTNNA1-234ENST00000522227 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
CTNNA1-234ENST00000522227 H3BT86 120 aa3.62□□□□□ -1.83
CTNNA1-234ENST00000522227 SMIM6P0DI80 62 aa3.61□□□□□ -1.83
CTNNA1-234ENST00000522227 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CTNNA1-234ENST00000522227 M0R143 59 aa3.57□□□□□ -1.84
CTNNA1-234ENST00000522227 PCP4L1A6NKN8 68 aa3.56□□□□□ -1.84
CTNNA1-234ENST00000522227 ATOX1O00244 68 aa3.56□□□□□ -1.84
CTNNA1-234ENST00000522227 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
CTNNA1-234ENST00000522227 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
CTNNA1-234ENST00000522227 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
CTNNA1-234ENST00000522227 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
CTNNA1-234ENST00000522227 UQCRQO14949 82 aa3.53□□□□□ -1.84
CTNNA1-234ENST00000522227 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
CTNNA1-234ENST00000522227 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CTNNA1-234ENST00000522227 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CTNNA1-234ENST00000522227 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
CTNNA1-234ENST00000522227 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
CTNNA1-234ENST00000522227 PCP4P48539 62 aa3.43□□□□□ -1.86
CTNNA1-234ENST00000522227 A0A1B0GV90 55 aa3.41□□□□□ -1.86
CTNNA1-234ENST00000522227 C9orf118A6NHY6 69 aa3.41□□□□□ -1.86
CTNNA1-234ENST00000522227 COL5A1-AS1Q5SY13 56 aa3.38□□□□□ -1.87
CTNNA1-234ENST00000522227 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
CTNNA1-234ENST00000522227 MP68P56378 58 aa3.36□□□□□ -1.87
CTNNA1-234ENST00000522227 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-234ENST00000522227 TRAV7A0A075B6U4 112 aa3.35□□□□□ -1.87
CTNNA1-234ENST00000522227 SPTSSBQ8NFR3 76 aa3.34□□□□□ -1.87
CTNNA1-234ENST00000522227 GTF2H5Q6ZYL4 71 aa3.32□□□□□ -1.88
CTNNA1-234ENST00000522227 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
CTNNA1-234ENST00000522227 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
CTNNA1-234ENST00000522227 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CTNNA1-234ENST00000522227 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
CTNNA1-234ENST00000522227 CHKB-CPT1BH3BT56 60 aa3.26□□□□□ -1.89
CTNNA1-234ENST00000522227 ACYP2P14621 99 aa3.26□□□□□ -1.89
CTNNA1-234ENST00000522227 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms