RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 NDUFC1O43677 76 aa10.56□□□□□ -0.72
SKP1-206ENST00000519321 KRTAP9-6A0A140TA67 174 aa10.54□□□□□ -0.72
SKP1-206ENST00000519321 SERP2Q8N6R1 65 aa10.54□□□□□ -0.72
SKP1-206ENST00000519321 CRCT1Q9UGL9 99 aa10.53□□□□□ -0.72
SKP1-206ENST00000519321 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
SKP1-206ENST00000519321 SNURFQ9Y675 71 aa10.45□□□□□ -0.74
SKP1-206ENST00000519321 LCE2BO14633 110 aa10.43□□□□□ -0.74
SKP1-206ENST00000519321 C20orf197Q8N268 126 aa10.42□□□□□ -0.74
SKP1-206ENST00000519321 ACYP2P14621 99 aa10.38□□□□□ -0.75
SKP1-206ENST00000519321 H0YAA0 97 aa10.36□□□□□ -0.75
SKP1-206ENST00000519321 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
SKP1-206ENST00000519321 COX7CP15954 63 aa10.32□□□□□ -0.76
SKP1-206ENST00000519321 SPANXA2-OT1Q8N9U9 137 aa10.32□□□□□ -0.76
SKP1-206ENST00000519321 CRIPTQ9P021 101 aa10.27□□□□□ -0.77
SKP1-206ENST00000519321 USH2AO75445 5202 aa10.24□□□□□ -0.77
SKP1-206ENST00000519321 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
SKP1-206ENST00000519321 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
SKP1-206ENST00000519321 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.77
SKP1-206ENST00000519321 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.77
SKP1-206ENST00000519321 CHKB-CPT1BH3BT56 60 aa10.19□□□□□ -0.78
SKP1-206ENST00000519321 ANAPC13Q9BS18 74 aa10.17□□□□□ -0.78
SKP1-206ENST00000519321 SSPOA2VEC9 5147 aa10.08□□□□□ -0.8
SKP1-206ENST00000519321 KRTAP19-8Q3LI54 63 aa10.07□□□□□ -0.8
SKP1-206ENST00000519321 Q5VV11 94 aa10.07□□□□□ -0.8
SKP1-206ENST00000519321 KRTAP19-6Q3LI70 58 aa10.06□□□□□ -0.8
SKP1-206ENST00000519321 H7BZZ5 65 aa10.05□□□□□ -0.8
SKP1-206ENST00000519321 P0C880 135 aa9.99□□□□□ -0.81
SKP1-206ENST00000519321 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
SKP1-206ENST00000519321 MT1BP07438 61 aa9.98□□□□□ -0.81
SKP1-206ENST00000519321 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
SKP1-206ENST00000519321 COA5Q86WW8 74 aa9.97□□□□□ -0.81
SKP1-206ENST00000519321 R4GN34 69 aa9.96□□□□□ -0.82
SKP1-206ENST00000519321 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
SKP1-206ENST00000519321 M0QZ58 72 aa9.87□□□□□ -0.83
SKP1-206ENST00000519321 FCGBPQ9Y6R7 5405 aaPredicted RBP9.8□□□□□ -0.84
SKP1-206ENST00000519321 A6NN06 94 aa9.77□□□□□ -0.85
SKP1-206ENST00000519321 ATP5EP56381 51 aaPredicted RBP9.77□□□□□ -0.85
SKP1-206ENST00000519321 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.76□□□□□ -0.85
SKP1-206ENST00000519321 PLAC4Q8WY50 150 aa9.73□□□□□ -0.85
SKP1-206ENST00000519321 SEC61GP60059 68 aa9.72□□□□□ -0.85
SKP1-206ENST00000519321 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
SKP1-206ENST00000519321 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
SKP1-206ENST00000519321 SERP1Q9Y6X1 66 aa9.68□□□□□ -0.86
SKP1-206ENST00000519321 TMEM258P61165 79 aa9.63□□□□□ -0.87
SKP1-206ENST00000519321 PRO2289Q9P1D8 64 aa9.58□□□□□ -0.88
SKP1-206ENST00000519321 KRTAP9-7A8MTY7 169 aa9.53□□□□□ -0.88
SKP1-206ENST00000519321 A0A1B0GU69 56 aa9.48□□□□□ -0.89
SKP1-206ENST00000519321 KRTAP13-4Q3LI77 160 aa9.48□□□□□ -0.89
SKP1-206ENST00000519321 A0A1B0GU33 70 aa9.46□□□□□ -0.9
SKP1-206ENST00000519321 MT1XP80297 61 aa9.46□□□□□ -0.9
SKP1-206ENST00000519321 MACF1Q9UPN3 7388 aaKnown RBP9.39□□□□□ -0.91
SKP1-206ENST00000519321 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
SKP1-206ENST00000519321 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
SKP1-206ENST00000519321 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
SKP1-206ENST00000519321 KRTAP6-3Q3LI67 103 aa9.3□□□□□ -0.92
SKP1-206ENST00000519321 A0A0D9SG42 100 aa9.28□□□□□ -0.92
SKP1-206ENST00000519321 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
SKP1-206ENST00000519321 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
SKP1-206ENST00000519321 KRTAP12-2P59991 146 aa9.21□□□□□ -0.94
SKP1-206ENST00000519321 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
SKP1-206ENST00000519321 PCP4P48539 62 aa9.14□□□□□ -0.95
SKP1-206ENST00000519321 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
SKP1-206ENST00000519321 KRTAP12-1P59990 96 aa9.1□□□□□ -0.95
SKP1-206ENST00000519321 V9GYY9 64 aa9.08□□□□□ -0.96
SKP1-206ENST00000519321 A8MU10 97 aa9.05□□□□□ -0.96
SKP1-206ENST00000519321 UQCR11O14957 56 aa9.03□□□□□ -0.96
SKP1-206ENST00000519321 KRTAP5-9P26371 169 aa9.03□□□□□ -0.96
SKP1-206ENST00000519321 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
SKP1-206ENST00000519321 KRTAP10-12P60413 245 aa9.02□□□□□ -0.97
SKP1-206ENST00000519321 Q1T7F1 81 aa8.98□□□□□ -0.97
SKP1-206ENST00000519321 KRTAP8-1Q8IUC2 63 aa8.98□□□□□ -0.97
SKP1-206ENST00000519321 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
SKP1-206ENST00000519321 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
SKP1-206ENST00000519321 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
SKP1-206ENST00000519321 PSPHP1O15172 72 aa8.87□□□□□ -0.99
SKP1-206ENST00000519321 SPRR2FQ96RM1 72 aa8.86□□□□□ -0.99
SKP1-206ENST00000519321 KMT2DO14686 5537 aa8.85□□□□□ -0.99
SKP1-206ENST00000519321 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
SKP1-206ENST00000519321 MUC12Q9UKN1 5478 aa8.71□□□□□ -1.01
SKP1-206ENST00000519321 K7ERS5 55 aa8.67□□□□□ -1.02
SKP1-206ENST00000519321 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
SKP1-206ENST00000519321 A6NED7 52 aa8.63□□□□□ -1.03
SKP1-206ENST00000519321 TNP1P09430 55 aa8.63□□□□□ -1.03
SKP1-206ENST00000519321 SPRR2EP22531 72 aa8.63□□□□□ -1.03
SKP1-206ENST00000519321 SPRR2BP35325 72 aa8.63□□□□□ -1.03
SKP1-206ENST00000519321 SPRR2AP35326 72 aa8.63□□□□□ -1.03
SKP1-206ENST00000519321 NEBP20929 6669 aa8.6□□□□□ -1.03
SKP1-206ENST00000519321 LCE1AQ5T7P2 110 aa8.56□□□□□ -1.04
SKP1-206ENST00000519321 MDN1Q9NU22 5596 aa8.49□□□□□ -1.05
SKP1-206ENST00000519321 KRTAP19-7Q3SYF9 63 aa8.44□□□□□ -1.06
SKP1-206ENST00000519321 KRTAP20-1Q3LI63 56 aa8.42□□□□□ -1.06
SKP1-206ENST00000519321 MT1EP04732 61 aa8.37□□□□□ -1.07
SKP1-206ENST00000519321 LCE3AQ5TA76 89 aa8.37□□□□□ -1.07
SKP1-206ENST00000519321 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
SKP1-206ENST00000519321 KRTAP19-5Q3LI72 72 aa8.35□□□□□ -1.07
SKP1-206ENST00000519321 SPRR2DP22532 72 aa8.34□□□□□ -1.07
SKP1-206ENST00000519321 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
SKP1-206ENST00000519321 KRTAP2-3P0C7H8 128 aa8.32□□□□□ -1.08
SKP1-206ENST00000519321 KRTAP2-4Q9BYR9 128 aa8.32□□□□□ -1.08
SKP1-206ENST00000519321 KRTAP19-3Q7Z4W3 81 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms