RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 SPINK1P00995 79 aa5.68□□□□□ -1.5
SH2D4A-204ENST00000519207 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SH2D4A-204ENST00000519207 Q5VSD8 79 aa5.68□□□□□ -1.5
SH2D4A-204ENST00000519207 SMR3BP02814 79 aaPredicted RBP5.67□□□□□ -1.5
SH2D4A-204ENST00000519207 ROMO1P60602 79 aa5.67□□□□□ -1.5
SH2D4A-204ENST00000519207 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
SH2D4A-204ENST00000519207 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
SH2D4A-204ENST00000519207 A8MUU9 505 aa5.65□□□□□ -1.51
SH2D4A-204ENST00000519207 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
SH2D4A-204ENST00000519207 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
SH2D4A-204ENST00000519207 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
SH2D4A-204ENST00000519207 H0YAA0 97 aa5.55□□□□□ -1.52
SH2D4A-204ENST00000519207 P0C880 135 aa5.53□□□□□ -1.52
SH2D4A-204ENST00000519207 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
SH2D4A-204ENST00000519207 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
SH2D4A-204ENST00000519207 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
SH2D4A-204ENST00000519207 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
SH2D4A-204ENST00000519207 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
SH2D4A-204ENST00000519207 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.54
SH2D4A-204ENST00000519207 FAT3Q8TDW7 4589 aa5.44□□□□□ -1.54
SH2D4A-204ENST00000519207 C9orf92A6NGG3 77 aa5.43□□□□□ -1.54
SH2D4A-204ENST00000519207 A0A1B0GU33 70 aa5.4□□□□□ -1.54
SH2D4A-204ENST00000519207 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.55
SH2D4A-204ENST00000519207 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
SH2D4A-204ENST00000519207 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
SH2D4A-204ENST00000519207 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SH2D4A-204ENST00000519207 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
SH2D4A-204ENST00000519207 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
SH2D4A-204ENST00000519207 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
SH2D4A-204ENST00000519207 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
SH2D4A-204ENST00000519207 LRP2P98164 4655 aa5.32□□□□□ -1.56
SH2D4A-204ENST00000519207 TNXBP22105 4242 aa5.3□□□□□ -1.56
SH2D4A-204ENST00000519207 K7ERS5 55 aa5.29□□□□□ -1.56
SH2D4A-204ENST00000519207 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
SH2D4A-204ENST00000519207 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
SH2D4A-204ENST00000519207 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
SH2D4A-204ENST00000519207 XP32Q5T750 250 aa5.24□□□□□ -1.57
SH2D4A-204ENST00000519207 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
SH2D4A-204ENST00000519207 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
SH2D4A-204ENST00000519207 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
SH2D4A-204ENST00000519207 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SH2D4A-204ENST00000519207 LPAP08519 4548 aa5.15□□□□□ -1.58
SH2D4A-204ENST00000519207 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
SH2D4A-204ENST00000519207 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
SH2D4A-204ENST00000519207 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
SH2D4A-204ENST00000519207 MUC2Q02817 5179 aa5.1□□□□□ -1.59
SH2D4A-204ENST00000519207 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
SH2D4A-204ENST00000519207 S4R3F8 94 aa5.09□□□□□ -1.59
SH2D4A-204ENST00000519207 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
SH2D4A-204ENST00000519207 A0A0D9SG42 100 aa4.98□□□□□ -1.61
SH2D4A-204ENST00000519207 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SH2D4A-204ENST00000519207 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
SH2D4A-204ENST00000519207 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
SH2D4A-204ENST00000519207 KRTAP9-2Q9BYQ4 174 aa4.91□□□□□ -1.62
SH2D4A-204ENST00000519207 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
SH2D4A-204ENST00000519207 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
SH2D4A-204ENST00000519207 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
SH2D4A-204ENST00000519207 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
SH2D4A-204ENST00000519207 M0QZ58 72 aa4.87□□□□□ -1.63
SH2D4A-204ENST00000519207 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
SH2D4A-204ENST00000519207 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
SH2D4A-204ENST00000519207 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
SH2D4A-204ENST00000519207 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
SH2D4A-204ENST00000519207 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
SH2D4A-204ENST00000519207 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
SH2D4A-204ENST00000519207 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
SH2D4A-204ENST00000519207 KRTAP4-1Q9BYQ7 146 aa4.74□□□□□ -1.65
SH2D4A-204ENST00000519207 R4GN34 69 aa4.71□□□□□ -1.66
SH2D4A-204ENST00000519207 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
SH2D4A-204ENST00000519207 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
SH2D4A-204ENST00000519207 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
SH2D4A-204ENST00000519207 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
SH2D4A-204ENST00000519207 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
SH2D4A-204ENST00000519207 MT1HP80294 61 aa4.58□□□□□ -1.68
SH2D4A-204ENST00000519207 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
SH2D4A-204ENST00000519207 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
SH2D4A-204ENST00000519207 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
SH2D4A-204ENST00000519207 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
SH2D4A-204ENST00000519207 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
SH2D4A-204ENST00000519207 M0R2T5 61 aa4.47□□□□□ -1.69
SH2D4A-204ENST00000519207 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
SH2D4A-204ENST00000519207 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
SH2D4A-204ENST00000519207 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
SH2D4A-204ENST00000519207 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
SH2D4A-204ENST00000519207 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
SH2D4A-204ENST00000519207 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
SH2D4A-204ENST00000519207 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
SH2D4A-204ENST00000519207 USH2AO75445 5202 aa4.32□□□□□ -1.72
SH2D4A-204ENST00000519207 TNP1P09430 55 aa4.32□□□□□ -1.72
SH2D4A-204ENST00000519207 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
SH2D4A-204ENST00000519207 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SH2D4A-204ENST00000519207 INE1O15225 51 aa4.27□□□□□ -1.73
SH2D4A-204ENST00000519207 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SH2D4A-204ENST00000519207 MT2AP02795 61 aa4.23□□□□□ -1.73
SH2D4A-204ENST00000519207 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
SH2D4A-204ENST00000519207 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
SH2D4A-204ENST00000519207 MT1FP04733 61 aa4.21□□□□□ -1.74
SH2D4A-204ENST00000519207 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
SH2D4A-204ENST00000519207 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
SH2D4A-204ENST00000519207 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms