RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MT-ATP8P03928 68 aa9.46□□□□□ -0.9
TRIM35-203ENST00000521253 MP68P56378 58 aa9.45□□□□□ -0.9
TRIM35-203ENST00000521253 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
TRIM35-203ENST00000521253 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
TRIM35-203ENST00000521253 KRTAP19-6Q3LI70 58 aa9.42□□□□□ -0.9
TRIM35-203ENST00000521253 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
TRIM35-203ENST00000521253 A8MUN3 132 aa9.36□□□□□ -0.91
TRIM35-203ENST00000521253 H3BPC8 53 aa9.32□□□□□ -0.92
TRIM35-203ENST00000521253 NDUFC1O43677 76 aa9.32□□□□□ -0.92
TRIM35-203ENST00000521253 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
TRIM35-203ENST00000521253 MT1BP07438 61 aa9.22□□□□□ -0.93
TRIM35-203ENST00000521253 KRTAP19-8Q3LI54 63 aa9.22□□□□□ -0.93
TRIM35-203ENST00000521253 Q5VV11 94 aa9.21□□□□□ -0.94
TRIM35-203ENST00000521253 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.94
TRIM35-203ENST00000521253 H0YAA0 97 aa9.2□□□□□ -0.94
TRIM35-203ENST00000521253 SYNE2Q8WXH0 6885 aaKnown RBP9.18□□□□□ -0.94
TRIM35-203ENST00000521253 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
TRIM35-203ENST00000521253 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
TRIM35-203ENST00000521253 SMIM20Q8N5G0 67 aa9.14□□□□□ -0.95
TRIM35-203ENST00000521253 TRAV7A0A075B6U4 112 aa9.13□□□□□ -0.95
TRIM35-203ENST00000521253 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
TRIM35-203ENST00000521253 A6NN06 94 aa9.04□□□□□ -0.96
TRIM35-203ENST00000521253 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
TRIM35-203ENST00000521253 ACYP2P14621 99 aa8.96□□□□□ -0.98
TRIM35-203ENST00000521253 KRTAP10-5P60370 271 aa8.96□□□□□ -0.98
TRIM35-203ENST00000521253 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.98
TRIM35-203ENST00000521253 P0C880 135 aa8.95□□□□□ -0.98
TRIM35-203ENST00000521253 SNURFQ9Y675 71 aa8.95□□□□□ -0.98
TRIM35-203ENST00000521253 COX7CP15954 63 aa8.94□□□□□ -0.98
TRIM35-203ENST00000521253 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
TRIM35-203ENST00000521253 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
TRIM35-203ENST00000521253 R4GN34 69 aa8.87□□□□□ -0.99
TRIM35-203ENST00000521253 KRTAP6-3Q3LI67 103 aa8.84□□□□□ -0.99
TRIM35-203ENST00000521253 M0QZ58 72 aa8.81□□□□□ -1
TRIM35-203ENST00000521253 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
TRIM35-203ENST00000521253 CHKB-CPT1BH3BT56 60 aa8.79□□□□□ -1
TRIM35-203ENST00000521253 SPANXA2-OT1Q8N9U9 137 aa8.79□□□□□ -1
TRIM35-203ENST00000521253 PLAC4Q8WY50 150 aa8.74□□□□□ -1.01
TRIM35-203ENST00000521253 CCDC179H3BU77 68 aa8.73□□□□□ -1.01
TRIM35-203ENST00000521253 MT1XP80297 61 aa8.69□□□□□ -1.02
TRIM35-203ENST00000521253 PCP4P48539 62 aa8.68□□□□□ -1.02
TRIM35-203ENST00000521253 LINC01554Q52M75 96 aa8.68□□□□□ -1.02
TRIM35-203ENST00000521253 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
TRIM35-203ENST00000521253 NEBP20929 6669 aa8.65□□□□□ -1.02
TRIM35-203ENST00000521253 H7BZZ5 65 aa8.63□□□□□ -1.03
TRIM35-203ENST00000521253 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
TRIM35-203ENST00000521253 MUC12Q9UKN1 5478 aa8.57□□□□□ -1.04
TRIM35-203ENST00000521253 COA5Q86WW8 74 aa8.55□□□□□ -1.04
TRIM35-203ENST00000521253 KRTAP5-9P26371 169 aa8.51□□□□□ -1.05
TRIM35-203ENST00000521253 KMT2DO14686 5537 aa8.49□□□□□ -1.05
TRIM35-203ENST00000521253 TMEM258P61165 79 aa8.48□□□□□ -1.05
TRIM35-203ENST00000521253 ATP5EP56381 51 aaPredicted RBP8.46□□□□□ -1.06
TRIM35-203ENST00000521253 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
TRIM35-203ENST00000521253 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
TRIM35-203ENST00000521253 MDN1Q9NU22 5596 aa8.37□□□□□ -1.07
TRIM35-203ENST00000521253 SEC61GP60059 68 aa8.33□□□□□ -1.08
TRIM35-203ENST00000521253 KRTAP8-1Q8IUC2 63 aa8.32□□□□□ -1.08
TRIM35-203ENST00000521253 SERP1Q9Y6X1 66 aa8.32□□□□□ -1.08
TRIM35-203ENST00000521253 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
TRIM35-203ENST00000521253 KRTAP10-7P60409 375 aaPredicted RBP8.29□□□□□ -1.08
TRIM35-203ENST00000521253 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
TRIM35-203ENST00000521253 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
TRIM35-203ENST00000521253 KRTAP20-1Q3LI63 56 aa8.25□□□□□ -1.09
TRIM35-203ENST00000521253 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
TRIM35-203ENST00000521253 A0A1B0GU33 70 aa8.19□□□□□ -1.1
TRIM35-203ENST00000521253 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
TRIM35-203ENST00000521253 A0A0D9SG42 100 aa8.18□□□□□ -1.1
TRIM35-203ENST00000521253 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
TRIM35-203ENST00000521253 SPRR2EP22531 72 aa8.13□□□□□ -1.11
TRIM35-203ENST00000521253 SPRR2BP35325 72 aa8.13□□□□□ -1.11
TRIM35-203ENST00000521253 SPRR2AP35326 72 aa8.13□□□□□ -1.11
TRIM35-203ENST00000521253 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
TRIM35-203ENST00000521253 A0A1B0GU69 56 aa8.1□□□□□ -1.11
TRIM35-203ENST00000521253 LCE1AQ5T7P2 110 aa8.06□□□□□ -1.12
TRIM35-203ENST00000521253 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
TRIM35-203ENST00000521253 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
TRIM35-203ENST00000521253 KRTAP2-3P0C7H8 128 aa8□□□□□ -1.13
TRIM35-203ENST00000521253 KRTAP2-4Q9BYR9 128 aa8□□□□□ -1.13
TRIM35-203ENST00000521253 SMIM26A0A096LP01 95 aa7.98□□□□□ -1.13
TRIM35-203ENST00000521253 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
TRIM35-203ENST00000521253 A8MU10 97 aa7.92□□□□□ -1.14
TRIM35-203ENST00000521253 V9GYY9 64 aa7.92□□□□□ -1.14
TRIM35-203ENST00000521253 Q1T7F1 81 aa7.89□□□□□ -1.15
TRIM35-203ENST00000521253 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
TRIM35-203ENST00000521253 SPRR2DP22532 72 aa7.86□□□□□ -1.15
TRIM35-203ENST00000521253 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
TRIM35-203ENST00000521253 KRTAP2-2Q9BYT5 123 aa7.73□□□□□ -1.17
TRIM35-203ENST00000521253 KRTAP2-1Q9BYU5 128 aa7.73□□□□□ -1.17
TRIM35-203ENST00000521253 MT1EP04732 61 aa7.69□□□□□ -1.18
TRIM35-203ENST00000521253 PSPHP1O15172 72 aa7.68□□□□□ -1.18
TRIM35-203ENST00000521253 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
TRIM35-203ENST00000521253 UQCR11O14957 56 aa7.64□□□□□ -1.19
TRIM35-203ENST00000521253 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
TRIM35-203ENST00000521253 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
TRIM35-203ENST00000521253 LCE5AQ5TCM9 118 aa7.59□□□□□ -1.19
TRIM35-203ENST00000521253 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
TRIM35-203ENST00000521253 TNP1P09430 55 aa7.57□□□□□ -1.2
TRIM35-203ENST00000521253 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
TRIM35-203ENST00000521253 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
TRIM35-203ENST00000521253 A6NED7 52 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms