RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CTNNA1-205ENST00000517904 C14orf132Q9NPU4 83 aa4.88□□□□□ -1.63
CTNNA1-205ENST00000517904 PDE6GP18545 87 aa4.86□□□□□ -1.63
CTNNA1-205ENST00000517904 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
CTNNA1-205ENST00000517904 SPRR2DP22532 72 aa4.82□□□□□ -1.64
CTNNA1-205ENST00000517904 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
CTNNA1-205ENST00000517904 C1orf64Q8NEQ6 169 aa4.82□□□□□ -1.64
CTNNA1-205ENST00000517904 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
CTNNA1-205ENST00000517904 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
CTNNA1-205ENST00000517904 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
CTNNA1-205ENST00000517904 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
CTNNA1-205ENST00000517904 Q8N9L7 120 aa4.79□□□□□ -1.64
CTNNA1-205ENST00000517904 CXCL6P80162 114 aa4.78□□□□□ -1.64
CTNNA1-205ENST00000517904 MT1XP80297 61 aa4.78□□□□□ -1.64
CTNNA1-205ENST00000517904 BPY2O14599 106 aa4.77□□□□□ -1.65
CTNNA1-205ENST00000517904 NAA38Q9BRA0 125 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-205ENST00000517904 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CTNNA1-205ENST00000517904 PYY3Q5JQD4 70 aa4.76□□□□□ -1.65
CTNNA1-205ENST00000517904 UQCR10Q9UDW1 63 aa4.75□□□□□ -1.65
CTNNA1-205ENST00000517904 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
CTNNA1-205ENST00000517904 A0A087WVE0 104 aa4.72□□□□□ -1.65
CTNNA1-205ENST00000517904 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
CTNNA1-205ENST00000517904 A8MUN3 132 aa4.64□□□□□ -1.67
CTNNA1-205ENST00000517904 H0YAA0 97 aa4.63□□□□□ -1.67
CTNNA1-205ENST00000517904 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
CTNNA1-205ENST00000517904 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
CTNNA1-205ENST00000517904 H3BT86 120 aa4.6□□□□□ -1.67
CTNNA1-205ENST00000517904 M0R143 59 aa4.59□□□□□ -1.67
CTNNA1-205ENST00000517904 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
CTNNA1-205ENST00000517904 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
CTNNA1-205ENST00000517904 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
CTNNA1-205ENST00000517904 TSTD3H0UI37 97 aa4.56□□□□□ -1.68
CTNNA1-205ENST00000517904 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
CTNNA1-205ENST00000517904 NDUFC1O43677 76 aa4.55□□□□□ -1.68
CTNNA1-205ENST00000517904 K7EP34 96 aa4.53□□□□□ -1.68
CTNNA1-205ENST00000517904 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
CTNNA1-205ENST00000517904 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
CTNNA1-205ENST00000517904 R4GN34 69 aa4.48□□□□□ -1.69
CTNNA1-205ENST00000517904 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
CTNNA1-205ENST00000517904 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
CTNNA1-205ENST00000517904 P0C880 135 aa4.46□□□□□ -1.7
CTNNA1-205ENST00000517904 TRAV22A0A0B4J277 110 aa4.45□□□□□ -1.7
CTNNA1-205ENST00000517904 BATFQ16520 125 aa4.45□□□□□ -1.7
CTNNA1-205ENST00000517904 M0QZ58 72 aa4.44□□□□□ -1.7
CTNNA1-205ENST00000517904 TAX1BP3O14907 124 aa4.42□□□□□ -1.7
CTNNA1-205ENST00000517904 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
CTNNA1-205ENST00000517904 ACYP1P07311 99 aa4.41□□□□□ -1.7
CTNNA1-205ENST00000517904 LINC01554Q52M75 96 aa4.41□□□□□ -1.7
CTNNA1-205ENST00000517904 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
CTNNA1-205ENST00000517904 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
CTNNA1-205ENST00000517904 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
CTNNA1-205ENST00000517904 PRO0461Q9UI25 63 aa4.34□□□□□ -1.71
CTNNA1-205ENST00000517904 H0Y9P7 68 aa4.33□□□□□ -1.72
CTNNA1-205ENST00000517904 ATOX1O00244 68 aa4.31□□□□□ -1.72
CTNNA1-205ENST00000517904 UQCRQO14949 82 aa4.29□□□□□ -1.72
CTNNA1-205ENST00000517904 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
CTNNA1-205ENST00000517904 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
CTNNA1-205ENST00000517904 SMIM6P0DI80 62 aa4.27□□□□□ -1.73
CTNNA1-205ENST00000517904 MT1EP04732 61 aa4.25□□□□□ -1.73
CTNNA1-205ENST00000517904 MT4P47944 62 aa4.25□□□□□ -1.73
CTNNA1-205ENST00000517904 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
CTNNA1-205ENST00000517904 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
CTNNA1-205ENST00000517904 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
CTNNA1-205ENST00000517904 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
CTNNA1-205ENST00000517904 HIST1H4AP62805 103 aaKnown RBP4.18□□□□□ -1.74
CTNNA1-205ENST00000517904 ETDBQ3ZM63 59 aa4.17□□□□□ -1.74
CTNNA1-205ENST00000517904 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
CTNNA1-205ENST00000517904 MT1GP13640 62 aa4.12□□□□□ -1.75
CTNNA1-205ENST00000517904 MP68P56378 58 aa4.12□□□□□ -1.75
CTNNA1-205ENST00000517904 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
CTNNA1-205ENST00000517904 F8W1H4 67 aa4.11□□□□□ -1.75
CTNNA1-205ENST00000517904 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CTNNA1-205ENST00000517904 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
CTNNA1-205ENST00000517904 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
CTNNA1-205ENST00000517904 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
CTNNA1-205ENST00000517904 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
CTNNA1-205ENST00000517904 MT1MQ8N339 61 aa4.08□□□□□ -1.76
CTNNA1-205ENST00000517904 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
CTNNA1-205ENST00000517904 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
CTNNA1-205ENST00000517904 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
CTNNA1-205ENST00000517904 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
CTNNA1-205ENST00000517904 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
CTNNA1-205ENST00000517904 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
CTNNA1-205ENST00000517904 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
CTNNA1-205ENST00000517904 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
CTNNA1-205ENST00000517904 A0A0D9SG42 100 aa4□□□□□ -1.77
CTNNA1-205ENST00000517904 H3BPC8 53 aa4□□□□□ -1.77
CTNNA1-205ENST00000517904 MT1LQ93083 61 aa4□□□□□ -1.77
CTNNA1-205ENST00000517904 LOC105371267A0A1B0GV96 52 aa3.96□□□□□ -1.78
CTNNA1-205ENST00000517904 ACYP2P14621 99 aa3.95□□□□□ -1.78
CTNNA1-205ENST00000517904 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
CTNNA1-205ENST00000517904 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
CTNNA1-205ENST00000517904 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
CTNNA1-205ENST00000517904 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
CTNNA1-205ENST00000517904 PCP4P48539 62 aa3.92□□□□□ -1.78
CTNNA1-205ENST00000517904 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CTNNA1-205ENST00000517904 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
CTNNA1-205ENST00000517904 SCGB1A1P11684 91 aa3.82□□□□□ -1.8
CTNNA1-205ENST00000517904 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
CTNNA1-205ENST00000517904 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms