RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 PCP4P48539 62 aa11.06□□□□□ -0.64
ARFGAP1-214ENST00000520485 KRTAP10-6P60371 365 aaPredicted RBP11.06□□□□□ -0.64
ARFGAP1-214ENST00000520485 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
ARFGAP1-214ENST00000520485 ACYP2P14621 99 aa11.03□□□□□ -0.64
ARFGAP1-214ENST00000520485 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
ARFGAP1-214ENST00000520485 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
ARFGAP1-214ENST00000520485 CHKB-CPT1BH3BT56 60 aa10.89□□□□□ -0.67
ARFGAP1-214ENST00000520485 COA5Q86WW8 74 aa10.88□□□□□ -0.67
ARFGAP1-214ENST00000520485 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
ARFGAP1-214ENST00000520485 MT2AP02795 61 aa10.84□□□□□ -0.67
ARFGAP1-214ENST00000520485 TMEM258P61165 79 aa10.84□□□□□ -0.67
ARFGAP1-214ENST00000520485 ATP5EP56381 51 aaPredicted RBP10.79□□□□□ -0.68
ARFGAP1-214ENST00000520485 MT1FP04733 61 aa10.79□□□□□ -0.68
ARFGAP1-214ENST00000520485 KRTAP10-10P60014 251 aa10.71□□□□□ -0.69
ARFGAP1-214ENST00000520485 SPTSSBQ8NFR3 76 aa10.71□□□□□ -0.69
ARFGAP1-214ENST00000520485 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
ARFGAP1-214ENST00000520485 H0YAA0 97 aa10.58□□□□□ -0.72
ARFGAP1-214ENST00000520485 P0C880 135 aa10.53□□□□□ -0.72
ARFGAP1-214ENST00000520485 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
ARFGAP1-214ENST00000520485 KRTAP9-3Q9BYQ3 159 aa10.51□□□□□ -0.73
ARFGAP1-214ENST00000520485 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
ARFGAP1-214ENST00000520485 LCE2DQ5TA82 110 aaPredicted RBP10.42□□□□□ -0.74
ARFGAP1-214ENST00000520485 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
ARFGAP1-214ENST00000520485 KRTAP19-1Q8IUB9 90 aa10.35□□□□□ -0.75
ARFGAP1-214ENST00000520485 LCE2BO14633 110 aa10.34□□□□□ -0.75
ARFGAP1-214ENST00000520485 SEC61GP60059 68 aa10.32□□□□□ -0.76
ARFGAP1-214ENST00000520485 CRIPTQ9P021 101 aa10.31□□□□□ -0.76
ARFGAP1-214ENST00000520485 SPRR2GQ9BYE4 73 aa10.28□□□□□ -0.76
ARFGAP1-214ENST00000520485 A0A1B0GU69 56 aa10.27□□□□□ -0.77
ARFGAP1-214ENST00000520485 M0QZ58 72 aa10.27□□□□□ -0.77
ARFGAP1-214ENST00000520485 R4GN34 69 aa10.27□□□□□ -0.77
ARFGAP1-214ENST00000520485 USH2AO75445 5202 aa10.27□□□□□ -0.77
ARFGAP1-214ENST00000520485 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
ARFGAP1-214ENST00000520485 RPS28P62857 69 aaKnown RBP10.16□□□□□ -0.78
ARFGAP1-214ENST00000520485 KRTAP13-4Q3LI77 160 aa10.16□□□□□ -0.78
ARFGAP1-214ENST00000520485 FSIP2Q5CZC0 6907 aa10.15□□□□□ -0.78
ARFGAP1-214ENST00000520485 SMIM26A0A096LP01 95 aa10.13□□□□□ -0.79
ARFGAP1-214ENST00000520485 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
ARFGAP1-214ENST00000520485 PRR15LQ9BU68 103 aa10.12□□□□□ -0.79
ARFGAP1-214ENST00000520485 A0A1B0GU33 70 aa10.11□□□□□ -0.79
ARFGAP1-214ENST00000520485 KRTAP19-8Q3LI54 63 aa10.1□□□□□ -0.79
ARFGAP1-214ENST00000520485 MT1BP07438 61 aa10.07□□□□□ -0.8
ARFGAP1-214ENST00000520485 Q5VV11 94 aa10.07□□□□□ -0.8
ARFGAP1-214ENST00000520485 Q1T7F1 81 aa10.06□□□□□ -0.8
ARFGAP1-214ENST00000520485 SPATA8Q6RVD6 105 aa10.06□□□□□ -0.8
ARFGAP1-214ENST00000520485 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
ARFGAP1-214ENST00000520485 PSPHP1O15172 72 aa10.02□□□□□ -0.8
ARFGAP1-214ENST00000520485 V9GYY9 64 aa10.02□□□□□ -0.8
ARFGAP1-214ENST00000520485 A0A0D9SG42 100 aa9.95□□□□□ -0.82
ARFGAP1-214ENST00000520485 CRCT1Q9UGL9 99 aa9.9□□□□□ -0.82
ARFGAP1-214ENST00000520485 A8MU10 97 aa9.86□□□□□ -0.83
ARFGAP1-214ENST00000520485 PLAC4Q8WY50 150 aa9.84□□□□□ -0.83
ARFGAP1-214ENST00000520485 UQCR11O14957 56 aa9.82□□□□□ -0.84
ARFGAP1-214ENST00000520485 KRTAP19-6Q3LI70 58 aa9.77□□□□□ -0.84
ARFGAP1-214ENST00000520485 KRTAP9-6A0A140TA67 174 aa9.76□□□□□ -0.85
ARFGAP1-214ENST00000520485 A6NN06 94 aa9.76□□□□□ -0.85
ARFGAP1-214ENST00000520485 MIR22HGQ0VDD5 57 aa9.72□□□□□ -0.85
ARFGAP1-214ENST00000520485 SPINT4Q6UDR6 99 aa9.72□□□□□ -0.85
ARFGAP1-214ENST00000520485 KRTAP12-1P59990 96 aa9.69□□□□□ -0.86
ARFGAP1-214ENST00000520485 A6NED7 52 aa9.68□□□□□ -0.86
ARFGAP1-214ENST00000520485 KRTAP12-2P59991 146 aa9.67□□□□□ -0.86
ARFGAP1-214ENST00000520485 FCGBPQ9Y6R7 5405 aaPredicted RBP9.65□□□□□ -0.86
ARFGAP1-214ENST00000520485 KRTAP10-5P60370 271 aa9.63□□□□□ -0.87
ARFGAP1-214ENST00000520485 MT1XP80297 61 aa9.62□□□□□ -0.87
ARFGAP1-214ENST00000520485 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
ARFGAP1-214ENST00000520485 PRO2289Q9P1D8 64 aa9.51□□□□□ -0.89
ARFGAP1-214ENST00000520485 CDC42SE1Q9NRR8 79 aa9.39□□□□□ -0.91
ARFGAP1-214ENST00000520485 K7ERS5 55 aa9.31□□□□□ -0.92
ARFGAP1-214ENST00000520485 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
ARFGAP1-214ENST00000520485 MACF1Q9UPN3 7388 aaKnown RBP9.21□□□□□ -0.93
ARFGAP1-214ENST00000520485 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.21□□□□□ -0.93
ARFGAP1-214ENST00000520485 C10orf95Q9H7T3 257 aa9.21□□□□□ -0.93
ARFGAP1-214ENST00000520485 BRK1Q8WUW1 75 aa9.21□□□□□ -0.94
ARFGAP1-214ENST00000520485 KMT2DO14686 5537 aa9.12□□□□□ -0.95
ARFGAP1-214ENST00000520485 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
ARFGAP1-214ENST00000520485 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
ARFGAP1-214ENST00000520485 KRTAP4-8A0A0G2JLE6 195 aa9.02□□□□□ -0.97
ARFGAP1-214ENST00000520485 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.97
ARFGAP1-214ENST00000520485 TNP1P09430 55 aa8.97□□□□□ -0.97
ARFGAP1-214ENST00000520485 ROMO1P60602 79 aa8.88□□□□□ -0.99
ARFGAP1-214ENST00000520485 KRTAP8-1Q8IUC2 63 aa8.88□□□□□ -0.99
ARFGAP1-214ENST00000520485 KRTAP9-7A8MTY7 169 aa8.86□□□□□ -0.99
ARFGAP1-214ENST00000520485 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
ARFGAP1-214ENST00000520485 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
ARFGAP1-214ENST00000520485 KRTAP6-3Q3LI67 103 aa8.78□□□□□ -1
ARFGAP1-214ENST00000520485 LCE3AQ5TA76 89 aa8.78□□□□□ -1
ARFGAP1-214ENST00000520485 SPRR2FQ96RM1 72 aa8.7□□□□□ -1.02
ARFGAP1-214ENST00000520485 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
ARFGAP1-214ENST00000520485 PMAIP1Q13794 54 aa8.64□□□□□ -1.03
ARFGAP1-214ENST00000520485 MUC12Q9UKN1 5478 aa8.62□□□□□ -1.03
ARFGAP1-214ENST00000520485 KRTAP19-5Q3LI72 72 aa8.59□□□□□ -1.03
ARFGAP1-214ENST00000520485 KRTAP19-7Q3SYF9 63 aa8.58□□□□□ -1.04
ARFGAP1-214ENST00000520485 MDN1Q9NU22 5596 aa8.49□□□□□ -1.05
ARFGAP1-214ENST00000520485 MT1EP04732 61 aa8.47□□□□□ -1.05
ARFGAP1-214ENST00000520485 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
ARFGAP1-214ENST00000520485 SPRR2EP22531 72 aa8.39□□□□□ -1.07
ARFGAP1-214ENST00000520485 SPRR2BP35325 72 aa8.39□□□□□ -1.07
ARFGAP1-214ENST00000520485 SPRR2AP35326 72 aa8.39□□□□□ -1.07
ARFGAP1-214ENST00000520485 KRTAP12-3P60328 96 aa8.39□□□□□ -1.07
ARFGAP1-214ENST00000520485 NEBP20929 6669 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms